RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 IFIH1Q9BYX4 1025 aaKnown RBP8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 NACAP1Q9BZK3 213 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 INCENPQ9NQS7 918 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ZBTB40Q9NUA8 1239 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CLEC1BQ9P126 229 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 STX8Q9UNK0 236 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 KIAA1671Q9BY89 1806 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ANKRD17O75179 2603 aaKnown RBP8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 RALGAPA1Q6GYQ0 2036 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 FSD2A1L4K1 749 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 GRM6O15303 877 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ATF7P17544 494 aaPredicted RBP8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 NDUFV1P49821 464 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SHC2P98077 582 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 LAMC2Q13753 1193 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 KIAA0753Q2KHM9 967 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PRR23BQ6ZRT6 265 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 IFNL3Q8IZI9 196 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 EFHBQ8N7U6 833 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 P2RX5Q93086 422 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 IL17RAQ96F46 866 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 HNRNPABQ99729 332 aaKnown RBP8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 RC3H2Q9HBD1 1191 aaKnown RBP8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 USP15Q9Y4E8 981 aaPredicted RBP8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ADGRA3Q8IWK6 1321 aa8.43□□□□□ -1.06
CDK5RAP3-209ENST00000578663 TSPY2A6NKD2 308 aa8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 C1QTNF9BB2RNN3 333 aa8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PATL2C9JE40 543 aaKnown RBP8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 C1QTNF9P0C862 333 aa8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 THPOP40225 353 aa8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ZNF200P98182 395 aaPredicted RBP8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PPARAQ07869 468 aa8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 NAALADL2Q58DX5 795 aa8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 RASGRP2Q7LDG7 609 aa8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 DHX37Q8IY37 1157 aaKnown RBP8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 DTWD2Q8NBA8 298 aa8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 KREMEN2Q8NCW0 462 aa8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 IWS1Q96ST2 819 aa8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ALG1Q9BT22 464 aa8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PCDHB15Q9Y5E8 787 aa8.42□□□□□ -1.06
CDK5RAP3-209ENST00000578663 TTC3P53804 2025 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PRR5-ARHGAP8B1AHC4 643 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 RNF113AO15541 343 aaKnown RBP8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PPFIA4O75335 1185 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 UPP2O95045 317 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 APPP05067 770 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ZNF286BP0CG31 522 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 NPR3P17342 541 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 AOC1P19801 751 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 TGM1P22735 817 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ARHGAP8P85298 464 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 STXBP2Q15833 593 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 LY6KQ17RY6 165 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 TTBK2Q6IQ55 1244 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SIRT2Q8IXJ6 389 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 KDF1Q8NAX2 398 aaPredicted RBP8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 NSUN6Q8TEA1 469 aaKnown RBP8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SUSD6Q92537 303 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 NAPBQ9H115 298 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CHMP4BQ9H444 224 aaKnown RBP8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 IGFLR1Q9H665 355 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 IL17RBQ9NRM6 502 aa8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 DDX41Q9UJV9 622 aaKnown RBP8.41□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PIEZO2Q9H5I5 2752 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PTPN13Q12923 2485 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 C17orf102A2RUQ5 167 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SRRM3A6NNA2 597 aaPredicted RBP8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ORC4O43929 436 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 EIF3JO75822 258 aaKnown RBP8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 TOP1P11387 765 aaKnown RBP8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SLC16A2P36021 539 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 LMNB2Q03252 620 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CAMK1Q14012 370 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 HIC1Q14526 733 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 FAM26DQ5JW98 314 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 KCNV1Q6PIU1 500 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SEPT14Q6ZU15 432 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CHST3Q7LGC8 479 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ECHDC1Q9NTX5 307 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PLAGL2Q9UPG8 496 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 MRVI1Q9Y6F6 885 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 TICRRQ7Z2Z1 1910 aa8.4□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PATJQ8NI35 1801 aa8.4□□□□□ -1.07
CDK5RAP3-209ENST00000578663 TEX15Q9BXT5 2789 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 PLXNA4Q9HCM2 1894 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ABCB11O95342 1321 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 M0R2C6 588 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 NMT2O60551 498 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 GLP2RO95838 553 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 NEFLP07196 543 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 FGRP09769 529 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 SNHG28P0DPA3 235 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 PDHBP11177 359 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 GNAT1P11488 350 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ZNF543Q08ER8 600 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 MTMR3Q13615 1198 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 ZBTB33Q86T24 672 aa8.39□□□□□ -1.07
CDK5RAP3-209ENST00000578663 UBALD2Q8IYN6 164 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms