RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 LPAR1Q92633 364 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 GOLGA1Q92805 767 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 HOOK2Q96ED9 719 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 RPGRIP1Q96KN7 1286 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 PLIN2Q99541 437 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 POLR3CQ9BUI4 534 aaPredicted RBP6.35□□□□□ -1.39
CDH13-213ENST00000569454 TTYH3Q9C0H2 523 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 MAF1Q9H063 256 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 RANBP17Q9H2T7 1088 aaKnown RBP6.35□□□□□ -1.39
CDH13-213ENST00000569454 NDST4Q9H3R1 872 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 VCPKMTQ9H867 229 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 TUFT1Q9NNX1 390 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 KCNQ5Q9NR82 932 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 PANK4Q9NVE7 773 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 MAP3K20Q9NYL2 800 aaKnown RBP6.35□□□□□ -1.39
CDH13-213ENST00000569454 SEL1LQ9UBV2 794 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 ZNF70Q9UC06 446 aaPredicted RBP6.35□□□□□ -1.39
CDH13-213ENST00000569454 FEM1BQ9UK73 627 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 FAM184BQ9ULE4 1060 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 PRR12Q9ULL5 1215 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 DNM3Q9UQ16 869 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 MAPK8IP1Q9UQF2 711 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 DAAM1Q9Y4D1 1078 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 MRFAP1Q9Y605 127 aa6.35□□□□□ -1.39
CDH13-213ENST00000569454 EPN1Q9Y6I3 576 aaPredicted RBP6.35□□□□□ -1.39
CDH13-213ENST00000569454 TTC26A0AVF1 554 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 ANO9A1A5B4 782 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 EIF3CLB5ME19 914 aaKnown RBP6.34□□□□□ -1.39
CDH13-213ENST00000569454 USP17L15C9J2P7 530 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 USP17L13C9JLJ4 530 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 USP17L11C9JVI0 530 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 USP17L18D6R9N7 530 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 USP17L22D6RA61 530 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 USP17L17D6RBQ6 530 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 USP17L19D6RCP7 530 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 USP17L20D6RJB6 530 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 GCOM1H8Y6P7 765 aaPredicted RBP6.34□□□□□ -1.39
CDH13-213ENST00000569454 C21orf2O43822 256 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 RAD21O60216 631 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 TBCAO75347 108 aaKnown RBP6.34□□□□□ -1.39
CDH13-213ENST00000569454 CLSTN1O94985 981 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 PLA2G4BP0C869 781 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 POLR2MP0CAP2 368 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 FCER1AP12319 257 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 ZNF76P36508 570 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 PMS1P54277 932 aaKnown RBP6.34□□□□□ -1.39
CDH13-213ENST00000569454 FAM193AP78312 1265 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 MAP3K10Q02779 954 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 USP17L24Q0WX57 530 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 PDAP1Q13442 181 aaKnown RBP6.34□□□□□ -1.39
CDH13-213ENST00000569454 TNIP1Q15025 636 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 ELF2Q15723 593 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 WHAMMP3Q1A5X7 153 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 KIF4BQ2VIQ3 1234 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 VWA3BQ502W6 1294 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 ZCWPW2Q504Y3 356 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 PRR16Q569H4 304 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 MIIPQ5JXC2 388 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 IQCEQ6IPM2 695 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 GPR153Q6NV75 609 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 USP17L6PQ6QN14 398 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 LRRC55Q6ZSA7 311 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 NIPA1Q7RTP0 329 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 GPBP1Q86WP2 473 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 SIAH1Q8IUQ4 282 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 CREBRFQ8IUR6 639 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 ZC3H3Q8IXZ2 948 aaKnown RBP6.34□□□□□ -1.39
CDH13-213ENST00000569454 CPLX3Q8WVH0 158 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 RABGGTAQ92696 567 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 SYN2Q92777 582 aaPredicted RBP6.34□□□□□ -1.39
CDH13-213ENST00000569454 KIFC2Q96AC6 838 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 DNAJC19Q96DA6 116 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 PRMT6Q96LA8 375 aaPredicted RBP6.34□□□□□ -1.39
CDH13-213ENST00000569454 PCMTD1Q96MG8 357 aaPredicted RBP6.34□□□□□ -1.39
CDH13-213ENST00000569454 EIF3CQ99613 913 aaKnown RBP6.34□□□□□ -1.39
CDH13-213ENST00000569454 NAPGQ99747 312 aaPredicted RBP6.34□□□□□ -1.39
CDH13-213ENST00000569454 DESI2Q9BSY9 194 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 SEMA6BQ9H3T3 888 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 MRPL44Q9H9J2 332 aaKnown RBP6.34□□□□□ -1.39
CDH13-213ENST00000569454 SLC39A2Q9NP94 309 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 OGFRQ9NZT2 677 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 CDC23Q9UJX2 597 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 PLAGL2Q9UPG8 496 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 KIAA1024Q9UPX6 916 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 COL4A3BPQ9Y5P4 624 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 CHD8Q9HCK8 2581 aa6.34□□□□□ -1.39
CDH13-213ENST00000569454 CNTNAP1P78357 1384 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 MYH7BA7E2Y1 1941 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 ATP8B3O60423 1300 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 LTBP3Q9NS15 1303 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 SSU72P8A0A1W2PR75 194 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 FAM196BA6NMK8 535 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 POTECB2RU33 542 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 PSMD14O00487 310 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 CETN3O15182 167 aa6.33□□□□□ -1.4
CDH13-213ENST00000569454 WDR46O15213 610 aaKnown RBP6.33□□□□□ -1.4
CDH13-213ENST00000569454 EIF3DO15371 548 aaKnown RBP eCLIP6.33□□□□□ -1.4
CDH13-213ENST00000569454 SLC16A3O15427 465 aaKnown RBP6.33□□□□□ -1.4
CDH13-213ENST00000569454 CALUO43852 315 aaPredicted RBP6.33□□□□□ -1.4
CDH13-213ENST00000569454 EDIL3O43854 480 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms