RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 C17orf102A2RUQ5 167 aa19.81■□□□□ 0.76
SMG6-212ENST00000573153 MEIS1O00470 390 aa19.81■□□□□ 0.76
SMG6-212ENST00000573153 NOP56O00567 594 aaKnown RBP19.81■□□□□ 0.76
SMG6-212ENST00000573153 LGR5O75473 907 aa19.81■□□□□ 0.76
SMG6-212ENST00000573153 WDR5P61964 334 aaKnown RBP19.81■□□□□ 0.76
SMG6-212ENST00000573153 FGD1P98174 961 aa19.81■□□□□ 0.76
SMG6-212ENST00000573153 SP4Q02446 784 aa19.81■□□□□ 0.76
SMG6-212ENST00000573153 AP3B2Q13367 1082 aa19.81■□□□□ 0.76
SMG6-212ENST00000573153 SPRED2Q7Z698 418 aa19.81■□□□□ 0.76
SMG6-212ENST00000573153 CCDC155Q8N6L0 562 aa19.81■□□□□ 0.76
SMG6-212ENST00000573153 SLC17A8Q8NDX2 589 aa19.81■□□□□ 0.76
SMG6-212ENST00000573153 LMBR1Q8WVP7 490 aa19.81■□□□□ 0.76
SMG6-212ENST00000573153 NCOA5Q9HCD5 579 aaKnown RBP19.81■□□□□ 0.76
SMG6-212ENST00000573153 SETD4Q9NVD3 440 aa19.81■□□□□ 0.76
SMG6-212ENST00000573153 PKD2L1Q9P0L9 805 aa19.81■□□□□ 0.76
SMG6-212ENST00000573153 EMSYQ7Z589 1322 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 ZBBXA8MT70 800 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 FAM86B1E9PN63 330 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 MAFGO15525 162 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 PPFIA3O75145 1194 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 BAIAP3O94812 1187 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 FAM86B2P0C5J1 330 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 IFNAR1P17181 557 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 DEFB103AP81534 67 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 UTP14CQ5TAP6 766 aaKnown RBP19.8■□□□□ 0.76
SMG6-212ENST00000573153 GIMAP8Q8ND71 665 aaPredicted RBP19.8■□□□□ 0.76
SMG6-212ENST00000573153 MAFAQ8NHW3 353 aaPredicted RBP19.8■□□□□ 0.76
SMG6-212ENST00000573153 CDHR1Q96JP9 859 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 SLC9A7Q96T83 725 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 GLT8D2Q9H1C3 349 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 PRDM12Q9H4Q4 367 aa19.8■□□□□ 0.76
SMG6-212ENST00000573153 AGO4Q9HCK5 861 aaKnown RBP19.8■□□□□ 0.76
SMG6-212ENST00000573153 NFASCO94856 1347 aa19.79■□□□□ 0.76
SMG6-212ENST00000573153 REV3LO60673 3130 aa19.79■□□□□ 0.76
SMG6-212ENST00000573153 DHX15O43143 795 aaKnown RBP19.79■□□□□ 0.76
SMG6-212ENST00000573153 FOSP01100 380 aaPredicted RBP19.79■□□□□ 0.76
SMG6-212ENST00000573153 FOSL2P15408 326 aa19.79■□□□□ 0.76
SMG6-212ENST00000573153 ARHGAP4P98171 946 aa19.79■□□□□ 0.76
SMG6-212ENST00000573153 CEP55Q53EZ4 464 aa19.79■□□□□ 0.76
SMG6-212ENST00000573153 MARCH8Q5T0T0 291 aa19.79■□□□□ 0.76
SMG6-212ENST00000573153 CNKSR3Q6P9H4 555 aa19.79■□□□□ 0.76
SMG6-212ENST00000573153 TMCO2Q7Z6W1 182 aaPredicted RBP19.79■□□□□ 0.76
SMG6-212ENST00000573153 HERC6Q8IVU3 1022 aa19.79■□□□□ 0.76
SMG6-212ENST00000573153 PHOSPHO2Q8TCD6 241 aa19.79■□□□□ 0.76
SMG6-212ENST00000573153 ATP6V0A1Q93050 837 aa19.79■□□□□ 0.76
SMG6-212ENST00000573153 IL17RAQ96F46 866 aa19.79■□□□□ 0.76
SMG6-212ENST00000573153 RNF26Q9BY78 433 aaPredicted RBP19.79■□□□□ 0.76
SMG6-212ENST00000573153 UPF3BQ9BZI7 483 aaKnown RBP19.79■□□□□ 0.76
SMG6-212ENST00000573153 SPTBN5Q9NRC6 3674 aaKnown RBP19.79■□□□□ 0.76
SMG6-212ENST00000573153 MICAL3Q7RTP6 2002 aa19.78■□□□□ 0.76
SMG6-212ENST00000573153 MBLAC1A4D2B0 266 aaPredicted RBP19.78■□□□□ 0.76
SMG6-212ENST00000573153 EPOPA6NHQ4 379 aa19.78■□□□□ 0.76
SMG6-212ENST00000573153 ATG7O95352 703 aa19.78■□□□□ 0.76
SMG6-212ENST00000573153 PARNO95453 639 aaKnown RBP19.78■□□□□ 0.76
SMG6-212ENST00000573153 CCNE2O96020 404 aa19.78■□□□□ 0.76
SMG6-212ENST00000573153 CA3P07451 260 aa19.78■□□□□ 0.76
SMG6-212ENST00000573153 CYP3A4P08684 503 aa19.78■□□□□ 0.76
SMG6-212ENST00000573153 NPY5RQ15761 445 aa19.78■□□□□ 0.76
SMG6-212ENST00000573153 JAKMIP3Q5VZ66 844 aa19.78■□□□□ 0.76
SMG6-212ENST00000573153 SEPT1Q8WYJ6 367 aa19.78■□□□□ 0.76
SMG6-212ENST00000573153 LENG9Q96B70 501 aa19.78■□□□□ 0.76
SMG6-212ENST00000573153 FTOQ9C0B1 505 aaKnown RBP eCLIP19.78■□□□□ 0.76
SMG6-212ENST00000573153 MSRAQ9UJ68 235 aa19.78■□□□□ 0.76
SMG6-212ENST00000573153 TRANK1O15050 2925 aa19.78■□□□□ 0.76
SMG6-212ENST00000573153 IGKV6D-21A0A0A0MT36 114 aa19.77■□□□□ 0.76
SMG6-212ENST00000573153 ACTN1P12814 892 aa19.77■□□□□ 0.76
SMG6-212ENST00000573153 CCT2P78371 535 aaKnown RBP19.77■□□□□ 0.76
SMG6-212ENST00000573153 MGAT3Q09327 533 aa19.77■□□□□ 0.76
SMG6-212ENST00000573153 PLEKHG4Q58EX7 1191 aa19.77■□□□□ 0.76
SMG6-212ENST00000573153 FAM26DQ5JW98 314 aa19.77■□□□□ 0.76
SMG6-212ENST00000573153 RUFY4Q6ZNE9 571 aa19.77■□□□□ 0.76
SMG6-212ENST00000573153 NIPA1Q7RTP0 329 aa19.77■□□□□ 0.76
SMG6-212ENST00000573153 RPAINQ86UA6 219 aa19.77■□□□□ 0.76
SMG6-212ENST00000573153 RASGRP4Q8TDF6 673 aa19.77■□□□□ 0.76
SMG6-212ENST00000573153 LARP6Q9BRS8 491 aaKnown RBP19.77■□□□□ 0.76
SMG6-212ENST00000573153 JPH1Q9HDC5 661 aaPredicted RBP19.77■□□□□ 0.76
SMG6-212ENST00000573153 ZNF215Q9UL58 517 aaPredicted RBP19.77■□□□□ 0.76
SMG6-212ENST00000573153 NAP1L2Q9ULW6 460 aaPredicted RBP19.77■□□□□ 0.76
SMG6-212ENST00000573153 CYP46A1Q9Y6A2 500 aa19.77■□□□□ 0.76
SMG6-212ENST00000573153 VCANP13611 3396 aa19.77■□□□□ 0.75
SMG6-212ENST00000573153 NRCAMQ92823 1304 aa19.76■□□□□ 0.75
SMG6-212ENST00000573153 LCHNA4D1U4 455 aa19.76■□□□□ 0.75
SMG6-212ENST00000573153 CAND2O75155 1236 aa19.76■□□□□ 0.75
SMG6-212ENST00000573153 THPOP40225 353 aa19.76■□□□□ 0.75
SMG6-212ENST00000573153 DBF4BQ8NFT6 615 aa19.76■□□□□ 0.75
SMG6-212ENST00000573153 ZBTB10Q96DT7 871 aa19.76■□□□□ 0.75
SMG6-212ENST00000573153 EHMT1Q9H9B1 1298 aa19.76■□□□□ 0.75
SMG6-212ENST00000573153 SLC9A2Q9UBY0 812 aa19.76■□□□□ 0.75
SMG6-212ENST00000573153 COL4A4P53420 1690 aaPredicted RBP19.75■□□□□ 0.75
SMG6-212ENST00000573153 RSPH10B2B2RC85 870 aa19.75■□□□□ 0.75
SMG6-212ENST00000573153 M0R2N6 131 aa19.75■□□□□ 0.75
SMG6-212ENST00000573153 RSPH10BP0C881 870 aa19.75■□□□□ 0.75
SMG6-212ENST00000573153 MARK3P27448 753 aa19.75■□□□□ 0.75
SMG6-212ENST00000573153 ACTR2P61160 394 aa19.75■□□□□ 0.75
SMG6-212ENST00000573153 TAP1Q03518 808 aa19.75■□□□□ 0.75
SMG6-212ENST00000573153 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMG6-212ENST00000573153 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMG6-212ENST00000573153 ZNF274Q96GC6 653 aaPredicted RBP19.75■□□□□ 0.75
SMG6-212ENST00000573153 SLC26A6Q9BXS9 759 aa19.75■□□□□ 0.75
SMG6-212ENST00000573153 SLC28A3Q9HAS3 691 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms