RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-223	ENST00000576932	TXN	P10599	105 aa	Known RBP	10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	GNAT2	P19087	354 aa		10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	TCF15	Q12870	199 aa		10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	PTK7	Q13308	1070 aa		10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	TCTN1	Q2MV58	587 aa		10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	TRIM67	Q6ZTA4	783 aa		10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	RNF135	Q8IUD6	432 aa		10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	SUGP1	Q8IWZ8	645 aa	Known RBP	10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	ANKS1A	Q92625	1134 aa		10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	CCDC97	Q96F63	343 aa	Predicted RBP	10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	CALR3	Q96L12	384 aa	Known RBP	10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	MAF1	Q9H063	256 aa		10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	RANBP17	Q9H2T7	1088 aa	Known RBP	10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	CLDND1	Q9NY35	253 aa		10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	ISY1	Q9ULR0	285 aa	Known RBP	10.9	□□□□□ -0.66
TOM1L1-223	ENST00000576932	TMEM221	A6NGB7	291 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932		M0R296	226 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	MBTPS2	O43462	519 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	CHGB	P05060	677 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	MMP3	P08254	477 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	FBXO45	P0C2W1	286 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	MCC	P23508	829 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	LTBR	P36941	435 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	PDE4B	Q07343	736 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	VAC14	Q08AM6	782 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	SMAD4	Q13485	552 aa	Known RBP	10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	GPM6B	Q13491	265 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	TRIM71	Q2Q1W2	868 aa	Known RBP	10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	TRAF7	Q6Q0C0	670 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	RPAIN	Q86UA6	219 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	FBXO11	Q86XK2	927 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	STK11IP	Q8N1F8	1099 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	EHBP1	Q8NDI1	1231 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	PBXIP1	Q96AQ6	731 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	KATNAL1	Q9BW62	490 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	LMAN2L	Q9H0V9	348 aa		10.89	□□□□□ -0.67
TOM1L1-223	ENST00000576932	PTPDC1	A2A3K4	754 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	C5orf67	F2Z3F1	127 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	NFIB	O00712	420 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	PRDM1	O75626	825 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	RB1	P06400	928 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	CAST	P20810	708 aa	Known RBP	10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	TDO2	P48775	406 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	RALGAPA2	Q2PPJ7	1873 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	FAM117B	Q6P1L5	589 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	CCDC62	Q6P9F0	684 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	BTNL9	Q6UXG8	535 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	EP400NL	Q6ZTU2	488 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	KCTD1	Q719H9	257 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	ERMP1	Q7Z2K6	904 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	TMEM192	Q8IY95	271 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	FBXL6	Q8N531	539 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	C7orf31	Q8N865	590 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	PPP1R13L	Q8WUF5	828 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	APPBP2	Q92624	585 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	KAT2B	Q92831	832 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	COPS5	Q92905	334 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	MYO15A	Q9UKN7	3530 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	PCDHB9	Q9Y5E1	797 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	MYO7A	Q13402	2215 aa		10.88	□□□□□ -0.67
TOM1L1-223	ENST00000576932	PROB1	E7EW31	1015 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	HMMR	O75330	724 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	GH1	P01241	217 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	SLC3A2	P08195	630 aa	Known RBP	10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	NOV	P48745	357 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	SH3BP2	P78314	561 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	TFAP4	Q01664	338 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	MBTPS1	Q14703	1052 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	DGKD	Q16760	1214 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	ZNF618	Q5T7W0	954 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	SLC30A10	Q6XR72	485 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	RNF207	Q6ZRF8	634 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	MYOCD	Q8IZQ8	938 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	DCAF4	Q8WV16	495 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	AFG1L	Q8WV93	481 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	CLEC4D	Q8WXI8	215 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	TOP1MT	Q969P6	601 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	OSBP2	Q969R2	916 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	EMID1	Q96A84	441 aa	Predicted RBP	10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	YME1L1	Q96TA2	773 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	ALG13	Q9NP73	1137 aa	Known RBP	10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	HDAC6	Q9UBN7	1215 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	STX8	Q9UNK0	236 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	RWDD3	Q9Y3V2	267 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	DCHS1	Q96JQ0	3298 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	KMT2E	Q8IZD2	1858 aa		10.87	□□□□□ -0.67
TOM1L1-223	ENST00000576932	RIF1	Q5UIP0	2472 aa	Known RBP	10.86	□□□□□ -0.67
TOM1L1-223	ENST00000576932	STXBP3	O00186	592 aa		10.86	□□□□□ -0.67
TOM1L1-223	ENST00000576932	HAS3	O00219	553 aa		10.86	□□□□□ -0.67
TOM1L1-223	ENST00000576932	GPAA1	O43292	621 aa		10.86	□□□□□ -0.67
TOM1L1-223	ENST00000576932	ARIH2	O95376	493 aa		10.86	□□□□□ -0.67
TOM1L1-223	ENST00000576932	EYA4	O95677	639 aa		10.86	□□□□□ -0.67
TOM1L1-223	ENST00000576932	F2	P00734	622 aa		10.86	□□□□□ -0.67
TOM1L1-223	ENST00000576932	ZFY	P08048	801 aa	Predicted RBP	10.86	□□□□□ -0.67
TOM1L1-223	ENST00000576932	RLBP1	P12271	317 aa		10.86	□□□□□ -0.67
TOM1L1-223	ENST00000576932	CALML3	P27482	149 aa		10.86	□□□□□ -0.67
TOM1L1-223	ENST00000576932	SNAP25	P60880	206 aa		10.86	□□□□□ -0.67
TOM1L1-223	ENST00000576932	RPS6	P62753	249 aa	Known RBP	10.86	□□□□□ -0.67

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