RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 SDF4Q9BRK5 362 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 ORC3Q9UBD5 711 aaPredicted RBP12.68□□□□□ -0.38
SMG6-206ENST00000570668 SLC9A2Q9UBY0 812 aa12.68□□□□□ -0.38
SMG6-206ENST00000570668 ZNF215Q9UL58 517 aaPredicted RBP12.68□□□□□ -0.38
SMG6-206ENST00000570668 TRIP12Q14669 1992 aaPredicted RBP12.67□□□□□ -0.38
SMG6-206ENST00000570668 EDIL3O43854 480 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 SMIM10L2AP0DMW4 78 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 SMIM10L2BP0DMW5 78 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 FDPSP14324 419 aaKnown RBP12.67□□□□□ -0.38
SMG6-206ENST00000570668 XBP1P17861 261 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 SETQ01105 290 aaPredicted RBP12.67□□□□□ -0.38
SMG6-206ENST00000570668 PTK7Q13308 1070 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 HIC1Q14526 733 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 RASIP1Q5U651 963 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 PSRC1Q6PGN9 363 aaPredicted RBP12.67□□□□□ -0.38
SMG6-206ENST00000570668 RPUSD2Q8IZ73 545 aaKnown RBP12.67□□□□□ -0.38
SMG6-206ENST00000570668 CCDC155Q8N6L0 562 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 NSUN7Q8NE18 718 aaKnown RBP12.67□□□□□ -0.38
SMG6-206ENST00000570668 AFAP1L1Q8TED9 768 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 WASF1Q92558 559 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 DHX38Q92620 1227 aaKnown RBP12.67□□□□□ -0.38
SMG6-206ENST00000570668 VWCEQ96DN2 955 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 SCLYQ96I15 445 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 RNPC3Q96LT9 517 aaKnown RBP12.67□□□□□ -0.38
SMG6-206ENST00000570668 PHF20Q9BVI0 1012 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 RNPEPQ9H4A4 650 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 LIMCH1Q9UPQ0 1083 aa12.67□□□□□ -0.38
SMG6-206ENST00000570668 EMSYQ7Z589 1322 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 C17orf102A2RUQ5 167 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 IPO5O00410 1097 aaKnown RBP12.66□□□□□ -0.38
SMG6-206ENST00000570668 DHX15O43143 795 aaKnown RBP12.66□□□□□ -0.38
SMG6-206ENST00000570668 DTNBO60941 627 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 LGR5O75473 907 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 ATG7O95352 703 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 PFKMP08237 780 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 IQCF3P0C7M6 154 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 ACRP10323 421 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 RFC2P35250 354 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 ACTR2P61160 394 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 ZNF200P98182 395 aaPredicted RBP12.66□□□□□ -0.38
SMG6-206ENST00000570668 ST3GAL1Q11201 340 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 ZNF365Q70YC5 407 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 SERINC5Q86VE9 423 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 TBCKQ8TEA7 893 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 LENG9Q96B70 501 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 PCYT2Q99447 389 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 SMARCAD1Q9H4L7 1026 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 ERAP1Q9NZ08 941 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 KCNJ14Q9UNX9 436 aa12.66□□□□□ -0.38
SMG6-206ENST00000570668 CCNE2O96020 404 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 FGBP02675 491 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 GNAT1P11488 350 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 SELPP16109 830 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 ADAM17P78536 824 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 TRIM71Q2Q1W2 868 aaKnown RBP12.65□□□□□ -0.38
SMG6-206ENST00000570668 PRR16Q569H4 304 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 KRT25Q7Z3Z0 450 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 HERVK_113Q902F9 699 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 GLG1Q92896 1179 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 ATP6V0A1Q93050 837 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 ZNF577Q9BSK1 485 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 UPF2Q9HAU5 1272 aaKnown RBP12.65□□□□□ -0.38
SMG6-206ENST00000570668 GJB4Q9NTQ9 266 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 TBC1D22BQ9NU19 505 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 SETD4Q9NVD3 440 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 KAT6AQ92794 2004 aa12.65□□□□□ -0.38
SMG6-206ENST00000570668 NRCAMQ92823 1304 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 SCN5AQ14524 2016 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 TET1Q8NFU7 2136 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 TANC1Q9C0D5 1861 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 CYP3A7-CYP3A51PA0A087WV96 503 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 IGKV6D-21A0A0A0MT36 114 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 TREHO43280 583 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 JAK2O60674 1132 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 PARNO95453 639 aaKnown RBP12.64□□□□□ -0.39
SMG6-206ENST00000570668 CKBP12277 381 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 CYP3A7P24462 503 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 SMAD3P84022 425 aaKnown RBP12.64□□□□□ -0.39
SMG6-206ENST00000570668 NONOQ15233 471 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMG6-206ENST00000570668 RABEP1Q15276 862 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 MOXD1Q6UVY6 613 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 ABHD15Q6UXT9 468 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 LRRC8DQ7L1W4 858 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 PLPPR4Q7Z2D5 763 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 IL27Q8NEV9 243 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 LMBR1Q8WVP7 490 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 WNT8BQ93098 351 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 ZSCAN31Q96LW9 406 aaPredicted RBP12.64□□□□□ -0.39
SMG6-206ENST00000570668 MBOAT7Q96N66 472 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 AZI2Q9H6S1 392 aa12.64□□□□□ -0.39
SMG6-206ENST00000570668 SH2B1Q9NRF2 756 aaPredicted RBP12.64□□□□□ -0.39
SMG6-206ENST00000570668 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.63□□□□□ -0.39
SMG6-206ENST00000570668 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.63□□□□□ -0.39
SMG6-206ENST00000570668 DDX39AO00148 427 aaKnown RBP12.63□□□□□ -0.39
SMG6-206ENST00000570668 MSH4O15457 936 aa12.63□□□□□ -0.39
SMG6-206ENST00000570668 MARK3P27448 753 aa12.63□□□□□ -0.39
SMG6-206ENST00000570668 SLC26A2P50443 739 aa12.63□□□□□ -0.39
SMG6-206ENST00000570668 STAT5BP51692 787 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms