RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 HSDL1Q3SXM5 330 aa13.86□□□□□ -0.19
VPS9D1-207ENST00000568691 SYTL5Q8TDW5 730 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-207ENST00000568691 SMOC2Q9H3U7 446 aa13.86□□□□□ -0.19
VPS9D1-207ENST00000568691 FRYLO94915 3013 aa13.85□□□□□ -0.19
VPS9D1-207ENST00000568691 RNF113AO15541 343 aaKnown RBP13.85□□□□□ -0.19
VPS9D1-207ENST00000568691 SORBS3O60504 671 aa13.85□□□□□ -0.19
VPS9D1-207ENST00000568691 ZFYP08048 801 aaPredicted RBP13.85□□□□□ -0.19
VPS9D1-207ENST00000568691 NRIP1P48552 1158 aa13.85□□□□□ -0.19
VPS9D1-207ENST00000568691 CTDSPL2Q05D32 466 aa13.85□□□□□ -0.19
VPS9D1-207ENST00000568691 CRIPAKQ8N1N5 446 aa13.85□□□□□ -0.19
VPS9D1-207ENST00000568691 RGS22Q8NE09 1264 aa13.85□□□□□ -0.19
VPS9D1-207ENST00000568691 KATNAL1Q9BW62 490 aa13.85□□□□□ -0.19
VPS9D1-207ENST00000568691 BCAS3Q9H6U6 928 aa13.85□□□□□ -0.19
VPS9D1-207ENST00000568691 WDR19Q8NEZ3 1342 aa13.85□□□□□ -0.19
VPS9D1-207ENST00000568691 APPP05067 770 aa13.84□□□□□ -0.19
VPS9D1-207ENST00000568691 SP2Q02086 613 aa13.84□□□□□ -0.19
VPS9D1-207ENST00000568691 RABEP1Q15276 862 aa13.84□□□□□ -0.19
VPS9D1-207ENST00000568691 MYSM1Q5VVJ2 828 aa13.84□□□□□ -0.19
VPS9D1-207ENST00000568691 RBM23Q86U06 439 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-207ENST00000568691 DHX37Q8IY37 1157 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-207ENST00000568691 ATP8B4Q8TF62 1192 aa13.84□□□□□ -0.19
VPS9D1-207ENST00000568691 CPVLQ9H3G5 476 aa13.84□□□□□ -0.19
VPS9D1-207ENST00000568691 ANO2Q9NQ90 1003 aa13.84□□□□□ -0.19
VPS9D1-207ENST00000568691 MRPL42Q9Y6G3 142 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-207ENST00000568691 CFAP47Q6ZTR5 3102 aa13.84□□□□□ -0.19
VPS9D1-207ENST00000568691 CEP250Q9BV73 2442 aa13.84□□□□□ -0.19
VPS9D1-207ENST00000568691 ACACBO00763 2458 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 PDHBP11177 359 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 ATF7P17544 494 aaPredicted RBP13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 GNAT2P19087 354 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 LAMC2Q13753 1193 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 FAM26DQ5JW98 314 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 LINC01599Q8WXQ3 324 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 GPKOWQ92917 476 aaPredicted RBP eCLIP13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 ATP6V0A1Q93050 837 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 NKD2Q969F2 451 aaPredicted RBP13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 SNX21Q969T3 373 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 TMEM47Q9BQJ4 181 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 PLVAPQ9BX97 442 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 S1PR5Q9H228 398 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 RNPEPQ9H4A4 650 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 CDH22Q9UJ99 828 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 KIAA1217Q5T5P2 1943 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 CCDC171Q6TFL3 1326 aa13.83□□□□□ -0.2
VPS9D1-207ENST00000568691 C17orf102A2RUQ5 167 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 TSPY2A6NKD2 308 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 ENPP3O14638 875 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 PPFIA4O75335 1185 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 DGKIO75912 1065 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 BRD1O95696 1058 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 CHRNA1P02708 482 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 SMIM10L2AP0DMW4 78 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 SMIM10L2BP0DMW5 78 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 SNHG28P0DPA3 235 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 ADAM17P78536 824 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 NMIQ13287 307 aaPredicted RBP13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 KCNC3Q14003 757 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 USH1GQ495M9 461 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 CWC27Q6UX04 472 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 KLHL23Q8NBE8 558 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 P2RX5Q93086 422 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 CNTNAP3BQ96NU0 1288 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 KIF2CQ99661 725 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 CNTNAP3Q9BZ76 1288 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 LSG1Q9H089 658 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 EHMT1Q9H9B1 1298 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 HELLSQ9NRZ9 838 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 RWDD3Q9Y3V2 267 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 TELO2Q9Y4R8 837 aa13.82□□□□□ -0.2
VPS9D1-207ENST00000568691 PER2O15055 1255 aa13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 FGRP09769 529 aa13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 EIF2AK2P19525 551 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 ZNF543Q08ER8 600 aa13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 BTG3Q14201 252 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 STXBP2Q15833 593 aa13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 CELF3Q5SZQ8 465 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 KREMEN2Q8NCW0 462 aa13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 NSUN6Q8TEA1 469 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 POF1BQ8WVV4 589 aa13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 APBB2Q92870 758 aa13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 MPHOSPH6Q99547 160 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 DAXXQ9UER7 740 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 TTC3P53804 2025 aa13.81□□□□□ -0.2
VPS9D1-207ENST00000568691 KIAA1671Q9BY89 1806 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 A0A0D9SFI3 127 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 OPLAHO14841 1288 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 CAND2O75155 1236 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 SP100P23497 879 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 HSPA4P34932 840 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 MGAT3Q09327 533 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 LPIN1Q14693 890 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 ZMYM1Q5SVZ6 1142 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 SYCE2Q6PIF2 218 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 RTN4RL1Q86UN2 441 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 IWS1Q96ST2 819 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 RMDN3Q96TC7 470 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 IL25Q9H293 177 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 SETD4Q9NVD3 440 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 MRVI1Q9Y6F6 885 aa13.8□□□□□ -0.2
VPS9D1-207ENST00000568691 CHD6Q8TD26 2715 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms