RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 PROM2Q8N271 834 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 SLC44A5Q8NCS7 719 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 HPCAL4Q9UM19 191 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 LEMD3Q9Y2U8 911 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 PSMD14O00487 310 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 IFNB1P01574 187 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 ATP2B4P23634 1241 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 CDK8P49336 464 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 DCUN1D2Q6PH85 259 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 DPH6Q7L8W6 267 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 CCDC13Q8IYE1 715 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 ZNF512BQ96KM6 892 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 FERMT1Q9BQL6 677 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 CAMTA1Q9Y6Y1 1673 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 COL5A2P05997 1499 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 ZKSCAN8Q15776 578 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 KCTD1Q719H9 257 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 TEKT1Q969V4 418 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 CCDC127Q96BQ5 260 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 PACSIN2Q9UNF0 486 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 STAMBPO95630 424 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 TTLL1O95922 423 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 FOSP01100 380 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 FGGP02679 453 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 NT5C2P49902 561 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 TOB1P50616 345 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 RASSF2P50749 326 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 SCNN1DP51172 638 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 EIF3BP55884 814 aaKnown RBP12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 VPS52Q8N1B4 723 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 HPS3Q969F9 1004 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 TFR2Q9UP52 801 aa12.1□□□□□ -0.47
PCDHGA4-201ENST00000571252 K7ENM7 598 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 CHUKO15111 745 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 ERVK-24P63145 666 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 SMIM5Q71RC9 77 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 SH2D3CQ8N5H7 860 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 SUPT20HQ8NEM7 779 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 HOOK2Q96ED9 719 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 AMNQ9BXJ7 453 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 BARHL2Q9NY43 387 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 MINPP1Q9UNW1 487 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 SALL1Q9NSC2 1324 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 PRPF6O94906 941 aaKnown RBP12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 MYL7Q01449 175 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 ANKRD20A3Q5VUR7 823 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 RSRC2Q7L4I2 434 aaKnown RBP12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 CPXCR1Q8N123 301 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 STAG2Q8N3U4 1231 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 KLHL29Q96CT2 875 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 DDX47Q9H0S4 455 aaKnown RBP12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 MARF1Q9Y4F3 1742 aaKnown RBP12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 FRMD3A2A2Y4 597 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 ORC4O43929 436 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 STK4Q13043 487 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 CCDC38Q502W7 563 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 MSANTD4Q8NCY6 345 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 IWS1Q96ST2 819 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 POLD4Q9HCU8 107 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 ZNF446Q9NWS9 450 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 SERPINB13Q9UIV8 391 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 XDHP47989 1333 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 DCCP43146 1447 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 H3BQF6 201 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 RHOBTB3O94955 611 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 TRIM37O94972 964 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 GCKP35557 465 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 DR1Q01658 176 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 CERKLQ49MI3 558 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 PPP4R3CPQ6ZMV5 832 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 KSR1Q8IVT5 923 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 FLAD1Q8NFF5 587 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 SLC4A9Q96Q91 983 aa12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 TYW1Q9NV66 732 aaKnown RBP12.09□□□□□ -0.47
PCDHGA4-201ENST00000571252 MYCLP12524 364 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 ZNF18P17022 549 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 IRAK1P51617 712 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 GUCY1A3Q02108 690 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 ICA1Q05084 483 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 KCNH2Q12809 1159 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 FAM133BQ5BKY9 247 aaKnown RBP12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 GRK7Q8WTQ7 553 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 ZMYND12Q9H0C1 365 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 KIF1AQ12756 1690 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 HSPA6P17066 643 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 GUCY2CP25092 1073 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 GRM4Q14833 912 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 CCDC62Q6P9F0 684 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 CAPN12Q6ZSI9 719 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 SH3RF3Q8TEJ3 882 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 ATP6V1G3Q96LB4 118 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 CEP63Q96MT8 703 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 TAF1DQ9H5J8 278 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 GMNCA6NCL1 334 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 CCDC160A6NGH7 325 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 RASGRF2O14827 1237 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 FOXP2O15409 715 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms