RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CCAR2Q8N163 923 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 NAP1L4Q99733 375 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 POLD4Q9HCU8 107 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 TELO2Q9Y4R8 837 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 KIF20AO95235 890 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CETPP11597 493 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 PCNX4Q63HM2 1172 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 OTOP1Q7RTM1 612 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CATSPER3Q86XQ3 398 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 TRIML1Q8N9V2 468 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CCDC112Q8NEF3 446 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CALML4Q96GE6 196 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CDK5RAP3Q96JB5 506 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 RAB34Q9BZG1 259 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 EHMT1Q9H9B1 1298 aa14.16□□□□□ -0.14
CDK5RAP3-217ENST00000580287 KIF3CO14782 793 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 PSMD10O75832 226 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 RGS20O76081 388 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 SSBP05455 408 aaKnown RBP eCLIP14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 ITGB3BPQ13352 177 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 MTMR1Q13613 665 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 EEPD1Q7L9B9 569 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 HPS3Q969F9 1004 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 FAM20AQ96MK3 541 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 MAPK8IP1Q9UQF2 711 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 NRDCO43847 1150 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 GAS7O60861 476 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 RAD51AP2Q09MP3 1159 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CTTNQ14247 550 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 DYMQ7RTS9 669 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 VSIG10LQ86VR7 867 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 MB21D1Q8N884 522 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 CCDC150Q8NCX0 1101 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 LRRN4CLQ8ND94 238 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 ZIC5Q96T25 663 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 SAMSN1Q9NSI8 373 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 KBTBD4Q9NVX7 518 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 ZNF215Q9UL58 517 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 UBIAD1Q9Y5Z9 338 aa14.15□□□□□ -0.14
CDK5RAP3-217ENST00000580287 SPATA31C1P0DKV0 1188 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ERVK-9P63128 1117 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ERVK-24P63145 666 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 CHST13Q8NET6 341 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SPATA20Q8TB22 786 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 NSUN6Q8TEA1 469 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SLC5A5Q92911 643 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 UNC45AQ9H3U1 944 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 BRCA2P51587 3418 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 TBX3O15119 743 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SP4Q02446 784 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 CACNB1Q02641 598 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PABPC4Q13310 644 aaKnown RBP eCLIP14.14□□□□□ -0.152e-7■■■□□ 15.2
CDK5RAP3-217ENST00000580287 NYAP1Q6ZVC0 841 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 TMX1Q9H3N1 280 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 JADE2Q9NQC1 790 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 RABGAP1Q9Y3P9 1069 aa14.14□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SOWAHBA6NEL2 793 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 DHX15O43143 795 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 CD44P16070 742 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 CREBRFQ8IUR6 639 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ENOX1Q8TC92 643 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PIGOQ8TEQ8 1089 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 EIF2AK1Q9BQI3 630 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 INTS13Q9NVM9 706 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 MAP3K20Q9NYL2 800 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 WRAP73Q9P2S5 460 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PNMA2Q9UL42 364 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 NPHP3-ACAD11A0A0J9YXS1 232 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 MYMKA6NI61 221 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 IGF2BP3O00425 579 aaKnown RBP eCLIP14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SEMA3FQ13275 785 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 RASAL3Q86YV0 1011 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 TPH2Q8IWU9 490 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 DYDC2Q96IM9 177 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 MED15Q96RN5 788 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SH2D3AQ9BRG2 576 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 AGO4Q9HCK5 861 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 GDAQ9Y2T3 454 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SYNRGQ9UMZ2 1314 aa14.13□□□□□ -0.15
CDK5RAP3-217ENST00000580287 POTEB2H3BUK9 544 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 GTPBP6O43824 516 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 RPN1P04843 607 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 TMEM119Q4V9L6 283 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SYT10Q6XYQ8 523 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 LARP4BQ92615 738 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 GSDMAQ96QA5 445 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 TRIM9Q9C026 710 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ABT1Q9ULW3 272 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 FRMPD4Q14CM0 1322 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 ZBTB48P10074 688 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 BANK1Q8NDB2 785 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 RAD54LQ92698 747 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PPP1R13BQ96KQ4 1090 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 PASKQ96RG2 1323 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 CTNND2Q9UQB3 1225 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 LOC285556D6RIA3 1793 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 CEP350Q5VT06 3117 aa14.12□□□□□ -0.15
CDK5RAP3-217ENST00000580287 UNCXA6NJT0 531 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 SLITRK3O94933 977 aa14.11□□□□□ -0.15
CDK5RAP3-217ENST00000580287 CCND2P30279 289 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms