RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-209ENST00000580158 RUBCNQ92622 972 aa7.21□□□□□ -1.26
KPNB1-209ENST00000580158 FGD4Q96M96 766 aa7.21□□□□□ -1.26
KPNB1-209ENST00000580158 C11orf84Q9BUA3 381 aaPredicted RBP7.21□□□□□ -1.26
KPNB1-209ENST00000580158 ZMYND15Q9H091 742 aa7.21□□□□□ -1.26
KPNB1-209ENST00000580158 COPRSQ9NQ92 184 aa7.21□□□□□ -1.26
KPNB1-209ENST00000580158 COG6Q9Y2V7 657 aa7.21□□□□□ -1.26
KPNB1-209ENST00000580158 DMDP11532 3685 aa7.21□□□□□ -1.26
KPNB1-209ENST00000580158 DMXL1Q9Y485 3027 aa7.21□□□□□ -1.26
KPNB1-209ENST00000580158 SLC35F4A4IF30 521 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 ATP2A1O14983 1001 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 LINC01565O15544 149 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 NBNO60934 754 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 UBTFL1P0CB47 393 aaPredicted RBP7.2□□□□□ -1.26
KPNB1-209ENST00000580158 GTF2F1P35269 517 aaKnown RBP eCLIP7.2□□□□□ -1.26
KPNB1-209ENST00000580158 CHMP4BP1P59074 171 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 CNTN2Q02246 1040 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 GABPAQ06546 454 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 MTMR3Q13615 1198 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 ANGPT1Q15389 498 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 DUSP28Q4G0W2 176 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 CCDC158Q5M9N0 1113 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 TTC39AQ5SRH9 613 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 FAM83BQ5T0W9 1011 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 TAPT1Q6NXT6 567 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 ZC3H14Q6PJT7 736 aaKnown RBP7.2□□□□□ -1.26
KPNB1-209ENST00000580158 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.2□□□□□ -1.26
KPNB1-209ENST00000580158 SV2AQ7L0J3 742 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 VWA5B2Q8N398 1253 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 MIGA1Q8NAN2 632 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 CYP2W1Q8TAV3 490 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 LRRN4Q8WUT4 740 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 CCDC17Q96LX7 622 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 VTA1Q9NP79 307 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 PDGFCQ9NRA1 345 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 SNRKQ9NRH2 765 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 SWAP70Q9UH65 585 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 SORCS3Q9UPU3 1222 aa7.2□□□□□ -1.26
KPNB1-209ENST00000580158 USP15Q9Y4E8 981 aaPredicted RBP7.2□□□□□ -1.26
KPNB1-209ENST00000580158 BAZ2AQ9UIF9 1905 aaKnown RBP7.19□□□□□ -1.26
KPNB1-209ENST00000580158 ZNF292O60281 2723 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 CHD6Q8TD26 2715 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 CDC14CA4D256 554 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 E9PSI1 815 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 C5orf67F2Z3F1 127 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 LGR5O75473 907 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 CSPG5O95196 566 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 ADRB1P08588 477 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 CKBP12277 381 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 EEF2P13639 858 aaKnown RBP7.19□□□□□ -1.26
KPNB1-209ENST00000580158 PTGS1P23219 599 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 GSK3AP49840 483 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 RELBQ01201 579 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 GPNMBQ14956 572 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 SUZ12Q15022 739 aaKnown RBP7.19□□□□□ -1.26
KPNB1-209ENST00000580158 NR6A1Q15406 480 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 SIAH1Q8IUQ4 282 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 FBXO16Q8IX29 292 aaPredicted RBP7.19□□□□□ -1.26
KPNB1-209ENST00000580158 FIBCD1Q8N539 461 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 FAM133AQ8N9E0 248 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 KREMEN2Q8NCW0 462 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 OR6J1Q8NGC5 347 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 WDR11Q9BZH6 1224 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 RAVER2Q9HCJ3 691 aaKnown RBP7.19□□□□□ -1.26
KPNB1-209ENST00000580158 POLMQ9NP87 494 aaPredicted RBP7.19□□□□□ -1.26
KPNB1-209ENST00000580158 EMSYQ7Z589 1322 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 CEP250Q9BV73 2442 aa7.19□□□□□ -1.26
KPNB1-209ENST00000580158 SPTBN2O15020 2390 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 NKRFO15226 690 aaKnown RBP eCLIP7.18□□□□□ -1.26
KPNB1-209ENST00000580158 GRM6O15303 877 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 CYP2E1P05181 493 aaPredicted RBP7.18□□□□□ -1.26
KPNB1-209ENST00000580158 BMPR1AP36894 532 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 CTSOP43234 321 aaPredicted RBP7.18□□□□□ -1.26
KPNB1-209ENST00000580158 ATXN1P54253 815 aaKnown RBP7.18□□□□□ -1.26
KPNB1-209ENST00000580158 OAZ1P54368 228 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 RBL2Q08999 1139 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 INTS6LQ5JSJ4 861 aaKnown RBP7.18□□□□□ -1.26
KPNB1-209ENST00000580158 CLEC10AQ8IUN9 316 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 CCDC105Q8IYK2 499 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 SVOPQ8N4V2 548 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 EFHBQ8N7U6 833 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 PNMA1Q8ND90 353 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 FLCNQ8NFG4 579 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 PPP1R13LQ8WUF5 828 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 TOP1MTQ969P6 601 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 INSM2Q96T92 566 aaPredicted RBP7.18□□□□□ -1.26
KPNB1-209ENST00000580158 RTP3Q9BQQ7 232 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 ACAD9Q9H845 621 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 KANSL2Q9H9L4 492 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 HOMER2Q9NSB8 354 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 MCM9Q9NXL9 1143 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 CLEC1BQ9P126 229 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 NR2E1Q9Y466 385 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 GPSM3Q9Y4H4 160 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 PTPRCP08575 1304 aa7.18□□□□□ -1.26
KPNB1-209ENST00000580158 LOC100996750A0A140TA64 210 aa7.17□□□□□ -1.26
KPNB1-209ENST00000580158 FSD2A1L4K1 749 aa7.17□□□□□ -1.26
KPNB1-209ENST00000580158 PRR5-ARHGAP8B1AHC4 643 aa7.17□□□□□ -1.26
KPNB1-209ENST00000580158 IDH1O75874 414 aaKnown RBP7.17□□□□□ -1.26
KPNB1-209ENST00000580158 MMP1P03956 469 aa7.17□□□□□ -1.26
KPNB1-209ENST00000580158 AKR1B1P15121 316 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms