RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 ZHX1Q9UKY1 873 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-215ENST00000579780 NKRFO15226 690 aaKnown RBP eCLIP18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 POLR2DO15514 142 aaKnown RBP18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 ZNF202O95125 648 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 CCNE2O96020 404 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 RPA1P27694 616 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 CCT6AP40227 531 aaKnown RBP18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 SP2Q02086 613 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 GRB10Q13322 594 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 MFSD14CQ5VZR4 134 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 KCTD17Q8N5Z5 321 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 IQUBQ8NA54 791 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 TRIB2Q92519 343 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 CDK5RAP3Q96JB5 506 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 EIF2AK1Q9BQI3 630 aaKnown RBP18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 CUEDC2Q9H467 287 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 MAGEF1Q9HAY2 307 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 PDGFCQ9NRA1 345 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 STK17AQ9UEE5 414 aa18.77■□□□□ 0.6
CDK5RAP3-215ENST00000579780 ACTN4O43707 911 aaKnown RBP18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 GGPS1O95749 300 aa18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 ZNF865P0CJ78 1059 aaPredicted RBP18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 TXNP10599 105 aaKnown RBP18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 PLCG1P19174 1290 aa18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 STAT6P42226 847 aa18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CELF3Q5SZQ8 465 aaKnown RBP18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CCDC183Q5T5S1 534 aa18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CYFIP1Q7L576 1253 aa18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 PDILTQ8N807 584 aa18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 EMID1Q96A84 441 aaPredicted RBP18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 DHX58Q96C10 678 aa18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 PNMA5Q96PV4 448 aa18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 NUP62CLQ9H1M0 184 aa18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CLSTN2Q9H4D0 955 aa18.76■□□□□ 0.59
CDK5RAP3-215ENST00000579780 POTEB3A0JP26 581 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 MED24O75448 989 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CYP2C19P33261 490 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 ADCYAP1R1P41586 468 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 ACTR2P61160 394 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 LY6KQ17RY6 165 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 DUSP28Q4G0W2 176 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 RRAGBQ5VZM2 374 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 IQSEC1Q6DN90 963 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CAVIN1Q6NZI2 390 aaKnown RBP18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 POTEBQ6S5H4 581 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 KRBA2Q6ZNG9 492 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 ELOA2Q8IYF1 753 aaPredicted RBP18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CCDC34Q96HJ3 373 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 HSD17B14Q9BPX1 270 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 TMEM63CQ9P1W3 806 aa18.75■□□□□ 0.59
CDK5RAP3-215ENST00000579780 IGSF9BQ9UPX0 1349 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 GH1P01241 217 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 P4HBP07237 508 aaKnown RBP18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 SLFN14P0C7P3 912 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 SPATA31C1P0DKV0 1188 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CYBAP13498 195 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 ARHGAP1Q07960 439 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CCDC144BQ3MJ40 725 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 NAALADL2Q58DX5 795 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 MIS18BP1Q6P0N0 1132 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 PDXDC2PQ6P474 469 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CEP57L1Q8IYX8 460 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CNNM3Q8NE01 707 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 PXYLP1Q8TE99 480 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 LXNQ9BS40 222 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 MLXIPQ9HAP2 919 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 TSKSQ9UJT2 592 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 SAMM50Q9Y512 469 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 PCDHA10Q9Y5I2 948 aa18.74■□□□□ 0.59
CDK5RAP3-215ENST00000579780 ARID2Q68CP9 1835 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CTAGE5O15320 804 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 ATG7O95352 703 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 HMGCRP04035 888 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 PSAPP07602 524 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 SUPT20HL2P0C7V6 817 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 LAMC2Q13753 1193 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 ZRSR1Q15695 479 aaKnown RBP18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 KANK3Q6NY19 840 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CATSPER3Q86XQ3 398 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 DHX37Q8IY37 1157 aaKnown RBP18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 SLAIN1Q8ND83 568 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 RAET1EQ8TD07 263 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 DYDC2Q96IM9 177 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 SERTAD1Q9UHV2 236 aa18.73■□□□□ 0.59
CDK5RAP3-215ENST00000579780 MYH9P35579 1960 aaKnown RBP18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 POTEFA5A3E0 1075 aa18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 DKC1O60832 514 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 LYPLA2O95372 231 aa18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 AKR1A1P14550 325 aa18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 SMPD1P17405 629 aa18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 CYP4A11Q02928 519 aa18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 ECM1Q16610 540 aa18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 LONRF3Q496Y0 759 aa18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 POTEGQ6S5H5 508 aa18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 ABHD15Q6UXT9 468 aa18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 RBM43Q6ZSC3 357 aaKnown RBP18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 LRRC15Q8TF66 581 aa18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 LARP4BQ92615 738 aaKnown RBP18.72■□□□□ 0.59
CDK5RAP3-215ENST00000579780 RAD54LQ92698 747 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms