RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 TMEM240Q5SV17 173 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 GPR153Q6NV75 609 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 TNPO1Q92973 898 aaKnown RBP13.2□□□□□ -0.3
GGA3-204ENST00000578208 ATP6V0A1Q93050 837 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 AIFM3Q96NN9 605 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 ERAP1Q9NZ08 941 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 LIMCH1Q9UPQ0 1083 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 DOCK5Q9H7D0 1870 aa13.2□□□□□ -0.3
GGA3-204ENST00000578208 EMSYQ7Z589 1322 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 CCDC194A0A1B0GVG4 234 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 GSTTP1A0A1W2PQM5 241 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 IPO5O00410 1097 aaKnown RBP13.19□□□□□ -0.3
GGA3-204ENST00000578208 ADAMTS3O15072 1205 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 SLC34A2O95436 690 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 PARNO95453 639 aaKnown RBP13.19□□□□□ -0.3
GGA3-204ENST00000578208 LARGE1O95461 756 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 ACTN1P12814 892 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 SELPP16109 830 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 MARK3P27448 753 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 USP11P51784 963 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 ACTR2P61160 394 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 ITGB3BPQ13352 177 aaPredicted RBP13.19□□□□□ -0.3
GGA3-204ENST00000578208 NONOQ15233 471 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGA3-204ENST00000578208 PRR16Q569H4 304 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 FAM160B1Q5W0V3 765 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 ZNF365Q70YC5 407 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 LRRC8DQ7L1W4 858 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 CRYGNQ8WXF5 182 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 ZSCAN31Q96LW9 406 aaPredicted RBP13.19□□□□□ -0.3
GGA3-204ENST00000578208 FTOQ9C0B1 505 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGA3-204ENST00000578208 TBC1D22BQ9NU19 505 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 KCNJ14Q9UNX9 436 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 TANC1Q9C0D5 1861 aa13.19□□□□□ -0.3
GGA3-204ENST00000578208 NRCAMQ92823 1304 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 IGLV3-22A0A075B6J6 115 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 ZBBXA8MT70 800 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 BACH1O14867 736 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 ST18O60284 1047 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 CTDNEP1O95476 244 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 IQCF3P0C7M6 154 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 CIITAP33076 1130 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 RBM25P49756 843 aaKnown RBP13.18□□□□□ -0.3
GGA3-204ENST00000578208 SMAD3P84022 425 aaKnown RBP13.18□□□□□ -0.3
GGA3-204ENST00000578208 RBL2Q08999 1139 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 PPFIA1Q13136 1202 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 RABEP1Q15276 862 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 MIS18BP1Q6P0N0 1132 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 DEFB128Q7Z7B8 93 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 NSUN7Q8NE18 718 aaKnown RBP13.18□□□□□ -0.3
GGA3-204ENST00000578208 PHF20Q9BVI0 1012 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 RNPEPQ9H4A4 650 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 TRPC6Q9Y210 931 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 TELO2Q9Y4R8 837 aa13.18□□□□□ -0.3
GGA3-204ENST00000578208 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.17□□□□□ -0.3
GGA3-204ENST00000578208 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.17□□□□□ -0.3
GGA3-204ENST00000578208 LGR5O75473 907 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 CKBP12277 381 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 KRT2P35908 639 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 THPOP40225 353 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 STAT5BP51692 787 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 ZNF200P98182 395 aaPredicted RBP13.17□□□□□ -0.3
GGA3-204ENST00000578208 KRT76Q01546 638 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 ZNF697Q5TEC3 545 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 ZNF746Q6NUN9 644 aaPredicted RBP13.17□□□□□ -0.3
GGA3-204ENST00000578208 C16orf59Q7L2K0 433 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 OTOP2Q7RTS6 562 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 SERINC5Q86VE9 423 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 CCDC83Q8IWF9 413 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 IL27Q8NEV9 243 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 HERVK_113Q902F9 699 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 DHX38Q92620 1227 aaKnown RBP13.17□□□□□ -0.3
GGA3-204ENST00000578208 SH2B1Q9NRF2 756 aaPredicted RBP13.17□□□□□ -0.3
GGA3-204ENST00000578208 SETD4Q9NVD3 440 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
GGA3-204ENST00000578208 TREHO43280 583 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 GAS7O60861 476 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 CAND2O75155 1236 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 HOXC8P31273 242 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 SLC26A2P50443 739 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 FOSBP53539 338 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 GRIK4Q16099 956 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 INF2Q27J81 1249 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 PLPPR4Q7Z2D5 763 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 RSPH3Q86UC2 560 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 SMAP1Q8IYB5 467 aaPredicted RBP13.16□□□□□ -0.3
GGA3-204ENST00000578208 LMBR1Q8WVP7 490 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 UIMC1Q96RL1 719 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 CTAGE1Q96RT6 745 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 NAP1L4Q99733 375 aaKnown RBP13.16□□□□□ -0.3
GGA3-204ENST00000578208 TEKT3Q9BXF9 490 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 SLC4A7Q9Y6M7 1214 aa13.16□□□□□ -0.3
GGA3-204ENST00000578208 RRN3P2A6NIE6 340 aa13.15□□□□□ -0.3
GGA3-204ENST00000578208 RSPH10B2B2RC85 870 aa13.15□□□□□ -0.3
GGA3-204ENST00000578208 M0R2N6 131 aa13.15□□□□□ -0.3
GGA3-204ENST00000578208 JAK2O60674 1132 aa13.15□□□□□ -0.3
GGA3-204ENST00000578208 DTNBO60941 627 aa13.15□□□□□ -0.3
GGA3-204ENST00000578208 ATG7O95352 703 aa13.15□□□□□ -0.3
GGA3-204ENST00000578208 CCNE2O96020 404 aa13.15□□□□□ -0.3
GGA3-204ENST00000578208 PSAPP07602 524 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms