RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.62□□□□□ -0.87
PRPF8-213ENST00000576407 UNC93B1Q9H1C4 597 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 UNC45AQ9H3U1 944 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 DDX20Q9UHI6 824 aaKnown RBP9.62□□□□□ -0.87
PRPF8-213ENST00000576407 TCEAL9Q9UHQ7 104 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 Q9Y3F1 56 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 SRPRBQ9Y5M8 271 aaKnown RBP9.62□□□□□ -0.87
PRPF8-213ENST00000576407 TCHHQ07283 1943 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 ELP1O95163 1332 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 POTEMA6NI47 508 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 EML1O00423 815 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 MSCO60682 206 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 CCL5P13501 91 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 TERF1P54274 439 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 ACTR2P61160 394 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 PDIA5Q14554 519 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 HSDL1Q3SXM5 330 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 LHX8Q68G74 356 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 NCAPH2Q6IBW4 605 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 ZNF746Q6NUN9 644 aaPredicted RBP9.61□□□□□ -0.87
PRPF8-213ENST00000576407 IGSF22Q8N9C0 903 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 OR6J1Q8NGC5 347 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 AFG1LQ8WV93 481 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 ARMC5Q96C12 935 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 CLIC6Q96NY7 704 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 GPR20Q99678 358 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 AP5M1Q9H0R1 490 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 RNF208Q9H0X6 261 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 CSRNP2Q9H175 543 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 PAK6Q9NQU5 681 aaPredicted RBP9.61□□□□□ -0.87
PRPF8-213ENST00000576407 LRWD1Q9UFC0 647 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 PCDHA7Q9UN72 937 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 SAMM50Q9Y512 469 aa9.61□□□□□ -0.87
PRPF8-213ENST00000576407 SYNRGQ9UMZ2 1314 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 GSTTP1A0A1W2PQM5 241 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 A6NJR5 290 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 PP2D1A8MPX8 630 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 WDR64B1ANS9 1081 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 NOP56O00567 594 aaKnown RBP9.6□□□□□ -0.87
PRPF8-213ENST00000576407 CTAGE5O15320 804 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 CUTAO60888 179 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 ATG7O95352 703 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 PGK1P00558 417 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 C6orf222P0C671 652 aaPredicted RBP9.6□□□□□ -0.87
PRPF8-213ENST00000576407 CDC25AP30304 524 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 SFNP31947 248 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 LONP1P36776 959 aaKnown RBP9.6□□□□□ -0.87
PRPF8-213ENST00000576407 JAK3P52333 1124 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 GJA9P57773 515 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 IRX5P78411 483 aaPredicted RBP9.6□□□□□ -0.87
PRPF8-213ENST00000576407 SPECC1Q5M775 1068 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 AXDND1Q5T1B0 1012 aaPredicted RBP9.6□□□□□ -0.87
PRPF8-213ENST00000576407 ABHD15Q6UXT9 468 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 MIER3Q7Z3K6 550 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 SMAP1Q8IYB5 467 aaPredicted RBP9.6□□□□□ -0.87
PRPF8-213ENST00000576407 RDM1Q8NG50 284 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 PPTC7Q8NI37 304 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 SEPT1Q8WYJ6 367 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 AK8Q96MA6 479 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 DEFB118Q96PH6 123 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 GBP4Q96PP9 640 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 RAB34Q9BZG1 259 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 UPF3AQ9H1J1 476 aaKnown RBP9.6□□□□□ -0.87
PRPF8-213ENST00000576407 XPNPEP3Q9NQH7 507 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 DISC1Q9NRI5 854 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 PCDHA10Q9Y5I2 948 aa9.6□□□□□ -0.87
PRPF8-213ENST00000576407 MYADML2A6NDP7 307 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 ADAMTS4O75173 837 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 PPFIA4O75335 1185 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 PSAPP07602 524 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 MMP3P08254 477 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 SUPT20HL2P0C7V6 817 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 HOXD8P13378 290 aaPredicted RBP9.59□□□□□ -0.87
PRPF8-213ENST00000576407 TCF7P36402 384 aaPredicted RBP9.59□□□□□ -0.87
PRPF8-213ENST00000576407 CPT1AP50416 773 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 NKX3-2P78367 333 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 BEX3Q00994 111 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 EPHA7Q15375 998 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 FSCN1Q16658 493 aaKnown RBP9.59□□□□□ -0.87
PRPF8-213ENST00000576407 DGKDQ16760 1214 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 CSPP1Q1MSJ5 1256 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 GNASQ5JWF2 1037 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 ADALQ6DHV7 355 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 SWSAP1Q6NVH7 229 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 MIS18BP1Q6P0N0 1132 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 SHC4Q6S5L8 630 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 USP49Q70CQ1 688 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 MTERF4Q7Z6M4 381 aaKnown RBP9.59□□□□□ -0.87
PRPF8-213ENST00000576407 ZNF579Q8NAF0 562 aaKnown RBP9.59□□□□□ -0.87
PRPF8-213ENST00000576407 TMEM87AQ8NBN3 555 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 EPSTI1Q96J88 318 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 EIF2AK1Q9BQI3 630 aaKnown RBP9.59□□□□□ -0.87
PRPF8-213ENST00000576407 MMTAG2Q9BU76 263 aaKnown RBP9.59□□□□□ -0.87
PRPF8-213ENST00000576407 PDCL3Q9H2J4 239 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 SPC25Q9HBM1 224 aa9.59□□□□□ -0.87
PRPF8-213ENST00000576407 FRMPD3Q5JV73 1810 aa9.59□□□□□ -0.88
PRPF8-213ENST00000576407 IGKV6D-21A0A0A0MT36 114 aa9.58□□□□□ -0.88
PRPF8-213ENST00000576407 BACH1O14867 736 aa9.58□□□□□ -0.88
PRPF8-213ENST00000576407 MED24O75448 989 aa9.58□□□□□ -0.88
PRPF8-213ENST00000576407 MYCNP04198 464 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms