RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 WASF3Q9UPY6 502 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 GLI2P10070 1586 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 KIAA0586Q9BVV6 1533 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 KRIT1O00522 736 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 WNT9AO14904 365 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 RASGRP1O95267 797 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 LRG1P02750 347 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 SRGAP2CP0DJJ0 459 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 CYP2C8P10632 490 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 PYGMP11217 842 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 GRIN1Q05586 938 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 PAK1Q13153 545 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 SMAD4Q13485 552 aaKnown RBP4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 TRIM61Q5EBN2 209 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 TEPPQ6URK8 271 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 SAPCD2Q86UD0 394 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 TMEM151BQ8IW70 566 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 LINC01356Q8N9X3 169 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 UHMK1Q8TAS1 419 aaKnown RBP4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 RBPJLQ9UBG7 517 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 CBLCQ9ULV8 474 aa4.93□□□□□ -1.62
HMGB1P6-201ENST00000569046 EPRSP07814 1512 aaKnown RBP4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 BMP7P18075 431 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 ITGA1P56199 1179 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 CAP1Q01518 475 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 TUSC3Q13454 348 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 CYP4F22Q6NT55 531 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 BRAPQ7Z569 592 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 FGD2Q7Z6J4 655 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 LINC00482Q8N8I6 264 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 PHOSPHO1Q8TCT1 267 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 ZBTB8AQ96BR9 441 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 TOE1Q96GM8 510 aaKnown RBP4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 RNPC3Q96LT9 517 aaKnown RBP4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 CLUHP3Q96NS8 147 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 C11orf84Q9BUA3 381 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 CD244Q9BZW8 370 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 NCOA5Q9HCD5 579 aaKnown RBP4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 TRIM39Q9HCM9 518 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 DSEQ9UL01 958 aa4.92□□□□□ -1.62
HMGB1P6-201ENST00000569046 CCDC163A0A0D9SF12 145 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 PPP1R12AO14974 1030 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 KCNQ2O43526 872 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 RAPGEF3O95398 923 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 AMY2AP04746 511 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 CKMP06732 381 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 AMY2BP19961 511 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 SPIRE1Q08AE8 756 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 ADAM9Q13443 819 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 RTP5Q14D33 572 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 FBLN7Q53RD9 439 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 ZC3H18Q86VM9 953 aaKnown RBP4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 OSTM1Q86WC4 334 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 PROSER1Q86XN7 944 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 NLGN1Q8N2Q7 840 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 MARCH10Q8NA82 808 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 SYT8Q8NBV8 401 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 FBXW5Q969U6 566 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 KCNC2Q96PR1 638 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 YIPF4Q9BSR8 244 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 MRPL4Q9BYD3 311 aaKnown RBP4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 SFMBT1Q9UHJ3 866 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 PLB1Q6P1J6 1458 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 IQGAP2Q13576 1575 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 TNIKQ9UKE5 1360 aa4.91□□□□□ -1.62
HMGB1P6-201ENST00000569046 RIMS1Q86UR5 1692 aaKnown RBP4.9□□□□□ -1.62
HMGB1P6-201ENST00000569046 LMTK3Q96Q04 1460 aa4.9□□□□□ -1.62
HMGB1P6-201ENST00000569046 ESYT3A0FGR9 886 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 SH3D21A4FU49 640 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 ACOT7O00154 380 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 KCNK3O14649 394 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 MAFKO60675 156 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 EFCAB14O75071 495 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 PDE6AP16499 860 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 KCNA6P17658 529 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 EPHA5P54756 1037 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 JAM2P57087 298 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 NKX3-2P78367 333 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 ABHD17CQ6PCB6 329 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 LIPIQ6XZB0 460 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 ARHGAP36Q6ZRI8 547 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 KCTD1Q719H9 257 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 C16orf59Q7L2K0 433 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 ZC3H7AQ8IWR0 971 aaKnown RBP4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 KYQ8NBH2 561 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 TTLL11Q8NHH1 800 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 CATSPERZQ9NTU4 200 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 TMEM260Q9NX78 707 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 SRPK3Q9UPE1 567 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 COQ6Q9Y2Z9 468 aa4.9□□□□□ -1.63
HMGB1P6-201ENST00000569046 CFAP43Q8NDM7 1665 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 UACAQ9BZF9 1416 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 DISP1Q96F81 1524 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 TCRBV16S1A1N1A0A5B0 115 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 CCDC66A2RUB6 948 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 FAM90A27PA6NNH2 459 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 BTBD11A6QL63 1104 aa4.89□□□□□ -1.63
HMGB1P6-201ENST00000569046 ZNF561-AS1K7EIQ3 104 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms