RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CD207Q9UJ71 328 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 PLAGL2Q9UPG8 496 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 ATG2AQ2TAZ0 1938 aa11.74□□□□□ -0.53
NPLOC4-220ENST00000576940 DMDP11532 3685 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 TMEM221A6NGB7 291 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 GCOM1H8Y6P7 765 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 M0R296 226 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 POLR2MP0CAP2 368 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 SP4Q02446 784 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 TCF15Q12870 199 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 SEMA3FQ13275 785 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 BTG3Q14201 252 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 SLC35G1Q2M3R5 365 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 RUFY4Q6ZNE9 571 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 BMP8AQ7Z5Y6 402 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 ADGRD2Q7Z7M1 963 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 HOMER1Q86YM7 354 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 LMBR1Q8WVP7 490 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 CLP1Q92989 425 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 ZNF689Q96CS4 500 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 MSLNLQ96KJ4 702 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 PIGSQ96S52 555 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 EHMT1Q9H9B1 1298 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 RC3H2Q9HBD1 1191 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 CLEC1BQ9P126 229 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 MAD2L2Q9UI95 211 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 MYO15AQ9UKN7 3530 aa11.73□□□□□ -0.53
NPLOC4-220ENST00000576940 ADGRA3Q8IWK6 1321 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 SPATA31C2B4DYI2 1134 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 DGKIO75912 1065 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 ICAM3P32942 547 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 NDUFV1P49821 464 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 PTPN5P54829 565 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 RRP1P56182 461 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 ZXDAP98168 799 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 NEDD9Q14511 834 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 LPIN1Q14693 890 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 IFIT1BQ5T764 474 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 DIEXFQ68CQ4 756 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 CWC27Q6UX04 472 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 METTL7BQ6UX53 244 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 RBM23Q86U06 439 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 RTN4RL1Q86UN2 441 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 SPPL3Q8TCT6 385 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 RWDD3Q9Y3V2 267 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 RALGAPA2Q2PPJ7 1873 aa11.72□□□□□ -0.53
NPLOC4-220ENST00000576940 PALM3A6NDB9 673 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 EYA4O95677 639 aa11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 MMP1P03956 469 aa11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 ITGB1P05556 798 aa11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 MGAT3Q09327 533 aa11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 GNPTABQ3T906 1256 aa11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 TICAM2Q86XR7 235 aa11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 SAMD3Q8N6K7 520 aa11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 DNAJB3Q8WWF6 145 aa11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 AGO3Q9H9G7 860 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 FAM86C1Q9NVL1 165 aa11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 PCDHGC5Q9Y5F6 944 aa11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 MRPL42Q9Y6G3 142 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 DOCK5Q9H7D0 1870 aa11.71□□□□□ -0.53
NPLOC4-220ENST00000576940 COL4A6Q14031 1691 aa11.71□□□□□ -0.54
NPLOC4-220ENST00000576940 BAZ2BQ9UIF8 2168 aaKnown RBP11.71□□□□□ -0.54
NPLOC4-220ENST00000576940 NRCAMQ92823 1304 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 LOC730098B7Z3J9 87 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 CYTH3O43739 400 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 ST18O60284 1047 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 PPFIA3O75145 1194 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 NRIP1P48552 1158 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 MFAP1P55081 439 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 SEC23AQ15436 765 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 FBXO47Q5MNV8 452 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 CYB5R4Q7L1T6 521 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 SUGP1Q8IWZ8 645 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 KLHL23Q8NBE8 558 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 POF1BQ8WVV4 589 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 LINC01599Q8WXQ3 324 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 PIBF1Q8WXW3 757 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 ZBTB10Q96DT7 871 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 RPGRIP1Q96KN7 1286 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 INPP4AQ96PE3 977 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 UBAC1Q9BSL1 405 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 PLVAPQ9BX97 442 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 KRT23Q9C075 422 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 LNPKQ9C0E8 428 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 RIOX1Q9H6W3 641 aa11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 ZNF215Q9UL58 517 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 BARX2Q9UMQ3 279 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-220ENST00000576940 TTC3P53804 2025 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 KAT6AQ92794 2004 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 PER2O15055 1255 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 FIBPO43427 364 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 ATP9AO75110 1047 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 MARK3P27448 753 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 CD52P31358 61 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 NT5C2P49902 561 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 GATMP50440 423 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 VCPP55072 806 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 RBM10P98175 930 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 COASYQ13057 564 aa11.69□□□□□ -0.54
NPLOC4-220ENST00000576940 IMMTQ16891 758 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms