RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 NFASCO94856 1347 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 NRCAMQ92823 1304 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 RPLP2P05387 115 aaKnown RBP22.94■■□□□ 1.26
SMG8-204ENST00000580498 FOSL2P15408 326 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 ANAPC15P60006 121 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 ARHGAP4P98171 946 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 ANKRD1Q15327 319 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 CNKSR3Q6P9H4 555 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 NIPA1Q7RTP0 329 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 RSPH3Q86UC2 560 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 SERINC5Q86VE9 423 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 PGBD1Q96JS3 809 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 GUCD1Q96NT3 240 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 GAS2L1Q99501 681 aaPredicted RBP22.94■■□□□ 1.26
SMG8-204ENST00000580498 C22orf23Q9BZE7 217 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 UPF3BQ9BZI7 483 aaKnown RBP22.94■■□□□ 1.26
SMG8-204ENST00000580498 SH3GLB2Q9NR46 395 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 PCDHA11Q9Y5I1 949 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 SCN5AQ14524 2016 aa22.94■■□□□ 1.26
SMG8-204ENST00000580498 SETQ01105 290 aaPredicted RBP22.93■■□□□ 1.26
SMG8-204ENST00000580498 RNPEPQ9H4A4 650 aa22.93■■□□□ 1.26
SMG8-204ENST00000580498 GRXCR1A8MXD5 290 aa22.92■■□□□ 1.26
SMG8-204ENST00000580498 RSPH10B2B2RC85 870 aa22.92■■□□□ 1.26
SMG8-204ENST00000580498 ATP9AO75110 1047 aa22.92■■□□□ 1.26
SMG8-204ENST00000580498 RSPH10BP0C881 870 aa22.92■■□□□ 1.26
SMG8-204ENST00000580498 XBP1P17861 261 aa22.92■■□□□ 1.26
SMG8-204ENST00000580498 CLK2P49760 499 aaKnown RBP22.92■■□□□ 1.26
SMG8-204ENST00000580498 NLRP5P59047 1200 aa22.92■■□□□ 1.26
SMG8-204ENST00000580498 IKBKEQ14164 716 aa22.92■■□□□ 1.26
SMG8-204ENST00000580498 TRIM50Q86XT4 487 aa22.92■■□□□ 1.26
SMG8-204ENST00000580498 FAM177A1Q8N128 213 aaPredicted RBP22.92■■□□□ 1.26
SMG8-204ENST00000580498 DHX38Q92620 1227 aaKnown RBP22.92■■□□□ 1.26
SMG8-204ENST00000580498 TTYH1Q9H313 450 aaPredicted RBP22.92■■□□□ 1.26
SMG8-204ENST00000580498 BCAS3Q9H6U6 928 aa22.92■■□□□ 1.26
SMG8-204ENST00000580498 TMEM260Q9NX78 707 aa22.92■■□□□ 1.26
SMG8-204ENST00000580498 ABHD14A-ACY1A0A1B0GW23 586 aa22.91■■□□□ 1.26
SMG8-204ENST00000580498 DEXIO95424 95 aa22.91■■□□□ 1.26
SMG8-204ENST00000580498 ZNF200P98182 395 aaPredicted RBP22.91■■□□□ 1.26
SMG8-204ENST00000580498 PPFIA1Q13136 1202 aa22.91■■□□□ 1.26
SMG8-204ENST00000580498 TOB2Q14106 344 aaPredicted RBP22.91■■□□□ 1.26
SMG8-204ENST00000580498 ZNF618Q5T7W0 954 aa22.91■■□□□ 1.26
SMG8-204ENST00000580498 TAF2Q6P1X5 1199 aa22.91■■□□□ 1.26
SMG8-204ENST00000580498 PLA2G4DQ86XP0 818 aa22.91■■□□□ 1.26
SMG8-204ENST00000580498 NCOA5Q9HCD5 579 aaKnown RBP22.91■■□□□ 1.26
SMG8-204ENST00000580498 SETD4Q9NVD3 440 aa22.91■■□□□ 1.26
SMG8-204ENST00000580498 MEIS1O00470 390 aa22.9■■□□□ 1.26
SMG8-204ENST00000580498 PBX2P40425 430 aa22.9■■□□□ 1.26
SMG8-204ENST00000580498 NTRK3Q16288 839 aa22.9■■□□□ 1.26
SMG8-204ENST00000580498 FAM160B1Q5W0V3 765 aa22.9■■□□□ 1.26
SMG8-204ENST00000580498 PPP2R2DQ66LE6 453 aa22.9■■□□□ 1.26
SMG8-204ENST00000580498 MYLIPQ8WY64 445 aa22.9■■□□□ 1.26
SMG8-204ENST00000580498 CTAGE1Q96RT6 745 aa22.9■■□□□ 1.26
SMG8-204ENST00000580498 ZBED2Q9BTP6 218 aa22.9■■□□□ 1.26
SMG8-204ENST00000580498 SLKQ9H2G2 1235 aaPredicted RBP22.9■■□□□ 1.26
SMG8-204ENST00000580498 AGO4Q9HCK5 861 aaKnown RBP22.9■■□□□ 1.26
SMG8-204ENST00000580498 RRN3P2A6NIE6 340 aa22.89■■□□□ 1.25
SMG8-204ENST00000580498 TREHO43280 583 aa22.89■■□□□ 1.25
SMG8-204ENST00000580498 CXCL10P02778 98 aa22.89■■□□□ 1.25
SMG8-204ENST00000580498 CYP3A4P08684 503 aa22.89■■□□□ 1.25
SMG8-204ENST00000580498 MARK3P27448 753 aa22.89■■□□□ 1.25
SMG8-204ENST00000580498 HOXC8P31273 242 aa22.89■■□□□ 1.25
SMG8-204ENST00000580498 SLC26A2P50443 739 aa22.89■■□□□ 1.25
SMG8-204ENST00000580498 STK3Q13188 491 aa22.89■■□□□ 1.25
SMG8-204ENST00000580498 PKN1Q16512 942 aa22.89■■□□□ 1.25
SMG8-204ENST00000580498 NKX2-4Q9H2Z4 354 aa22.89■■□□□ 1.25
SMG8-204ENST00000580498 TRPC6Q9Y210 931 aa22.89■■□□□ 1.25
SMG8-204ENST00000580498 GSTTP1A0A1W2PQM5 241 aa22.88■■□□□ 1.25
SMG8-204ENST00000580498 BACH1O14867 736 aa22.88■■□□□ 1.25
SMG8-204ENST00000580498 LGR5O75473 907 aa22.88■■□□□ 1.25
SMG8-204ENST00000580498 ACTR2P61160 394 aa22.88■■□□□ 1.25
SMG8-204ENST00000580498 TRIM71Q2Q1W2 868 aaKnown RBP22.88■■□□□ 1.25
SMG8-204ENST00000580498 GALNT17Q6IS24 598 aa22.88■■□□□ 1.25
SMG8-204ENST00000580498 MAFAQ8NHW3 353 aaPredicted RBP22.88■■□□□ 1.25
SMG8-204ENST00000580498 LMBR1Q8WVP7 490 aa22.88■■□□□ 1.25
SMG8-204ENST00000580498 SEPT8Q92599 483 aa22.88■■□□□ 1.25
SMG8-204ENST00000580498 ZNF577Q9BSK1 485 aa22.88■■□□□ 1.25
SMG8-204ENST00000580498 TBC1D22BQ9NU19 505 aa22.88■■□□□ 1.25
SMG8-204ENST00000580498 VPS54Q9P1Q0 977 aa22.88■■□□□ 1.25
SMG8-204ENST00000580498 IPO5O00410 1097 aaKnown RBP22.87■■□□□ 1.25
SMG8-204ENST00000580498 ARP10275 920 aa22.87■■□□□ 1.25
SMG8-204ENST00000580498 STAT5BP51692 787 aa22.87■■□□□ 1.25
SMG8-204ENST00000580498 GRIK4Q16099 956 aa22.87■■□□□ 1.25
SMG8-204ENST00000580498 MIS18BP1Q6P0N0 1132 aa22.87■■□□□ 1.25
SMG8-204ENST00000580498 CYP2W1Q8TAV3 490 aa22.87■■□□□ 1.25
SMG8-204ENST00000580498 TUBE1Q9UJT0 475 aa22.87■■□□□ 1.25
SMG8-204ENST00000580498 M0QZ92 97 aa22.86■■□□□ 1.25
SMG8-204ENST00000580498 TLL1O43897 1013 aa22.86■■□□□ 1.25
SMG8-204ENST00000580498 NBNO60934 754 aa22.86■■□□□ 1.25
SMG8-204ENST00000580498 RABGGTBP53611 331 aa22.86■■□□□ 1.25
SMG8-204ENST00000580498 GRIN2CQ14957 1233 aa22.86■■□□□ 1.25
SMG8-204ENST00000580498 PLPPR4Q7Z2D5 763 aa22.86■■□□□ 1.25
SMG8-204ENST00000580498 HERC6Q8IVU3 1022 aa22.86■■□□□ 1.25
SMG8-204ENST00000580498 WASF1Q92558 559 aa22.86■■□□□ 1.25
SMG8-204ENST00000580498 APBB2Q92870 758 aa22.86■■□□□ 1.25
SMG8-204ENST00000580498 GBF1Q92538 1859 aa22.85■■□□□ 1.25
SMG8-204ENST00000580498 DDX39AO00148 427 aaKnown RBP22.85■■□□□ 1.25
SMG8-204ENST00000580498 PPFIA3O75145 1194 aa22.85■■□□□ 1.25
SMG8-204ENST00000580498 AMHP03971 560 aa22.85■■□□□ 1.25
SMG8-204ENST00000580498 CTSHP09668 335 aa22.85■■□□□ 1.25
SMG8-204ENST00000580498 WDR5P61964 334 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms