RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 ZFR2Q9UPR6 939 aaKnown RBP7.56□□□□□ -1.2
CHD9-220ENST00000569794 NPIPB8E9PQR5 432 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 MSCO60682 206 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 DDAH1O94760 285 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 FAHP16930 419 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 MFAP1P55081 439 aaKnown RBP7.55□□□□□ -1.2
CHD9-220ENST00000569794 MAP4K2Q12851 820 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 MIIPQ5JXC2 388 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 RNF207Q6ZRF8 634 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 REXO1L1PQ8IX06 675 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 RBM12BQ8IXT5 1001 aaKnown RBP7.55□□□□□ -1.2
CHD9-220ENST00000569794 IFNL2Q8IZJ0 200 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 STPG3Q8N7X2 389 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 MICAL1Q8TDZ2 1067 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 ADOQ96SZ5 270 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 PDGFDQ9GZP0 370 aaPredicted RBP7.55□□□□□ -1.2
CHD9-220ENST00000569794 KATNBL1Q9H079 304 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 KCND1Q9NSA2 647 aa7.55□□□□□ -1.2
CHD9-220ENST00000569794 PPARGC1AQ9UBK2 798 aaKnown RBP7.55□□□□□ -1.2
CHD9-220ENST00000569794 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
CHD9-220ENST00000569794 TUSC3Q13454 348 aa7.54□□□□□ -1.2
CHD9-220ENST00000569794 PAN2Q504Q3 1202 aaKnown RBP7.54□□□□□ -1.2
CHD9-220ENST00000569794 OTOP3Q7RTS5 596 aa7.54□□□□□ -1.2
CHD9-220ENST00000569794 GIMAP8Q8ND71 665 aaPredicted RBP7.54□□□□□ -1.2
CHD9-220ENST00000569794 KCTD13Q8WZ19 329 aa7.54□□□□□ -1.2
CHD9-220ENST00000569794 ARHGAP20Q9P2F6 1191 aa7.54□□□□□ -1.2
CHD9-220ENST00000569794 GLRBP48167 497 aa7.53□□□□□ -1.2
CHD9-220ENST00000569794 FHL2Q14192 279 aa7.53□□□□□ -1.2
CHD9-220ENST00000569794 FXNQ16595 210 aa7.53□□□□□ -1.2
CHD9-220ENST00000569794 TAX1BP1Q86VP1 789 aa7.53□□□□□ -1.2
CHD9-220ENST00000569794 UHMK1Q8TAS1 419 aaKnown RBP7.53□□□□□ -1.2
CHD9-220ENST00000569794 ZNF503Q96F45 646 aa7.53□□□□□ -1.2
CHD9-220ENST00000569794 CCSER2Q9H7U1 834 aa7.53□□□□□ -1.2
CHD9-220ENST00000569794 LTFP02788 710 aa7.52□□□□□ -1.21
CHD9-220ENST00000569794 ENO2P09104 434 aaPredicted RBP7.52□□□□□ -1.21
CHD9-220ENST00000569794 PPP2R2AP63151 447 aa7.52□□□□□ -1.21
CHD9-220ENST00000569794 PFKPQ01813 784 aa7.52□□□□□ -1.21
CHD9-220ENST00000569794 SLC10A6Q3KNW5 377 aa7.52□□□□□ -1.21
CHD9-220ENST00000569794 CD276Q5ZPR3 534 aa7.52□□□□□ -1.21
CHD9-220ENST00000569794 EDAQ92838 391 aa7.52□□□□□ -1.21
CHD9-220ENST00000569794 NEIL1Q96FI4 390 aaPredicted RBP7.52□□□□□ -1.21
CHD9-220ENST00000569794 EPN3Q9H201 632 aa7.52□□□□□ -1.21
CHD9-220ENST00000569794 PRKAG3Q9UGI9 489 aa7.52□□□□□ -1.21
CHD9-220ENST00000569794 PTPN22Q9Y2R2 807 aa7.52□□□□□ -1.21
CHD9-220ENST00000569794 TELO2Q9Y4R8 837 aa7.52□□□□□ -1.21
CHD9-220ENST00000569794 TGFB2P61812 414 aa7.51□□□□□ -1.21
CHD9-220ENST00000569794 USP10Q14694 798 aaKnown RBP7.51□□□□□ -1.21
CHD9-220ENST00000569794 NRN1LQ496H8 165 aa7.51□□□□□ -1.21
CHD9-220ENST00000569794 IGFL4Q6B9Z1 124 aa7.51□□□□□ -1.21
CHD9-220ENST00000569794 RSPO2Q6UXX9 243 aaPredicted RBP7.51□□□□□ -1.21
CHD9-220ENST00000569794 EEPD1Q7L9B9 569 aa7.51□□□□□ -1.21
CHD9-220ENST00000569794 MRRFQ96E11 262 aaKnown RBP7.51□□□□□ -1.21
CHD9-220ENST00000569794 IER2Q9BTL4 223 aa7.51□□□□□ -1.21
CHD9-220ENST00000569794 PHF20Q9BVI0 1012 aa7.51□□□□□ -1.21
CHD9-220ENST00000569794 ZNF839A8K0R7 811 aa7.5□□□□□ -1.21
CHD9-220ENST00000569794 H0Y858 1186 aa7.5□□□□□ -1.21
CHD9-220ENST00000569794 DLX3O60479 287 aa7.5□□□□□ -1.21
CHD9-220ENST00000569794 IL18BPO95998 194 aa7.5□□□□□ -1.21
CHD9-220ENST00000569794 SSBP05455 408 aaKnown RBP eCLIP7.5□□□□□ -1.21
CHD9-220ENST00000569794 ZNF888P0CJ79 500 aaPredicted RBP7.5□□□□□ -1.21
CHD9-220ENST00000569794 COMTP21964 271 aa7.5□□□□□ -1.21
CHD9-220ENST00000569794 USP39Q53GS9 565 aaKnown RBP7.5□□□□□ -1.21
CHD9-220ENST00000569794 AGBL4Q5VU57 503 aa7.5□□□□□ -1.21
CHD9-220ENST00000569794 NUB1Q9Y5A7 615 aa7.5□□□□□ -1.21
CHD9-220ENST00000569794 A0A1W2PQU0 124 aa7.49□□□□□ -1.21
CHD9-220ENST00000569794 AGRPO00253 132 aa7.49□□□□□ -1.21
CHD9-220ENST00000569794 COL6A2P12110 1019 aa7.49□□□□□ -1.21
CHD9-220ENST00000569794 GRK2P25098 689 aa7.49□□□□□ -1.21
CHD9-220ENST00000569794 GRK3P35626 688 aa7.49□□□□□ -1.21
CHD9-220ENST00000569794 SPIRE1Q08AE8 756 aa7.49□□□□□ -1.21
CHD9-220ENST00000569794 HABP4Q5JVS0 413 aaKnown RBP7.49□□□□□ -1.21
CHD9-220ENST00000569794 USP53Q70EK8 1073 aa7.49□□□□□ -1.21
CHD9-220ENST00000569794 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.49□□□□□ -1.21
CHD9-220ENST00000569794 FUKQ8N0W3 1084 aa7.49□□□□□ -1.21
CHD9-220ENST00000569794 NKRFO15226 690 aaKnown RBP eCLIP7.48□□□□□ -1.21
CHD9-220ENST00000569794 GJB6O95452 261 aa7.48□□□□□ -1.21
CHD9-220ENST00000569794 GNAT1P11488 350 aa7.48□□□□□ -1.21
CHD9-220ENST00000569794 ETFBP38117 255 aa7.48□□□□□ -1.21
CHD9-220ENST00000569794 RAC3P60763 192 aa7.48□□□□□ -1.21
CHD9-220ENST00000569794 ABHD18Q0P651 414 aa7.48□□□□□ -1.21
CHD9-220ENST00000569794 ZNF568Q3ZCX4 644 aa7.48□□□□□ -1.21
CHD9-220ENST00000569794 LBX2Q6XYB7 198 aa7.48□□□□□ -1.21
CHD9-220ENST00000569794 EXTL1Q92935 676 aa7.48□□□□□ -1.21
CHD9-220ENST00000569794 TACO1Q9BSH4 297 aaKnown RBP7.48□□□□□ -1.21
CHD9-220ENST00000569794 CARD11Q9BXL7 1154 aa7.48□□□□□ -1.21
CHD9-220ENST00000569794 CAPN10Q9HC96 672 aa7.48□□□□□ -1.21
CHD9-220ENST00000569794 RAD17O75943 681 aa7.47□□□□□ -1.21
CHD9-220ENST00000569794 ZNF202O95125 648 aa7.47□□□□□ -1.21
CHD9-220ENST00000569794 EPHA5P54756 1037 aa7.47□□□□□ -1.21
CHD9-220ENST00000569794 KIZQ2M2Z5 673 aa7.47□□□□□ -1.21
CHD9-220ENST00000569794 KCNJ15Q99712 375 aa7.47□□□□□ -1.21
CHD9-220ENST00000569794 KIAA1522Q9P206 1035 aaPredicted RBP7.47□□□□□ -1.21
CHD9-220ENST00000569794 DSEQ9UL01 958 aa7.47□□□□□ -1.21
CHD9-220ENST00000569794 PLSCR1O15162 318 aa7.46□□□□□ -1.22
CHD9-220ENST00000569794 NARSO43776 548 aaKnown RBP7.46□□□□□ -1.22
CHD9-220ENST00000569794 POLD1P28340 1107 aa7.46□□□□□ -1.22
CHD9-220ENST00000569794 Q6ZSN1 163 aa7.46□□□□□ -1.22
CHD9-220ENST00000569794 CHFRQ96EP1 664 aa7.46□□□□□ -1.22
CHD9-220ENST00000569794 CSRNP2Q9H175 543 aa7.46□□□□□ -1.22
CHD9-220ENST00000569794 C11orf21Q9P2W6 132 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms