RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 WRAP73Q9P2S5 460 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 ZNFX1Q9P2E3 1918 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 TPM3P06753 285 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 LRMPQ12912 555 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 EPHA7Q15375 998 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 COBLL1Q53SF7 1204 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 TTI2Q6NXR4 508 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 VSIG10LQ86VR7 867 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 RIOX2Q8IUF8 465 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 TPH2Q8IWU9 490 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 SYT2Q8N9I0 419 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 NSUN6Q8TEA1 469 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 PIGOQ8TEQ8 1089 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 BHMT2Q9H2M3 363 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 PANK4Q9NVE7 773 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 MCM3APO60318 1980 aa16.52■□□□□ 0.24
CDK5RAP3-218ENST00000580391 ATP9AO75110 1047 aa16.52■□□□□ 0.24
CDK5RAP3-218ENST00000580391 EYA4O95677 639 aa16.52■□□□□ 0.24
CDK5RAP3-218ENST00000580391 GPAT2Q6NUI2 795 aa16.52■□□□□ 0.24
CDK5RAP3-218ENST00000580391 BANK1Q8NDB2 785 aa16.52■□□□□ 0.24
CDK5RAP3-218ENST00000580391 DHTKD1Q96HY7 919 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-218ENST00000580391 TRIM47Q96LD4 638 aa16.52■□□□□ 0.24
CDK5RAP3-218ENST00000580391 LXNQ9BS40 222 aa16.52■□□□□ 0.24
CDK5RAP3-218ENST00000580391 BMP2KQ9NSY1 1161 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-218ENST00000580391 TRPM7Q96QT4 1865 aa16.52■□□□□ 0.23
CDK5RAP3-218ENST00000580391 ASTN1O14525 1302 aa16.52■□□□□ 0.23
CDK5RAP3-218ENST00000580391 KRT18P05783 430 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CCNE1P24864 410 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 MIER3Q7Z3K6 550 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CACTINQ8WUQ7 758 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 P2RX5Q93086 422 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 SLC10A4Q96EP9 437 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 RUSC1Q9BVN2 902 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 FGFBP2Q9BYJ0 223 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 GTPBP4Q9BZE4 634 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 R3HDMLQ9H3Y0 253 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 ARID2Q68CP9 1835 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 A0A1B0GTH6 734 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 FRMD3A2A2Y4 597 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 ZBTB39O15060 712 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 RGS20O76081 388 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CNTN2Q02246 1040 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 SNAPC2Q13487 334 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 FAM26FQ5R3K3 315 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 XRRA1Q6P2D8 792 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 FASTKD5Q7L8L6 764 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 NCAPG2Q86XI2 1143 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 VSTM4Q8IW00 320 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CCDC65Q8IXS2 484 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 ANKRD35Q8N283 1001 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 INPP4AQ96PE3 977 aaPredicted RBP16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 DUSP9Q99956 384 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 REEP2Q9BRK0 252 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 MOV10L1Q9BXT6 1211 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 TXNRD2Q9NNW7 524 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 TBC1D7Q9P0N9 293 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 PYCARDQ9ULZ3 195 aa16.51■□□□□ 0.23
CDK5RAP3-218ENST00000580391 PPP1R2P41236 205 aa16.5■□□□□ 0.23
CDK5RAP3-218ENST00000580391 GIT2Q14161 759 aa16.5■□□□□ 0.23
CDK5RAP3-218ENST00000580391 LRRC41Q15345 812 aa16.5■□□□□ 0.23
CDK5RAP3-218ENST00000580391 IRF2BP1Q8IU81 584 aa16.5■□□□□ 0.23
CDK5RAP3-218ENST00000580391 SEMA6BQ9H3T3 888 aa16.5■□□□□ 0.23
CDK5RAP3-218ENST00000580391 FBXO40Q9UH90 709 aa16.5■□□□□ 0.23
CDK5RAP3-218ENST00000580391 MKRN3Q13064 507 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 PSMD2Q13200 908 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 KRT31Q15323 416 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 ANKRD40Q6AI12 368 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 GUF1Q8N442 669 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 NEK9Q8TD19 979 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 GPRASP2Q96D09 838 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 MAF1Q9H063 256 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 TBC1D22BQ9NU19 505 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 IMPACTQ9P2X3 320 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 ADD3Q9UEY8 706 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 PLXNB2O15031 1838 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 PFASO15067 1338 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 MYH9P35579 1960 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 BICDL2A1A5D9 508 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 RSPH10B2B2RC85 870 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 KCNJ18B7U540 433 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 RSPH10BP0C881 870 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 MUTP22033 750 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 OSBPP22059 807 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 KCNJ12Q14500 433 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 TCP11X2Q5H9J9 407 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 KCTD17Q8N5Z5 321 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 SRRTQ9BXP5 876 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 ZHX3Q9H4I2 956 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 GBA2Q9HCG7 927 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 NMRK2Q9NPI5 230 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 RBPJLQ9UBG7 517 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 LIMA1Q9UHB6 759 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 SAMM50Q9Y512 469 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 PCDHA2Q9Y5H9 948 aa16.49■□□□□ 0.23
CDK5RAP3-218ENST00000580391 PLXNA1Q9UIW2 1896 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 TEX33O43247 280 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CCNE2O96020 404 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 ERCC3P19447 782 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 SPAG1Q07617 926 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 FSTL1Q12841 308 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms