RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 IQCF3P0C7M6 154 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 SMIM10L2AP0DMW4 78 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 SMIM10L2BP0DMW5 78 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 RFC2P35250 354 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 TCF7P36402 384 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-225ENST00000569245 NLRP5P59047 1200 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 ZNF200P98182 395 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-225ENST00000569245 ZNF697Q5TEC3 545 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 TRIM50Q86XT4 487 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 CAGE1Q8TC20 777 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 SEPT1Q8WYJ6 367 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 GLG1Q92896 1179 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 FAM161BQ96MY7 647 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 LLPHQ9BRT6 129 aaKnown RBP16.47■□□□□ 0.23
COMMD4-225ENST00000569245 JPH1Q9HDC5 661 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-225ENST00000569245 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-225ENST00000569245 ZBBXA8MT70 800 aa16.46■□□□□ 0.23
COMMD4-225ENST00000569245 CDKL5O76039 1030 aa16.46■□□□□ 0.23
COMMD4-225ENST00000569245 DEXIO95424 95 aa16.46■□□□□ 0.23
COMMD4-225ENST00000569245 PFKMP08237 780 aa16.46■□□□□ 0.23
COMMD4-225ENST00000569245 ARP10275 920 aa16.46■□□□□ 0.23
COMMD4-225ENST00000569245 PTK7Q13308 1070 aa16.46■□□□□ 0.23
COMMD4-225ENST00000569245 RASGRP4Q8TDF6 673 aa16.46■□□□□ 0.23
COMMD4-225ENST00000569245 AFAP1L1Q8TED9 768 aa16.46■□□□□ 0.23
COMMD4-225ENST00000569245 HERVK_113Q902F9 699 aa16.46■□□□□ 0.23
COMMD4-225ENST00000569245 ATP6V0A1Q93050 837 aa16.46■□□□□ 0.23
COMMD4-225ENST00000569245 SH3GLB2Q9NR46 395 aa16.46■□□□□ 0.23
COMMD4-225ENST00000569245 MEIS1O00470 390 aa16.45■□□□□ 0.22
COMMD4-225ENST00000569245 ADAMTS3O15072 1205 aa16.45■□□□□ 0.22
COMMD4-225ENST00000569245 GNAT1P11488 350 aa16.45■□□□□ 0.22
COMMD4-225ENST00000569245 ACTN1P12814 892 aa16.45■□□□□ 0.22
COMMD4-225ENST00000569245 SELPP16109 830 aa16.45■□□□□ 0.22
COMMD4-225ENST00000569245 FAM109BQ6ICB4 259 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-225ENST00000569245 LRRC8DQ7L1W4 858 aa16.45■□□□□ 0.22
COMMD4-225ENST00000569245 CTAGE1Q96RT6 745 aa16.45■□□□□ 0.22
COMMD4-225ENST00000569245 AGO4Q9HCK5 861 aaKnown RBP16.45■□□□□ 0.22
COMMD4-225ENST00000569245 CXXC1Q9P0U4 656 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-225ENST00000569245 SLC9A2Q9UBY0 812 aa16.45■□□□□ 0.22
COMMD4-225ENST00000569245 GSTTP1A0A1W2PQM5 241 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 CKBP12277 381 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 MARK3P27448 753 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 THPOP40225 353 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 HIC1Q14526 733 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 NIPA1Q7RTP0 329 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 PLA2G4DQ86XP0 818 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 SPRYD3Q8NCJ5 442 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 DHX38Q92620 1227 aaKnown RBP16.44■□□□□ 0.22
COMMD4-225ENST00000569245 UIMC1Q96RL1 719 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 RNPEPQ9H4A4 650 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 SMARCAD1Q9H4L7 1026 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 AZI2Q9H6S1 392 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 SETD4Q9NVD3 440 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 SLC4A7Q9Y6M7 1214 aa16.44■□□□□ 0.22
COMMD4-225ENST00000569245 GRXCR1A8MXD5 290 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 FAM86B1E9PN63 330 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 DDX39AO00148 427 aaKnown RBP16.43■□□□□ 0.22
COMMD4-225ENST00000569245 CTDNEP1O95476 244 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 CYP3A4P08684 503 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 FAM86B2P0C5J1 330 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 DDIT3P35638 169 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 RASIP1Q5U651 963 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 SERINC5Q86VE9 423 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 NSUN7Q8NE18 718 aaKnown RBP16.43■□□□□ 0.22
COMMD4-225ENST00000569245 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 MTMR10Q9NXD2 777 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 ERAP1Q9NZ08 941 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 PCDHA4Q9UN74 947 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 SMC3Q9UQE7 1217 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 MYH7BA7E2Y1 1941 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 NFASCO94856 1347 aa16.43■□□□□ 0.22
COMMD4-225ENST00000569245 TREHO43280 583 aa16.42■□□□□ 0.22
COMMD4-225ENST00000569245 PARNO95453 639 aaKnown RBP16.42■□□□□ 0.22
COMMD4-225ENST00000569245 DNAJB2P25686 324 aa16.42■□□□□ 0.22
COMMD4-225ENST00000569245 ACTR2P61160 394 aa16.42■□□□□ 0.22
COMMD4-225ENST00000569245 HMGN5P82970 282 aaKnown RBP16.42■□□□□ 0.22
COMMD4-225ENST00000569245 ITGB3BPQ13352 177 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-225ENST00000569245 PRR16Q569H4 304 aa16.42■□□□□ 0.22
COMMD4-225ENST00000569245 ZNF618Q5T7W0 954 aa16.42■□□□□ 0.22
COMMD4-225ENST00000569245 WNT8BQ93098 351 aa16.42■□□□□ 0.22
COMMD4-225ENST00000569245 VWCEQ96DN2 955 aa16.42■□□□□ 0.22
COMMD4-225ENST00000569245 AIFM3Q96NN9 605 aa16.42■□□□□ 0.22
COMMD4-225ENST00000569245 ZNF577Q9BSK1 485 aa16.42■□□□□ 0.22
COMMD4-225ENST00000569245 SEMA6BQ9H3T3 888 aa16.42■□□□□ 0.22
COMMD4-225ENST00000569245 MSRAQ9UJ68 235 aa16.42■□□□□ 0.22
COMMD4-225ENST00000569245 IPO5O00410 1097 aaKnown RBP16.41■□□□□ 0.22
COMMD4-225ENST00000569245 XBP1P17861 261 aa16.41■□□□□ 0.22
COMMD4-225ENST00000569245 SETQ01105 290 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-225ENST00000569245 PPFIA1Q13136 1202 aa16.41■□□□□ 0.22
COMMD4-225ENST00000569245 TRIM71Q2Q1W2 868 aaKnown RBP16.41■□□□□ 0.22
COMMD4-225ENST00000569245 BLIDQ8IZY5 108 aa16.41■□□□□ 0.22
COMMD4-225ENST00000569245 CRYGNQ8WXF5 182 aa16.41■□□□□ 0.22
COMMD4-225ENST00000569245 TIFAQ96CG3 184 aa16.41■□□□□ 0.22
COMMD4-225ENST00000569245 TCEAL9Q9UHQ7 104 aa16.41■□□□□ 0.22
COMMD4-225ENST00000569245 NRCAMQ92823 1304 aa16.41■□□□□ 0.22
COMMD4-225ENST00000569245 IGLV3-22A0A075B6J6 115 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 RSPH10B2B2RC85 870 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 BACH1O14867 736 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 DTNBO60941 627 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 RSPH10BP0C881 870 aa16.4■□□□□ 0.22
COMMD4-225ENST00000569245 ATP2A2P16615 1042 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms