RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 UNC45AQ9H3U1 944 aa18.38■□□□□ 0.53
PFN1-203ENST00000574872 PCDHB6Q9Y5E3 794 aa18.38■□□□□ 0.53
PFN1-203ENST00000574872 ELP1O95163 1332 aa18.38■□□□□ 0.53
PFN1-203ENST00000574872 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
PFN1-203ENST00000574872 PSMD10O75832 226 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 F2P00734 622 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 RGS19P49795 217 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 PSEN2P49810 448 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 ITGA7Q13683 1181 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 PKP1Q13835 747 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 TRIM60Q495X7 471 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 BRAPQ7Z569 592 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 FAM20AQ96MK3 541 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 C16orf70Q9BSU1 422 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 HTATIP2Q9BUP3 242 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 ATP11BQ9Y2G3 1177 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 SAMM50Q9Y512 469 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 GRIN2DO15399 1336 aa18.37■□□□□ 0.53
PFN1-203ENST00000574872 PQBP1O60828 265 aaKnown RBP18.36■□□□□ 0.53
PFN1-203ENST00000574872 BAG4O95429 457 aaKnown RBP18.36■□□□□ 0.53
PFN1-203ENST00000574872 MARK3P27448 753 aa18.36■□□□□ 0.53
PFN1-203ENST00000574872 ANP32AP39687 249 aaKnown RBP18.36■□□□□ 0.53
PFN1-203ENST00000574872 RTP1P59025 263 aa18.36■□□□□ 0.53
PFN1-203ENST00000574872 KRT76Q01546 638 aa18.36■□□□□ 0.53
PFN1-203ENST00000574872 MFSD10Q14728 455 aa18.36■□□□□ 0.53
PFN1-203ENST00000574872 KIAA0753Q2KHM9 967 aa18.36■□□□□ 0.53
PFN1-203ENST00000574872 NBPF20Q3BBV1 942 aa18.36■□□□□ 0.53
PFN1-203ENST00000574872 RILPL1Q5EBL4 403 aa18.36■□□□□ 0.53
PFN1-203ENST00000574872 FAM47CQ5HY64 1035 aa18.36■□□□□ 0.53
PFN1-203ENST00000574872 ZNF746Q6NUN9 644 aaPredicted RBP18.36■□□□□ 0.53
PFN1-203ENST00000574872 FAM173BQ6P4H8 233 aa18.36■□□□□ 0.53
PFN1-203ENST00000574872 GLG1Q92896 1179 aa18.36■□□□□ 0.53
PFN1-203ENST00000574872 PCYT2Q99447 389 aa18.36■□□□□ 0.53
PFN1-203ENST00000574872 WDR64B1ANS9 1081 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 H3BRB1 525 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 ARVCFO00192 962 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 BACH1O14867 736 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 TBX3O15119 743 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 SUPT20HL2P0C7V6 817 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 TXKP42681 527 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 MIS18BP1Q6P0N0 1132 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 ABHD15Q6UXT9 468 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 DPF3Q92784 378 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 KATNAL1Q9BW62 490 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 TUT1Q9H6E5 874 aaKnown RBP18.35■□□□□ 0.53
PFN1-203ENST00000574872 VAV3Q9UKW4 847 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 SCN10AQ9Y5Y9 1956 aa18.35■□□□□ 0.53
PFN1-203ENST00000574872 LGR5O75473 907 aa18.34■□□□□ 0.53
PFN1-203ENST00000574872 ATG7O95352 703 aa18.34■□□□□ 0.53
PFN1-203ENST00000574872 OR52Z1P0C646 297 aa18.34■□□□□ 0.53
PFN1-203ENST00000574872 ORC2Q13416 577 aaPredicted RBP18.34■□□□□ 0.53
PFN1-203ENST00000574872 SNX17Q15036 470 aa18.34■□□□□ 0.53
PFN1-203ENST00000574872 MIER3Q7Z3K6 550 aa18.34■□□□□ 0.53
PFN1-203ENST00000574872 CCDC60Q8IWA6 550 aaPredicted RBP18.34■□□□□ 0.53
PFN1-203ENST00000574872 SMAP1Q8IYB5 467 aaPredicted RBP18.34■□□□□ 0.53
PFN1-203ENST00000574872 SLFN12Q8IYM2 578 aa18.34■□□□□ 0.53
PFN1-203ENST00000574872 C7orf61Q8IZ16 206 aa18.34■□□□□ 0.53
PFN1-203ENST00000574872 MTMR9Q96QG7 549 aa18.34■□□□□ 0.53
PFN1-203ENST00000574872 AZI2Q9H6S1 392 aa18.34■□□□□ 0.53
PFN1-203ENST00000574872 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.34■□□□□ 0.53
PFN1-203ENST00000574872 DISC1Q9NRI5 854 aa18.34■□□□□ 0.53
PFN1-203ENST00000574872 ZNF215Q9UL58 517 aaPredicted RBP18.34■□□□□ 0.53
PFN1-203ENST00000574872 EMSYQ7Z589 1322 aa18.33■□□□□ 0.53
PFN1-203ENST00000574872 HAS3O00219 553 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 EML1O00423 815 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 PSAPP07602 524 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 JAK3P52333 1124 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 TLE2Q04725 743 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 PTGDRQ13258 359 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 PPP2R5CQ13362 524 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 NCAPH2Q6IBW4 605 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 SWSAP1Q6NVH7 229 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 FTOQ9C0B1 505 aaKnown RBP eCLIP18.33■□□□□ 0.52
PFN1-203ENST00000574872 SMARCAD1Q9H4L7 1026 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 TTC12Q9H892 705 aaPredicted RBP18.33■□□□□ 0.52
PFN1-203ENST00000574872 ZNF302Q9NR11 478 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 PCDH10Q9P2E7 1040 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 GABBR1Q9UBS5 961 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 PCDHA10Q9Y5I2 948 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 ALPK3Q96L96 1907 aa18.33■□□□□ 0.52
PFN1-203ENST00000574872 EVI5O60447 810 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 ZSCAN22P10073 491 aaPredicted RBP18.32■□□□□ 0.52
PFN1-203ENST00000574872 SFNP31947 248 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 CDK7P50613 346 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 STAT5BP51692 787 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 MLLT1Q03111 559 aaPredicted RBP18.32■□□□□ 0.52
PFN1-203ENST00000574872 FOXD4L6Q3SYB3 417 aaPredicted RBP18.32■□□□□ 0.52
PFN1-203ENST00000574872 FAM160B1Q5W0V3 765 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 PDXDC2PQ6P474 469 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 B3GNT9Q6UX72 402 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 FOXD4L3Q6VB84 417 aaPredicted RBP18.32■□□□□ 0.52
PFN1-203ENST00000574872 TRMT1LQ7Z2T5 733 aaKnown RBP18.32■□□□□ 0.52
PFN1-203ENST00000574872 C7orf31Q8N865 590 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 C4orf32Q8N8J7 132 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 SLC43A3Q8NBI5 491 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 TRMT13Q9NUP7 481 aaKnown RBP18.32■□□□□ 0.52
PFN1-203ENST00000574872 ERAP1Q9NZ08 941 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 HDAC6Q9UBN7 1215 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 PCDHA12Q9UN75 941 aa18.32■□□□□ 0.52
PFN1-203ENST00000574872 IGKV6D-21A0A0A0MT36 114 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms