RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 RSPH10BP0C881 870 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 GNAT1P11488 350 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 HSPA4P34932 840 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 THPOP40225 353 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 TAP1Q03518 808 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 MKRN4PQ13434 485 aaPredicted RBP14.3□□□□□ -0.12
SENP3-204ENST00000580997 MTMR1Q13613 665 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 IKBKEQ14164 716 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 RTN1Q16799 776 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 PPP1R18Q6NYC8 613 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 ZNF713Q8N859 430 aaPredicted RBP14.3□□□□□ -0.12
SENP3-204ENST00000580997 JADE2Q9NQC1 790 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 SETD4Q9NVD3 440 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 ZNF215Q9UL58 517 aaPredicted RBP14.3□□□□□ -0.12
SENP3-204ENST00000580997 V9GY48 417 aaPredicted RBP14.3□□□□□ -0.12
SENP3-204ENST00000580997 KLF18A0A0U1RQI7 1052 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 GSTTP1A0A1W2PQM5 241 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 ARHGEF15O94989 841 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 GJB5O95377 273 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 FOSP01100 380 aaPredicted RBP14.29□□□□□ -0.12
SENP3-204ENST00000580997 IGFBP4P22692 258 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 CDC27P30260 824 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 TCF7P36402 384 aaPredicted RBP14.29□□□□□ -0.12
SENP3-204ENST00000580997 DEFB103AP81534 67 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 RPAINQ86UA6 219 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 TRIM50Q86XT4 487 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 SEPT1Q8WYJ6 367 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 CCDC136Q96JN2 1154 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 BARHL2Q9NY43 387 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 NRCAMQ92823 1304 aa14.29□□□□□ -0.12
SENP3-204ENST00000580997 STXBP3O00186 592 aa14.28□□□□□ -0.12
SENP3-204ENST00000580997 TLL1O43897 1013 aa14.28□□□□□ -0.12
SENP3-204ENST00000580997 ADD1P35611 737 aaKnown RBP14.28□□□□□ -0.12
SENP3-204ENST00000580997 CLK2P49760 499 aaKnown RBP14.28□□□□□ -0.12
SENP3-204ENST00000580997 NAPAP54920 295 aa14.28□□□□□ -0.12
SENP3-204ENST00000580997 PLEKHG4Q58EX7 1191 aa14.28□□□□□ -0.12
SENP3-204ENST00000580997 UTP14CQ5TAP6 766 aaKnown RBP14.28□□□□□ -0.12
SENP3-204ENST00000580997 DBF4BQ8NFT6 615 aa14.28□□□□□ -0.12
SENP3-204ENST00000580997 LMBR1Q8WVP7 490 aa14.28□□□□□ -0.12
SENP3-204ENST00000580997 ATXN2LQ8WWM7 1075 aaKnown RBP14.28□□□□□ -0.12
SENP3-204ENST00000580997 RAD9AQ99638 391 aa14.28□□□□□ -0.12
SENP3-204ENST00000580997 GLT8D2Q9H1C3 349 aa14.28□□□□□ -0.12
SENP3-204ENST00000580997 EHMT1Q9H9B1 1298 aa14.28□□□□□ -0.12
SENP3-204ENST00000580997 PRDM6Q9NQX0 595 aa14.28□□□□□ -0.12
SENP3-204ENST00000580997 KCNH7Q9NS40 1196 aa14.28□□□□□ -0.12
SENP3-204ENST00000580997 CCDC196A0A1B0GTZ2 297 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 SMCO2A6NFE2 343 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 EPOPA6NHQ4 379 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 GOLGA8AA7E2F4 631 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 GOLGA8BA8MQT2 603 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 CPA1P15085 419 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 SP4Q02446 784 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 CEP55Q53EZ4 464 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 FAM26DQ5JW98 314 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 TMCO2Q7Z6W1 182 aaPredicted RBP14.27□□□□□ -0.13
SENP3-204ENST00000580997 CYP2W1Q8TAV3 490 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 PPM1EQ8WY54 764 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 SYMPKQ92797 1274 aaKnown RBP14.27□□□□□ -0.13
SENP3-204ENST00000580997 MXRA8Q9BRK3 442 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 AGXT2Q9BYV1 514 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 ERAP1Q9NZ08 941 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 SNX14Q9Y5W7 946 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 MTCH2Q9Y6C9 303 aa14.27□□□□□ -0.13
SENP3-204ENST00000580997 NID2Q14112 1375 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 LCHNA4D1U4 455 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 MBLAC1A4D2B0 266 aaPredicted RBP14.26□□□□□ -0.13
SENP3-204ENST00000580997 RFXAPO00287 272 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 MEIS1O00470 390 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 EPB41L2O43491 1005 aaKnown RBP14.26□□□□□ -0.13
SENP3-204ENST00000580997 SREBF1P36956 1147 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 METAP2P50579 478 aaKnown RBP eCLIP14.26□□□□□ -0.13
SENP3-204ENST00000580997 ADCY7P51828 1080 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 ARHGAP4P98171 946 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 AP3B2Q13367 1082 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 CCDC85BQ15834 202 aaPredicted RBP14.26□□□□□ -0.13
SENP3-204ENST00000580997 PFKFB3Q16875 520 aaPredicted RBP14.26□□□□□ -0.13
SENP3-204ENST00000580997 TJAP1Q5JTD0 557 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
SENP3-204ENST00000580997 Q6ZUG5 572 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 JAKMIP1Q96N16 626 aaKnown RBP14.26□□□□□ -0.13
SENP3-204ENST00000580997 ZBED2Q9BTP6 218 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 OSBPL7Q9BZF2 842 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 SMARCAD1Q9H4L7 1026 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 CERS4Q9HA82 394 aa14.26□□□□□ -0.13
SENP3-204ENST00000580997 JPH1Q9HDC5 661 aaPredicted RBP14.26□□□□□ -0.13
SENP3-204ENST00000580997 NFASCO94856 1347 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 RBAK-RBAKDNI3L0D1 243 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 LPXNO60711 386 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 REC8O95072 547 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 RPS6KB1P23443 525 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 EVCP57679 992 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 HTRA4P83105 476 aaPredicted RBP14.25□□□□□ -0.13
SENP3-204ENST00000580997 APOBRQ0VD83 1088 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 MARCH8Q5T0T0 291 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 TAF2Q6P1X5 1199 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 BLOC1S2Q6QNY1 142 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 NIPA1Q7RTP0 329 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 CRYGNQ8WXF5 182 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 ARNTL2Q8WYA1 636 aa14.25□□□□□ -0.13
SENP3-204ENST00000580997 BRF1Q92994 677 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms