RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 PKD2L1Q9P0L9 805 aa26.22■■□□□ 1.79
VAPA-205ENST00000578314 ZBBXA8MT70 800 aa26.21■■□□□ 1.79
VAPA-205ENST00000578314 ADAMTS3O15072 1205 aa26.21■■□□□ 1.79
VAPA-205ENST00000578314 CXCL10P02778 98 aa26.21■■□□□ 1.79
VAPA-205ENST00000578314 CYP3A4P08684 503 aa26.21■■□□□ 1.79
VAPA-205ENST00000578314 ARP10275 920 aa26.21■■□□□ 1.79
VAPA-205ENST00000578314 GNA11P29992 359 aa26.21■■□□□ 1.79
VAPA-205ENST00000578314 ANAPC15P60006 121 aa26.21■■□□□ 1.79
VAPA-205ENST00000578314 ARHGAP4P98171 946 aa26.21■■□□□ 1.79
VAPA-205ENST00000578314 NIPA1Q7RTP0 329 aa26.21■■□□□ 1.79
VAPA-205ENST00000578314 ZNF576Q9H609 170 aa26.21■■□□□ 1.79
VAPA-205ENST00000578314 NFASCO94856 1347 aa26.2■■□□□ 1.79
VAPA-205ENST00000578314 GNAT1P11488 350 aa26.2■■□□□ 1.78
VAPA-205ENST00000578314 FOSL2P15408 326 aa26.2■■□□□ 1.78
VAPA-205ENST00000578314 ADAM17P78536 824 aa26.2■■□□□ 1.78
VAPA-205ENST00000578314 ZNF618Q5T7W0 954 aa26.2■■□□□ 1.78
VAPA-205ENST00000578314 MAFAQ8NHW3 353 aaPredicted RBP26.2■■□□□ 1.78
VAPA-205ENST00000578314 AGO4Q9HCK5 861 aaKnown RBP26.2■■□□□ 1.78
VAPA-205ENST00000578314 JPH1Q9HDC5 661 aaPredicted RBP26.2■■□□□ 1.78
VAPA-205ENST00000578314 SETD4Q9NVD3 440 aa26.2■■□□□ 1.78
VAPA-205ENST00000578314 MSRAQ9UJ68 235 aa26.2■■□□□ 1.78
VAPA-205ENST00000578314 TREHO43280 583 aa26.19■■□□□ 1.78
VAPA-205ENST00000578314 NBNO60934 754 aa26.19■■□□□ 1.78
VAPA-205ENST00000578314 PPFIA3O75145 1194 aa26.19■■□□□ 1.78
VAPA-205ENST00000578314 BAIAP3O94812 1187 aa26.19■■□□□ 1.78
VAPA-205ENST00000578314 ATP2A2P16615 1042 aaKnown RBP26.19■■□□□ 1.78
VAPA-205ENST00000578314 GRIN2CQ14957 1233 aa26.19■■□□□ 1.78
VAPA-205ENST00000578314 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.19■■□□□ 1.784e-6■□□□□ 8.1
VAPA-205ENST00000578314 REXO1Q8N1G1 1221 aaKnown RBP26.19■■□□□ 1.78
VAPA-205ENST00000578314 CCDC148Q8NFR7 591 aa26.19■■□□□ 1.78
VAPA-205ENST00000578314 PHOSPHO2Q8TCD6 241 aa26.19■■□□□ 1.78
VAPA-205ENST00000578314 LARP6Q9BRS8 491 aaKnown RBP26.19■■□□□ 1.78
VAPA-205ENST00000578314 SH3GLB2Q9NR46 395 aa26.19■■□□□ 1.78
VAPA-205ENST00000578314 SLC9A2Q9UBY0 812 aa26.19■■□□□ 1.78
VAPA-205ENST00000578314 CHD9Q3L8U1 2897 aa26.18■■□□□ 1.78
VAPA-205ENST00000578314 ZNF76P36508 570 aa26.18■■□□□ 1.78
VAPA-205ENST00000578314 ITGB3BPQ13352 177 aaPredicted RBP26.18■■□□□ 1.78
VAPA-205ENST00000578314 TRIM22Q8IYM9 498 aa26.18■■□□□ 1.78
VAPA-205ENST00000578314 BICD2Q8TD16 824 aa26.18■■□□□ 1.78
VAPA-205ENST00000578314 IL17RAQ96F46 866 aa26.18■■□□□ 1.78
VAPA-205ENST00000578314 SDF4Q9BRK5 362 aa26.18■■□□□ 1.78
VAPA-205ENST00000578314 SMARCAD1Q9H4L7 1026 aa26.18■■□□□ 1.78
VAPA-205ENST00000578314 ERAP1Q9NZ08 941 aa26.18■■□□□ 1.78
VAPA-205ENST00000578314 NRCAMQ92823 1304 aa26.17■■□□□ 1.78
VAPA-205ENST00000578314 FAM86B1E9PN63 330 aa26.17■■□□□ 1.78
VAPA-205ENST00000578314 EIF5BO60841 1220 aaKnown RBP26.17■■□□□ 1.78
VAPA-205ENST00000578314 CAND2O75155 1236 aa26.17■■□□□ 1.78
VAPA-205ENST00000578314 LGR5O75473 907 aa26.17■■□□□ 1.78
VAPA-205ENST00000578314 FAM86B2P0C5J1 330 aa26.17■■□□□ 1.78
VAPA-205ENST00000578314 THPOP40225 353 aa26.17■■□□□ 1.78
VAPA-205ENST00000578314 SSRP1Q08945 709 aaKnown RBP26.17■■□□□ 1.78
VAPA-205ENST00000578314 MBTPS1Q14703 1052 aa26.17■■□□□ 1.78
VAPA-205ENST00000578314 CNKSR3Q6P9H4 555 aa26.17■■□□□ 1.78
VAPA-205ENST00000578314 VPS54Q9P1Q0 977 aa26.17■■□□□ 1.78
VAPA-205ENST00000578314 PCDHA11Q9Y5I1 949 aa26.17■■□□□ 1.78
VAPA-205ENST00000578314 IGLV3-22A0A075B6J6 115 aa26.16■■□□□ 1.78
VAPA-205ENST00000578314 RSPH10B2B2RC85 870 aa26.16■■□□□ 1.78
VAPA-205ENST00000578314 CPLX1O14810 134 aa26.16■■□□□ 1.78
VAPA-205ENST00000578314 RSPH10BP0C881 870 aa26.16■■□□□ 1.78
VAPA-205ENST00000578314 LMBR1Q8WVP7 490 aa26.16■■□□□ 1.78
VAPA-205ENST00000578314 GLG1Q92896 1179 aa26.16■■□□□ 1.78
VAPA-205ENST00000578314 SLC9A7Q96T83 725 aa26.16■■□□□ 1.78
VAPA-205ENST00000578314 PCYT2Q99447 389 aa26.16■■□□□ 1.78
VAPA-205ENST00000578314 YBX2Q9Y2T7 364 aaKnown RBP26.16■■□□□ 1.78
VAPA-205ENST00000578314 PRUNE2Q8WUY3 3088 aa26.16■■□□□ 1.78
VAPA-205ENST00000578314 EMSYQ7Z589 1322 aa26.15■■□□□ 1.78
VAPA-205ENST00000578314 ATG7O95352 703 aa26.15■■□□□ 1.78
VAPA-205ENST00000578314 RABGGTBP53611 331 aa26.15■■□□□ 1.78
VAPA-205ENST00000578314 ACTR2P61160 394 aa26.15■■□□□ 1.78
VAPA-205ENST00000578314 CPLX2Q6PUV4 134 aaKnown RBP26.15■■□□□ 1.78
VAPA-205ENST00000578314 PLA2G4DQ86XP0 818 aa26.15■■□□□ 1.78
VAPA-205ENST00000578314 NKX2-4Q9H2Z4 354 aa26.15■■□□□ 1.78
VAPA-205ENST00000578314 SCN5AQ14524 2016 aa26.15■■□□□ 1.78
VAPA-205ENST00000578314 TANC1Q9C0D5 1861 aa26.15■■□□□ 1.78
VAPA-205ENST00000578314 DEXIO95424 95 aa26.14■■□□□ 1.78
VAPA-205ENST00000578314 STK3Q13188 491 aa26.14■■□□□ 1.78
VAPA-205ENST00000578314 FAM177A1Q8N128 213 aaPredicted RBP26.14■■□□□ 1.78
VAPA-205ENST00000578314 SLC28A3Q9HAS3 691 aa26.14■■□□□ 1.78
VAPA-205ENST00000578314 TRIP12Q14669 1992 aaPredicted RBP26.13■■□□□ 1.77
VAPA-205ENST00000578314 GBF1Q92538 1859 aa26.13■■□□□ 1.77
VAPA-205ENST00000578314 CUL9Q8IWT3 2517 aa26.13■■□□□ 1.77
VAPA-205ENST00000578314 DHX15O43143 795 aaKnown RBP26.13■■□□□ 1.77
VAPA-205ENST00000578314 CIITAP33076 1130 aa26.13■■□□□ 1.77
VAPA-205ENST00000578314 TCTN1Q2MV58 587 aa26.13■■□□□ 1.77
VAPA-205ENST00000578314 PLPPR4Q7Z2D5 763 aa26.13■■□□□ 1.77
VAPA-205ENST00000578314 RASGRP4Q8TDF6 673 aa26.13■■□□□ 1.77
VAPA-205ENST00000578314 AZI2Q9H6S1 392 aa26.13■■□□□ 1.77
VAPA-205ENST00000578314 DOCK5Q9H7D0 1870 aa26.13■■□□□ 1.77
VAPA-205ENST00000578314 ABHD14A-ACY1A0A1B0GW23 586 aa26.12■■□□□ 1.77
VAPA-205ENST00000578314 MARK3P27448 753 aa26.12■■□□□ 1.77
VAPA-205ENST00000578314 NLRP5P59047 1200 aa26.12■■□□□ 1.77
VAPA-205ENST00000578314 PPFIA1Q13136 1202 aa26.12■■□□□ 1.77
VAPA-205ENST00000578314 RPAINQ86UA6 219 aa26.12■■□□□ 1.77
VAPA-205ENST00000578314 HERC6Q8IVU3 1022 aa26.12■■□□□ 1.77
VAPA-205ENST00000578314 TPCN1Q9ULQ1 816 aa26.12■■□□□ 1.77
VAPA-205ENST00000578314 TET1Q8NFU7 2136 aa26.11■■□□□ 1.77
VAPA-205ENST00000578314 IGKV6D-21A0A0A0MT36 114 aa26.11■■□□□ 1.77
VAPA-205ENST00000578314 MBLAC1A4D2B0 266 aaPredicted RBP26.11■■□□□ 1.77
VAPA-205ENST00000578314 IPO5O00410 1097 aaKnown RBP26.11■■□□□ 1.77
VAPA-205ENST00000578314 PFKFB2O60825 505 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms