RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 ATP8B1O43520 1251 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 SEPT10Q9P0V9 454 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 NRBP1Q9UHY1 535 aa16.49■□□□□ 0.23
ITGB4-206ENST00000579662 GOLGA8CPA6NN73 597 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 CDC25AP30304 524 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 PRELPP51888 382 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 FAM133AQ8N9E0 248 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 UBE2TQ9NPD8 197 aaPredicted RBP16.48■□□□□ 0.23
ITGB4-206ENST00000579662 TBC1D22BQ9NU19 505 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 ZSCAN20P17040 1043 aaPredicted RBP16.48■□□□□ 0.23
ITGB4-206ENST00000579662 SEMA3FQ13275 785 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 CCHCR1Q8TD31 782 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 GDAP1L1Q96MZ0 367 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 SPZ1Q9BXG8 430 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 NHEJ1Q9H9Q4 299 aaPredicted RBP16.48■□□□□ 0.23
ITGB4-206ENST00000579662 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
ITGB4-206ENST00000579662 ZBTB24O43167 697 aaPredicted RBP16.48■□□□□ 0.23
ITGB4-206ENST00000579662 CTTNQ14247 550 aaKnown RBP16.48■□□□□ 0.23
ITGB4-206ENST00000579662 TSGA10IPQ3SY00 556 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 PROM2Q8N271 834 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 SLC10A4Q96EP9 437 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 EEF2KMTQ96G04 330 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 JCADQ9P266 1359 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 TFAMQ00059 246 aaKnown RBP16.48■□□□□ 0.23
ITGB4-206ENST00000579662 GUCY2DQ02846 1103 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 KAZNQ674X7 775 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 ARHGEF2Q92974 986 aaKnown RBP16.48■□□□□ 0.23
ITGB4-206ENST00000579662 INO80Q9ULG1 1556 aaPredicted RBP16.48■□□□□ 0.23
ITGB4-206ENST00000579662 ZC3H13Q5T200 1668 aaKnown RBP16.48■□□□□ 0.23
ITGB4-206ENST00000579662 SRGAP2BP0DMP2 458 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 VPS41P49754 854 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 FAM83BQ5T0W9 1011 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 APOBEC3FQ8IUX4 373 aaKnown RBP16.48■□□□□ 0.23
ITGB4-206ENST00000579662 BBS5Q8N3I7 341 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 MB21D1Q8N884 522 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 AFG3L2Q9Y4W6 797 aa16.48■□□□□ 0.23
ITGB4-206ENST00000579662 PTPRMP28827 1452 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 GPSM2P81274 684 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 PTPROQ16827 1216 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 MAGOHBQ96A72 148 aaKnown RBP16.47■□□□□ 0.23
ITGB4-206ENST00000579662 BHMT2Q9H2M3 363 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 KLHL14Q9P2G3 628 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 GFPT2O94808 682 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 ABL1P00519 1130 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 DNAJC24Q6P3W2 148 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 SARM1Q6SZW1 724 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 GJD4Q96KN9 370 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-206ENST00000579662 BPIFA3Q9BQP9 254 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 FRMPD1Q5SYB0 1578 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 FDX1P10109 184 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 DDIT3P35638 169 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 GNGT1P63211 74 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 ITKQ08881 620 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 MCPH1Q8NEM0 835 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 MGARPQ8TDB4 240 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 VCXQ9H320 206 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 PVALEFA0A1B0GWK0 134 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 NBPF26B4DH59 902 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 EPHB4P54760 987 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 NBPF10Q6P3W6 841 aaKnown RBP16.47■□□□□ 0.23
ITGB4-206ENST00000579662 SGMS1Q86VZ5 419 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 NBPF15Q8N660 670 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 RILPQ96NA2 401 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 VCX3BQ9H321 246 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 REREQ9P2R6 1566 aa16.47■□□□□ 0.23
ITGB4-206ENST00000579662 LRRN2O75325 713 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 EIF4A3P38919 411 aaKnown RBP16.46■□□□□ 0.23
ITGB4-206ENST00000579662 MTMR1Q13613 665 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 CUL4BQ13620 913 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 STXBP2Q15833 593 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 ADAT2Q7Z6V5 191 aaKnown RBP16.46■□□□□ 0.23
ITGB4-206ENST00000579662 RPF1Q9H9Y2 349 aaKnown RBP16.46■□□□□ 0.23
ITGB4-206ENST00000579662 ATP6V0A4Q9HBG4 840 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 KIAA1586Q9HCI6 787 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 FAM170AA1A519 330 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 KRT76Q01546 638 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 SYNE4Q8N205 404 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 RAD54LQ92698 747 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 CALR3Q96L12 384 aaKnown RBP16.46■□□□□ 0.23
ITGB4-206ENST00000579662 GSG1L2A8MUP6 293 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 IFRD2Q12894 506 aaPredicted RBP16.46■□□□□ 0.23
ITGB4-206ENST00000579662 KRT31Q15323 416 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 LMNTD2Q8IXW0 634 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 MSTO1Q9BUK6 570 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.46■□□□□ 0.23
ITGB4-206ENST00000579662 TACC3Q9Y6A5 838 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 CEP95Q96GE4 821 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 TDRD3Q9H7E2 651 aaKnown RBP16.46■□□□□ 0.23
ITGB4-206ENST00000579662 BARHL2Q9NY43 387 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 LRFN2Q9ULH4 789 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 DAAM1Q9Y4D1 1078 aa16.46■□□□□ 0.23
ITGB4-206ENST00000579662 MYO3AQ8NEV4 1616 aa16.46■□□□□ 0.22
ITGB4-206ENST00000579662 NDUFA10O95299 355 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 TSNAXIP1Q2TAA8 658 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 PCDHA13Q9Y5I0 950 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 WDR64B1ANS9 1081 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 ECEL1O95672 775 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 FAM84BQ96KN1 310 aaPredicted RBP16.45■□□□□ 0.22
ITGB4-206ENST00000579662 LCMT1Q9UIC8 334 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 K7ERI5 159 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms