RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 OTUD7AQ8TE49 926 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-210ENST00000580713 MSLNLQ96KJ4 702 aa12.5□□□□□ -0.41
TOP3A-210ENST00000580713 UBA5Q9GZZ9 404 aa12.5□□□□□ -0.41
TOP3A-210ENST00000580713 COL20A1Q9P218 1284 aa12.5□□□□□ -0.41
TOP3A-210ENST00000580713 NLRC5Q86WI3 1866 aa12.5□□□□□ -0.41
TOP3A-210ENST00000580713 ABCB11O95342 1321 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 ADGRA3Q8IWK6 1321 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 SALL3Q9BXA9 1300 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 GGPS1O95749 300 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 MMP1P03956 469 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 GOLGA8HP0CJ92 632 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 SMIM10L2AP0DMW4 78 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 SMIM10L2BP0DMW5 78 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 MYCLP12524 364 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-210ENST00000580713 HSDL1Q3SXM5 330 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 ZMYM1Q5SVZ6 1142 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 ASCL5Q7RTU5 278 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 ZBTB33Q86T24 672 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 PHF7Q9BWX1 381 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-210ENST00000580713 CPVLQ9H3G5 476 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 ANAPC4Q9UJX5 808 aa12.49□□□□□ -0.41
TOP3A-210ENST00000580713 USP15Q9Y4E8 981 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-210ENST00000580713 H3BRB1 525 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 CAND2O75155 1236 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 CFBP00751 764 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 MX1P20591 662 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 NRIP1P48552 1158 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 PDE1AP54750 535 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 CBX2Q14781 532 aaPredicted RBP12.48□□□□□ -0.41
TOP3A-210ENST00000580713 CDC37Q16543 378 aaPredicted RBP12.48□□□□□ -0.41
TOP3A-210ENST00000580713 CELF3Q5SZQ8 465 aaKnown RBP12.48□□□□□ -0.41
TOP3A-210ENST00000580713 GPATCH4Q5T3I0 446 aaKnown RBP12.48□□□□□ -0.41
TOP3A-210ENST00000580713 MYSM1Q5VVJ2 828 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 ADGRD2Q7Z7M1 963 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 RBM23Q86U06 439 aaKnown RBP12.48□□□□□ -0.41
TOP3A-210ENST00000580713 EFHBQ8N7U6 833 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 SMRP1Q8NCR6 262 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 CLP1Q92989 425 aaKnown RBP12.48□□□□□ -0.41
TOP3A-210ENST00000580713 C16orf70Q9BSU1 422 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 MAF1Q9H063 256 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 RNPEPQ9H4A4 650 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 TUT1Q9H6E5 874 aaKnown RBP12.48□□□□□ -0.41
TOP3A-210ENST00000580713 MLXIPQ9HAP2 919 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 PXMP2Q9NR77 195 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 TCP11L1Q9NUJ3 509 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 CLEC1BQ9P126 229 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 BARX2Q9UMQ3 279 aaPredicted RBP12.48□□□□□ -0.41
TOP3A-210ENST00000580713 PLAGL2Q9UPG8 496 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 MRPL11Q9Y3B7 192 aaKnown RBP12.48□□□□□ -0.41
TOP3A-210ENST00000580713 RALGAPA2Q2PPJ7 1873 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 RIF1Q5UIP0 2472 aaKnown RBP12.48□□□□□ -0.41
TOP3A-210ENST00000580713 COL4A6Q14031 1691 aa12.48□□□□□ -0.41
TOP3A-210ENST00000580713 MYH7BA7E2Y1 1941 aa12.47□□□□□ -0.41
TOP3A-210ENST00000580713 DHX16O60231 1041 aaKnown RBP12.47□□□□□ -0.41
TOP3A-210ENST00000580713 LINC00271P0C7V0 271 aa12.47□□□□□ -0.41
TOP3A-210ENST00000580713 HSPD1P10809 573 aaKnown RBP12.47□□□□□ -0.41
TOP3A-210ENST00000580713 GNAT1P11488 350 aa12.47□□□□□ -0.41
TOP3A-210ENST00000580713 HOXD8P13378 290 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-210ENST00000580713 COASYQ13057 564 aa12.47□□□□□ -0.41
TOP3A-210ENST00000580713 KCNV1Q6PIU1 500 aa12.47□□□□□ -0.41
TOP3A-210ENST00000580713 ERMP1Q7Z2K6 904 aa12.47□□□□□ -0.41
TOP3A-210ENST00000580713 ASIC4Q96FT7 647 aa12.47□□□□□ -0.41
TOP3A-210ENST00000580713 PLVAPQ9BX97 442 aa12.47□□□□□ -0.41
TOP3A-210ENST00000580713 OSBPL3Q9H4L5 887 aa12.47□□□□□ -0.41
TOP3A-210ENST00000580713 SETD4Q9NVD3 440 aa12.47□□□□□ -0.41
TOP3A-210ENST00000580713 KIAA1217Q5T5P2 1943 aa12.47□□□□□ -0.41
TOP3A-210ENST00000580713 TTC41PQ6P2S7 1318 aa12.46□□□□□ -0.41
TOP3A-210ENST00000580713 PROB1E7EW31 1015 aa12.46□□□□□ -0.41
TOP3A-210ENST00000580713 NOP56O00567 594 aaKnown RBP12.46□□□□□ -0.41
TOP3A-210ENST00000580713 FOXP2O15409 715 aa12.46□□□□□ -0.41
TOP3A-210ENST00000580713 SNHG28P0DPA3 235 aa12.46□□□□□ -0.41
TOP3A-210ENST00000580713 GHRP10912 638 aa12.46□□□□□ -0.41
TOP3A-210ENST00000580713 DNAJB1P25685 340 aa12.46□□□□□ -0.41
TOP3A-210ENST00000580713 ICAM3P32942 547 aa12.46□□□□□ -0.41
TOP3A-210ENST00000580713 ID4P47928 161 aa12.46□□□□□ -0.41
TOP3A-210ENST00000580713 CAMK1Q14012 370 aa12.46□□□□□ -0.41
TOP3A-210ENST00000580713 VPS53Q5VIR6 699 aa12.46□□□□□ -0.41
TOP3A-210ENST00000580713 TTC14Q96N46 770 aa12.46□□□□□ -0.41
TOP3A-210ENST00000580713 VAT1LQ9HCJ6 419 aa12.46□□□□□ -0.41
TOP3A-210ENST00000580713 KMT2EQ8IZD2 1858 aa12.46□□□□□ -0.42
TOP3A-210ENST00000580713 FAM186AA6NE01 2351 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 ATG2AQ2TAZ0 1938 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 CCDC171Q6TFL3 1326 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 PRR23AA6NEV1 266 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 PDGFBP01127 241 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-210ENST00000580713 LGALS2P05162 132 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 ITGB1P05556 798 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 FGRP09769 529 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 UBA1P22314 1058 aaKnown RBP12.45□□□□□ -0.42
TOP3A-210ENST00000580713 ARHGAP4P98171 946 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 PTPN21Q16825 1174 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 QRICH1Q2TAL8 776 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 TTC22Q5TAA0 569 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 ADGRF4Q8IZF3 695 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 SPPL3Q8TCT6 385 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 MICAL1Q8TDZ2 1067 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 POF1BQ8WVV4 589 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 P2RX5Q93086 422 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 RIPOR3Q96MK2 946 aa12.45□□□□□ -0.42
TOP3A-210ENST00000580713 PDCD2LQ9BRP1 358 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms