RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 TIGD1Q96MW7 591 aa26.98■■□□□ 1.91
ATPAF1-213ENST00000574428 TNMDQ9H2S6 317 aa26.98■■□□□ 1.91
ATPAF1-213ENST00000574428 RGL1Q9NZL6 768 aa26.98■■□□□ 1.91
ATPAF1-213ENST00000574428 SAMM50Q9Y512 469 aa26.98■■□□□ 1.91
ATPAF1-213ENST00000574428 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 CYP2C19P33261 490 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 NAALADL2Q58DX5 795 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 CCDC62Q6P9F0 684 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 CATSPER3Q86XQ3 398 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 PYM1Q9BRP8 204 aaKnown RBP26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 BEGAINQ9BUH8 593 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 SLC9A2Q9UBY0 812 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 ZHX1Q9UKY1 873 aaPredicted RBP26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 KDM3AQ9Y4C1 1321 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 SPATA31C1P0DKV0 1188 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 ACVR2BQ13705 512 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 TTLL4Q14679 1199 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 TMEM119Q4V9L6 283 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 ZNF746Q6NUN9 644 aaPredicted RBP26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 PDXDC2PQ6P474 469 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 CEP57L1Q8IYX8 460 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 ZNF296Q8WUU4 475 aaPredicted RBP26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 DYDC2Q96IM9 177 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 ABHD16BQ9H3Z7 469 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 STK24Q9Y6E0 443 aa26.97■■□□□ 1.91
ATPAF1-213ENST00000574428 POTEFA5A3E0 1075 aa26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 FKTNO75072 461 aa26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 GGPS1O95749 300 aa26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 SLFN14P0C7P3 912 aa26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 TXNP10599 105 aaKnown RBP26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 RPA1P27694 616 aa26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 NEDD9Q14511 834 aa26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 EPHA7Q15375 998 aa26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 ZSCAN23Q3MJ62 389 aa26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 PRAMEF19Q5SWL8 479 aa26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 POTEGQ6S5H5 508 aa26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 GRAMD1CQ8IYS0 662 aa26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 KIAA1024Q9UPX6 916 aa26.96■■□□□ 1.91
ATPAF1-213ENST00000574428 WDR64B1ANS9 1081 aa26.95■■□□□ 1.9
ATPAF1-213ENST00000574428 FOXN1O15353 648 aa26.95■■□□□ 1.9
ATPAF1-213ENST00000574428 XRCC5P13010 732 aaKnown RBP26.95■■□□□ 1.9
ATPAF1-213ENST00000574428 ADCYAP1R1P41586 468 aa26.95■■□□□ 1.9
ATPAF1-213ENST00000574428 JAK3P52333 1124 aa26.95■■□□□ 1.9
ATPAF1-213ENST00000574428 CTTNQ14247 550 aaKnown RBP26.95■■□□□ 1.9
ATPAF1-213ENST00000574428 HYIQ5T013 277 aa26.95■■□□□ 1.9
ATPAF1-213ENST00000574428 GIMAP8Q8ND71 665 aaPredicted RBP26.95■■□□□ 1.9
ATPAF1-213ENST00000574428 HSD17B14Q9BPX1 270 aa26.95■■□□□ 1.9
ATPAF1-213ENST00000574428 POLR3CQ9BUI4 534 aaPredicted RBP26.95■■□□□ 1.9
ATPAF1-213ENST00000574428 USP25Q9UHP3 1055 aa26.95■■□□□ 1.9
ATPAF1-213ENST00000574428 FARP2O94887 1054 aaPredicted RBP26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 PTGS1P23219 599 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 ACTR2P61160 394 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 KCNK18Q7Z418 384 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 BANK1Q8NDB2 785 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 ERCC4Q92889 916 aaPredicted RBP26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 COPS5Q92905 334 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 RBM47A0AV96 593 aaKnown RBP26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 SLC26A4O43511 780 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 SLITRK3O94933 977 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 IGHA2P01877 340 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 SFNP31947 248 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 CKAP2LQ8IYA6 745 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 DNAJC5GQ8N7S2 189 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 ERO1AQ96HE7 468 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 NT5C3AQ9H0P0 336 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 TUFT1Q9NNX1 390 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 CEP350Q5VT06 3117 aa26.94■■□□□ 1.9
ATPAF1-213ENST00000574428 A0A087WWV3 80 aa26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 AFMP43652 599 aa26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 CELF3Q5SZQ8 465 aaKnown RBP26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 GJC2Q5T442 439 aaPredicted RBP26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 METTL7BQ6UX53 244 aa26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 TPH2Q8IWU9 490 aa26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 SMAP1Q8IYB5 467 aaPredicted RBP26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 TRIB2Q92519 343 aa26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 STAMQ92783 540 aa26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 PAGE5Q96GU1 130 aa26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 MLXIPQ9HAP2 919 aa26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 BLOC1S4Q9NUP1 217 aa26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 SRRDQ9UH36 339 aa26.93■■□□□ 1.9
ATPAF1-213ENST00000574428 SYCE3A1L190 88 aa26.92■■□□□ 1.9
ATPAF1-213ENST00000574428 CCDC144BQ3MJ40 725 aa26.92■■□□□ 1.9
ATPAF1-213ENST00000574428 LXNQ9BS40 222 aa26.92■■□□□ 1.9
ATPAF1-213ENST00000574428 WRAP73Q9P2S5 460 aaPredicted RBP26.92■■□□□ 1.9
ATPAF1-213ENST00000574428 PCDHA10Q9Y5I2 948 aa26.92■■□□□ 1.9
ATPAF1-213ENST00000574428 PNOCQ13519 176 aa26.92■■□□□ 1.9
ATPAF1-213ENST00000574428 RDM1Q8NG50 284 aa26.92■■□□□ 1.9
ATPAF1-213ENST00000574428 WBP1LQ9NX94 342 aa26.92■■□□□ 1.9
ATPAF1-213ENST00000574428 STK17AQ9UEE5 414 aa26.92■■□□□ 1.9
ATPAF1-213ENST00000574428 E9PMD0 336 aa26.91■■□□□ 1.9
ATPAF1-213ENST00000574428 CTAGE5O15320 804 aa26.91■■□□□ 1.9
ATPAF1-213ENST00000574428 PRR29P0C7W0 189 aa26.91■■□□□ 1.9
ATPAF1-213ENST00000574428 HOXD10P28358 340 aa26.91■■□□□ 1.9
ATPAF1-213ENST00000574428 UGCGQ16739 394 aa26.91■■□□□ 1.9
ATPAF1-213ENST00000574428 DHX37Q8IY37 1157 aaKnown RBP26.91■■□□□ 1.9
ATPAF1-213ENST00000574428 NEK9Q8TD19 979 aa26.91■■□□□ 1.9
ATPAF1-213ENST00000574428 MTRQ99707 1265 aa26.91■■□□□ 1.9
ATPAF1-213ENST00000574428 CUEDC2Q9H467 287 aa26.91■■□□□ 1.9
ATPAF1-213ENST00000574428 CASP8AP2Q9UKL3 1982 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms