RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 LCTP09848 1927 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 SNAI1O95863 264 aaPredicted RBP13.36□□□□□ -0.27
CDRT1-206ENST00000571263 HTRA3P83110 453 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 KARSQ15046 597 aaKnown RBP13.36□□□□□ -0.27
CDRT1-206ENST00000571263 E2F4Q16254 413 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 TMEM119Q4V9L6 283 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 CCDC62Q6P9F0 684 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 CATSPER3Q86XQ3 398 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 DHX58Q96C10 678 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 PANK2Q9BZ23 570 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 GTPBP4Q9BZE4 634 aaKnown RBP13.36□□□□□ -0.27
CDRT1-206ENST00000571263 ZSWIM4Q9H7M6 989 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
CDRT1-206ENST00000571263 TMEM63CQ9P1W3 806 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 SRRDQ9UH36 339 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 SERTAD1Q9UHV2 236 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 PLXNA1Q9UIW2 1896 aa13.36□□□□□ -0.27
CDRT1-206ENST00000571263 PP2D1A8MPX8 630 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 ACTN4O43707 911 aaKnown RBP13.35□□□□□ -0.27
CDRT1-206ENST00000571263 SLITRK3O94933 977 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 SMC2O95347 1197 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 ATG7O95352 703 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 LYPLA2O95372 231 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 GH1P01241 217 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 IGHA2P01877 340 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 CDC25AP30304 524 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 QARSP47897 775 aaKnown RBP13.35□□□□□ -0.27
CDRT1-206ENST00000571263 FLT3LGP49771 235 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 PSMC5P62195 406 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 ZRSR1Q15695 479 aaKnown RBP13.35□□□□□ -0.27
CDRT1-206ENST00000571263 CELF3Q5SZQ8 465 aaKnown RBP13.35□□□□□ -0.27
CDRT1-206ENST00000571263 TAPT1Q6NXT6 567 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 RBM43Q6ZSC3 357 aaKnown RBP13.35□□□□□ -0.27
CDRT1-206ENST00000571263 SV2BQ7L1I2 683 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 EEPD1Q7L9B9 569 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 FBXO16Q8IX29 292 aaPredicted RBP13.35□□□□□ -0.27
CDRT1-206ENST00000571263 DHX37Q8IY37 1157 aaKnown RBP13.35□□□□□ -0.27
CDRT1-206ENST00000571263 PXYLP1Q8TE99 480 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 SEPT1Q8WYJ6 367 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 ATP6V0A1Q93050 837 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 GJA10Q969M2 543 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 CCDC47Q96A33 483 aaKnown RBP13.35□□□□□ -0.27
CDRT1-206ENST00000571263 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
CDRT1-206ENST00000571263 KATNBL1Q9H079 304 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 PKD2L1Q9P0L9 805 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 KIAA1024Q9UPX6 916 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 Q9Y3F1 56 aa13.35□□□□□ -0.27
CDRT1-206ENST00000571263 DDX39AO00148 427 aaKnown RBP13.34□□□□□ -0.27
CDRT1-206ENST00000571263 EML1O00423 815 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 NOP56O00567 594 aaKnown RBP13.34□□□□□ -0.27
CDRT1-206ENST00000571263 CHMP2AO43633 222 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 FARP2O94887 1054 aaPredicted RBP13.34□□□□□ -0.27
CDRT1-206ENST00000571263 GGPS1O95749 300 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 SPATA31C1P0DKV0 1188 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 PLCG1P19174 1290 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 UBA1P22314 1058 aaKnown RBP13.34□□□□□ -0.27
CDRT1-206ENST00000571263 SLC26A2P50443 739 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 ACTR2P61160 394 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 SP2Q02086 613 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 GRB10Q13322 594 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 POSTNQ15063 836 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 DUSP28Q4G0W2 176 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 FAM160B1Q5W0V3 765 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 PDXDC2PQ6P474 469 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 SASS6Q6UVJ0 657 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 ABHD15Q6UXT9 468 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 CYFIP1Q7L576 1253 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 OTUD6AQ7L8S5 288 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 SH3RF1Q7Z6J0 888 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 C4orf19Q8IY42 314 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 LARP4BQ92615 738 aaKnown RBP13.34□□□□□ -0.27
CDRT1-206ENST00000571263 PAGE5Q96GU1 130 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 PNMA5Q96PV4 448 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 KBTBD4Q9NVX7 518 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 KCND2Q9NZV8 630 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 FAM184BQ9ULE4 1060 aa13.34□□□□□ -0.27
CDRT1-206ENST00000571263 MGAMO43451 1857 aa13.33□□□□□ -0.27
CDRT1-206ENST00000571263 KIAA1217Q5T5P2 1943 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 GTPBP6O43824 516 aaPredicted RBP13.33□□□□□ -0.28
CDRT1-206ENST00000571263 MED24O75448 989 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 EYA4O95677 639 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 CAVIN2O95810 425 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 SUPT20HL2P0C7V6 817 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 CTGFP29279 349 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 TNFAIP2Q03169 654 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 LY6KQ17RY6 165 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 ZSCAN23Q3MJ62 389 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 BRDTQ58F21 947 aaPredicted RBP13.33□□□□□ -0.28
CDRT1-206ENST00000571263 CNNM4Q6P4Q7 775 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 TPH2Q8IWU9 490 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 TRIML1Q8N9V2 468 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 RAD54LQ92698 747 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 DYDC2Q96IM9 177 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 AZI2Q9H6S1 392 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 ANKEF1Q9NU02 776 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 RMND1Q9NWS8 449 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 WBP1LQ9NX94 342 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 KIAA1468Q9P260 1216 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 ZHX1Q9UKY1 873 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms