RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 OPLAHO14841 1288 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 CAND2O75155 1236 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 MYCLP12524 364 aaPredicted RBP10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 SP100P23497 879 aaPredicted RBP10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 ICAM3P32942 547 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 PTPN21Q16825 1174 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 QRICH1Q2TAL8 776 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 ERMP1Q7Z2K6 904 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 TRIM50Q86XT4 487 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 VN1R2Q8NFZ6 395 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 ZNF689Q96CS4 500 aaPredicted RBP10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 TUT1Q9H6E5 874 aaKnown RBP10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 TCP11L1Q9NUJ3 509 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 SETD4Q9NVD3 440 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 TRPC6Q9Y210 931 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 TELO2Q9Y4R8 837 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 CFBP00751 764 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 CHRNA1P02708 482 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 MX1P20591 662 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 NBL1P41271 181 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 ID4P47928 161 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 HAND2P61296 217 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 PAN2Q504Q3 1202 aaKnown RBP10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 FAM26DQ5JW98 314 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 ADGRF4Q8IZF3 695 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 TMEM105Q8N8V8 129 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 KLHL23Q8NBE8 558 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 SPPL3Q8TCT6 385 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 LMBR1Q8WVP7 490 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 POF1BQ8WVV4 589 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 LINC01599Q8WXQ3 324 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 PDCD2LQ9BRP1 358 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 ZKSCAN3Q9BRR0 538 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 PLVAPQ9BX97 442 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 IRF2BPLQ9H1B7 796 aa10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 FNDC1Q4ZHG4 1894 aaPredicted RBP10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 TPRP12270 2363 aaKnown RBP10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 BAZ2BQ9UIF8 2168 aaKnown RBP10.82□□□□□ -0.68
SMARCD2-208ENST00000580054 EPG5Q9HCE0 2579 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 PER2O15055 1255 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 DGKIO75912 1065 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 HSPD1P10809 573 aaKnown RBP10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 GATMP50440 423 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 IRX6P78412 446 aaPredicted RBP10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 ARHGAP4P98171 946 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 MGAT3Q09327 533 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 LPIN1Q14693 890 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 GPATCH4Q5T3I0 446 aaKnown RBP10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 RUFY4Q6ZNE9 571 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 FRMD5Q7Z6J6 570 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 MCF2L2Q86YR7 1114 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 TBC1D10CQ8IV04 446 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 SUSD6Q92537 303 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 P2RX5Q93086 422 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 PPP2R3CQ969Q6 453 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 RIPOR3Q96MK2 946 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 SMOC2Q9H3U7 446 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 EHMT1Q9H9B1 1298 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 PCDHB15Q9Y5E8 787 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 DNAH14Q0VDD8 3507 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 WDR87Q6ZQQ6 2873 aa10.81□□□□□ -0.68
SMARCD2-208ENST00000580054 ZNF292O60281 2723 aa10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 ENPP3O14638 875 aa10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 HOXA13P31271 388 aaPredicted RBP10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 HSD17B4P51659 736 aa10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 ADAM17P78536 824 aa10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 PGM5Q15124 567 aa10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 APOL5Q9BWW9 433 aa10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 MLXIPQ9HAP2 919 aa10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 CDH22Q9UJ99 828 aa10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 MRPL11Q9Y3B7 192 aaKnown RBP10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 CEP250Q9BV73 2442 aa10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 NEDD4P46934 1319 aa10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 SALL3Q9BXA9 1300 aa10.8□□□□□ -0.68
SMARCD2-208ENST00000580054 MED19A0JLT2 244 aaPredicted RBP10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 DHX16O60231 1041 aaKnown RBP10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 PPP1R11O60927 126 aaPredicted RBP10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 PPFIA3O75145 1194 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 FGAP02671 866 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 ATF7P17544 494 aaPredicted RBP10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 ALX1Q15699 326 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 UTP14CQ5TAP6 766 aaKnown RBP10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 ZBTB33Q86T24 672 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 CMTR2Q8IYT2 770 aaKnown RBP10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 ADSSL1Q8N142 457 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 ATP8B4Q8TF62 1192 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 TTC14Q96N46 770 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 MAF1Q9H063 256 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 TLE6Q9H808 572 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 JMJD4Q9H9V9 463 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 VAT1LQ9HCJ6 419 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 HELLSQ9NRZ9 838 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 GTF3C3Q9Y5Q9 886 aa10.79□□□□□ -0.68
SMARCD2-208ENST00000580054 A0A0D9SFI3 127 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 NOP56O00567 594 aaKnown RBP10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 BRD1O95696 1058 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 ARP10275 920 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 NUBP1P53384 320 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 SP4Q02446 784 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms