RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 CHRNA1P02708 482 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 TSPY3P0CV98 308 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 TSPY8P0CW00 308 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 ACAP1Q15027 740 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 SYDE2Q5VT97 1194 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 DNERQ8NFT8 737 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 PPTC7Q8NI37 304 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 HAUS7Q99871 368 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 C16orf70Q9BSU1 422 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 RNPEPQ9H4A4 650 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 LIMD1Q9UGP4 676 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 TELO2Q9Y4R8 837 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 NBEAQ8NFP9 2946 aa13.08□□□□□ -0.32
GGA3-206ENST00000578773 HOXD8P13378 290 aaPredicted RBP13.07□□□□□ -0.32
GGA3-206ENST00000578773 COL9A3Q14050 684 aaPredicted RBP13.07□□□□□ -0.32
GGA3-206ENST00000578773 LPIN1Q14693 890 aa13.07□□□□□ -0.32
GGA3-206ENST00000578773 UBE3CQ15386 1083 aa13.07□□□□□ -0.32
GGA3-206ENST00000578773 RTN4RL1Q86UN2 441 aaPredicted RBP13.07□□□□□ -0.32
GGA3-206ENST00000578773 SUMF1Q8NBK3 374 aa13.07□□□□□ -0.32
GGA3-206ENST00000578773 RUBCNQ92622 972 aa13.07□□□□□ -0.32
GGA3-206ENST00000578773 FRAT1Q92837 279 aaPredicted RBP13.07□□□□□ -0.32
GGA3-206ENST00000578773 APBB2Q92870 758 aa13.07□□□□□ -0.32
GGA3-206ENST00000578773 GPKOWQ92917 476 aaPredicted RBP eCLIP13.07□□□□□ -0.32
GGA3-206ENST00000578773 EMID1Q96A84 441 aaPredicted RBP13.07□□□□□ -0.32
GGA3-206ENST00000578773 CHAMP1Q96JM3 812 aa13.07□□□□□ -0.32
GGA3-206ENST00000578773 GCN1Q92616 2671 aaKnown RBP13.07□□□□□ -0.32
GGA3-206ENST00000578773 ADRB1P08588 477 aa13.06□□□□□ -0.32
GGA3-206ENST00000578773 USH1GQ495M9 461 aa13.06□□□□□ -0.32
GGA3-206ENST00000578773 PLPP4Q5VZY2 271 aa13.06□□□□□ -0.32
GGA3-206ENST00000578773 RUFY4Q6ZNE9 571 aa13.06□□□□□ -0.32
GGA3-206ENST00000578773 RHPN1Q8TCX5 695 aa13.06□□□□□ -0.32
GGA3-206ENST00000578773 MICAL1Q8TDZ2 1067 aa13.06□□□□□ -0.32
GGA3-206ENST00000578773 OSBP2Q969R2 916 aa13.06□□□□□ -0.32
GGA3-206ENST00000578773 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
GGA3-206ENST00000578773 CPVLQ9H3G5 476 aa13.06□□□□□ -0.32
GGA3-206ENST00000578773 SETD4Q9NVD3 440 aa13.06□□□□□ -0.32
GGA3-206ENST00000578773 STX8Q9UNK0 236 aa13.06□□□□□ -0.32
GGA3-206ENST00000578773 HIDE1A8MVS5 230 aa13.05□□□□□ -0.32
GGA3-206ENST00000578773 M0R2C6 588 aa13.05□□□□□ -0.32
GGA3-206ENST00000578773 FSCN2O14926 492 aa13.05□□□□□ -0.32
GGA3-206ENST00000578773 IBSPP21815 317 aaPredicted RBP13.05□□□□□ -0.32
GGA3-206ENST00000578773 SP2Q02086 613 aa13.05□□□□□ -0.32
GGA3-206ENST00000578773 MGAT3Q09327 533 aa13.05□□□□□ -0.32
GGA3-206ENST00000578773 FAM26DQ5JW98 314 aa13.05□□□□□ -0.32
GGA3-206ENST00000578773 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
GGA3-206ENST00000578773 BTNL9Q6UXG8 535 aa13.05□□□□□ -0.32
GGA3-206ENST00000578773 CMTR2Q8IYT2 770 aaKnown RBP13.05□□□□□ -0.32
GGA3-206ENST00000578773 SIX5Q8N196 739 aa13.05□□□□□ -0.32
GGA3-206ENST00000578773 EHMT1Q9H9B1 1298 aa13.05□□□□□ -0.32
GGA3-206ENST00000578773 NR2E1Q9Y466 385 aa13.05□□□□□ -0.32
GGA3-206ENST00000578773 POTEMA6NI47 508 aa13.04□□□□□ -0.32
GGA3-206ENST00000578773 NARSO43776 548 aaKnown RBP13.04□□□□□ -0.32
GGA3-206ENST00000578773 SP9P0CG40 484 aa13.04□□□□□ -0.32
GGA3-206ENST00000578773 EIF2AK2P19525 551 aaKnown RBP13.04□□□□□ -0.32
GGA3-206ENST00000578773 TDO2P48775 406 aa13.04□□□□□ -0.32
GGA3-206ENST00000578773 NAALADL2Q58DX5 795 aa13.04□□□□□ -0.32
GGA3-206ENST00000578773 MYSM1Q5VVJ2 828 aa13.04□□□□□ -0.32
GGA3-206ENST00000578773 POTEGQ6S5H5 508 aa13.04□□□□□ -0.32
GGA3-206ENST00000578773 TMEM184AQ6ZMB5 413 aa13.04□□□□□ -0.32
GGA3-206ENST00000578773 TRIM50Q86XT4 487 aa13.04□□□□□ -0.32
GGA3-206ENST00000578773 C12orf76Q8N812 135 aaPredicted RBP13.04□□□□□ -0.32
GGA3-206ENST00000578773 SYTL5Q8TDW5 730 aaPredicted RBP13.04□□□□□ -0.32
GGA3-206ENST00000578773 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.323e-10■■■■□ 23.1
GGA3-206ENST00000578773 SEMA4AQ9H3S1 761 aa13.04□□□□□ -0.32
GGA3-206ENST00000578773 AGO3Q9H9G7 860 aaKnown RBP13.04□□□□□ -0.32
GGA3-206ENST00000578773 MRVI1Q9Y6F6 885 aa13.04□□□□□ -0.32
GGA3-206ENST00000578773 RALGAPA1Q6GYQ0 2036 aa13.04□□□□□ -0.32
GGA3-206ENST00000578773 DOCK8Q8NF50 2099 aa13.04□□□□□ -0.32
GGA3-206ENST00000578773 CEP295Q9C0D2 2601 aa13.03□□□□□ -0.32
GGA3-206ENST00000578773 KRBA1A5PL33 1030 aa13.03□□□□□ -0.32
GGA3-206ENST00000578773 LAMC2Q13753 1193 aa13.03□□□□□ -0.32
GGA3-206ENST00000578773 KIAA0319Q5VV43 1072 aa13.03□□□□□ -0.32
GGA3-206ENST00000578773 ZBTB10Q96DT7 871 aa13.03□□□□□ -0.32
GGA3-206ENST00000578773 SPATA33Q96N06 139 aa13.03□□□□□ -0.32
GGA3-206ENST00000578773 MPHOSPH6Q99547 160 aaKnown RBP13.03□□□□□ -0.32
GGA3-206ENST00000578773 AAASQ9NRG9 546 aa13.03□□□□□ -0.32
GGA3-206ENST00000578773 WDFY3Q8IZQ1 3526 aa13.02□□□□□ -0.32
GGA3-206ENST00000578773 LAMA4Q16363 1823 aa13.02□□□□□ -0.32
GGA3-206ENST00000578773 GGPS1O95749 300 aa13.02□□□□□ -0.33
GGA3-206ENST00000578773 LGALS2P05162 132 aa13.02□□□□□ -0.33
GGA3-206ENST00000578773 ADAM17P78536 824 aa13.02□□□□□ -0.33
GGA3-206ENST00000578773 SPECC1Q5M775 1068 aa13.02□□□□□ -0.33
GGA3-206ENST00000578773 CELF3Q5SZQ8 465 aaKnown RBP13.02□□□□□ -0.33
GGA3-206ENST00000578773 GIMAP6Q6P9H5 292 aa13.02□□□□□ -0.33
GGA3-206ENST00000578773 TDRD5Q8NAT2 981 aaKnown RBP13.02□□□□□ -0.33
GGA3-206ENST00000578773 IL31RAQ8NI17 732 aa13.02□□□□□ -0.33
GGA3-206ENST00000578773 DCAF4Q8WV16 495 aa13.02□□□□□ -0.33
GGA3-206ENST00000578773 SH2B1Q9NRF2 756 aaPredicted RBP13.02□□□□□ -0.33
GGA3-206ENST00000578773 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
GGA3-206ENST00000578773 H3BRB1 525 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 GPAA1O43292 621 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 CAND2O75155 1236 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 FGF18O76093 207 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 DCNP07585 359 aaKnown RBP13.01□□□□□ -0.33
GGA3-206ENST00000578773 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
GGA3-206ENST00000578773 CT47B1P0C2W7 299 aaPredicted RBP13.01□□□□□ -0.33
GGA3-206ENST00000578773 RLBP1P12271 317 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 ATP5JP18859 108 aa13.01□□□□□ -0.33
GGA3-206ENST00000578773 UBA1P22314 1058 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms