RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 RNF40O75150 1001 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 POLR2FP61218 127 aaKnown RBP9.86□□□□□ -0.83
NCBP3-204ENST00000574911 SHROOM1Q2M3G4 852 aaPredicted RBP9.86□□□□□ -0.83
NCBP3-204ENST00000574911 ANKRD13CQ8N6S4 541 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 GANQ9H2C0 597 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 KANSL2Q9H9L4 492 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 AIPL1Q9NZN9 384 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 TSKSQ9UJT2 592 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 ATAD5Q96QE3 1844 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 AGPSO00116 658 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 TULP2O00295 520 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 TBX3O15119 743 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 PHACTR2O75167 634 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 MMP14P50281 582 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 ARHGAP4P98171 946 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 ADAM9Q13443 819 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 GIT2Q14161 759 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 CERKLQ49MI3 558 aaPredicted RBP9.86□□□□□ -0.83
NCBP3-204ENST00000574911 TDRD12Q587J7 1177 aaKnown RBP9.86□□□□□ -0.83
NCBP3-204ENST00000574911 HAUS3Q68CZ6 603 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 MCTP2Q6DN12 878 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 DPY19L2P1Q6NXN4 242 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 TATDN1Q6P1N9 297 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 CATSPER3Q86XQ3 398 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 HDAC7Q8WUI4 952 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 FAM204AQ9H8W3 233 aa9.86□□□□□ -0.83
NCBP3-204ENST00000574911 DMGDHQ9UI17 866 aaKnown RBP9.86□□□□□ -0.83
NCBP3-204ENST00000574911 POTEFA5A3E0 1075 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 DDTLA6NHG4 134 aaPredicted RBP9.85□□□□□ -0.83
NCBP3-204ENST00000574911 CETN3O15182 167 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 BUB1O43683 1085 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 POTEIP0CG38 1075 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 CAPN2P17655 700 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 ALDH1B1P30837 517 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 APBA1Q02410 837 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 NAB2Q15742 525 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 SLC18A3Q16572 532 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 POTEGQ6S5H5 508 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 POTEEQ6S8J3 1075 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 EPM2AIP1Q7L775 607 aaPredicted RBP9.85□□□□□ -0.83
NCBP3-204ENST00000574911 SH3BP5LQ7L8J4 393 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 SYT2Q8N9I0 419 aaPredicted RBP9.85□□□□□ -0.83
NCBP3-204ENST00000574911 LENG9Q96B70 501 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 IDI2Q9BXS1 227 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 SMARCAL1Q9NZC9 954 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 FAM198AQ9UFP1 575 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 TRAF3IP3Q9Y228 551 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 AFF2P51816 1311 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 KRT18P05783 430 aaKnown RBP9.85□□□□□ -0.83
NCBP3-204ENST00000574911 SPATA31C1P0DKV0 1188 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 TNFRSF8P28908 595 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 CXCR5P32302 372 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 GGCXP38435 758 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 PAFAH1B1P43034 410 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 PSMC6P62333 389 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 RAD51AP2Q09MP3 1159 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 KCNH2Q12809 1159 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 CCDC181Q5TID7 509 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 AFAP1L1Q8TED9 768 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 GDAP1L1Q96MZ0 367 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 CRACR2AQ9BSW2 395 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 AMNQ9BXJ7 453 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 LUC7LQ9NQ29 371 aaKnown RBP9.85□□□□□ -0.83
NCBP3-204ENST00000574911 KCNQ5Q9NR82 932 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 EHD2Q9NZN4 543 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 CWC15Q9P013 229 aaKnown RBP9.85□□□□□ -0.83
NCBP3-204ENST00000574911 PI4KBQ9UBF8 816 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 RNF14Q9UBS8 474 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 PCDHAC2Q9Y5I4 1007 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 STK24Q9Y6E0 443 aa9.85□□□□□ -0.83
NCBP3-204ENST00000574911 FAM196BA6NMK8 535 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 G3V3G9 751 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 NPM3O75607 178 aaKnown RBP9.84□□□□□ -0.83
NCBP3-204ENST00000574911 RPA1P27694 616 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 CASP5P51878 434 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 CACNB3P54284 484 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 FKBP1AP62942 108 aaKnown RBP9.84□□□□□ -0.83
NCBP3-204ENST00000574911 ASIC2Q16515 512 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 DCAF8Q5TAQ9 597 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 MEX3CQ5U5Q3 659 aaKnown RBP9.84□□□□□ -0.83
NCBP3-204ENST00000574911 LEKR1Q6ZMV7 388 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 PODNQ7Z5L7 613 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 FRMD5Q7Z6J6 570 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 GMCL1P1Q8NEA9 526 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 ERMNQ8TAM6 284 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 TBC1D5Q92609 795 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 PSMB7Q99436 277 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 TRPC5Q9UL62 973 aaPredicted RBP9.84□□□□□ -0.83
NCBP3-204ENST00000574911 A0A0U1RQG5 324 aaPredicted RBP9.84□□□□□ -0.83
NCBP3-204ENST00000574911 F5H6K3 240 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 RAD21O60216 631 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 PALMO75781 387 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 CIITAP33076 1130 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 HOXD13P35453 343 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 SREBF1P36956 1147 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 HDLBPQ00341 1268 aaKnown RBP9.84□□□□□ -0.83
NCBP3-204ENST00000574911 KLRC3Q07444 240 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 TCP10Q12799 353 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 RAPGEF1Q13905 1077 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 GLE1Q53GS7 698 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms