RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 MAFGO15525 162 aa21.67■■□□□ 1.06
SPSB3-210ENST00000568416 HMGB1P09429 215 aaKnown RBP21.67■■□□□ 1.06
SPSB3-210ENST00000568416 RCAN1P53805 252 aa21.67■■□□□ 1.06
SPSB3-210ENST00000568416 NAPAP54920 295 aa21.67■■□□□ 1.06
SPSB3-210ENST00000568416 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.67■■□□□ 1.06
SPSB3-210ENST00000568416 LMBR1Q8WVP7 490 aa21.67■■□□□ 1.06
SPSB3-210ENST00000568416 RAD9AQ99638 391 aa21.67■■□□□ 1.06
SPSB3-210ENST00000568416 EHMT1Q9H9B1 1298 aa21.67■■□□□ 1.06
SPSB3-210ENST00000568416 V9GY48 417 aaPredicted RBP21.67■■□□□ 1.06
SPSB3-210ENST00000568416 NRCAMQ92823 1304 aa21.66■■□□□ 1.06
SPSB3-210ENST00000568416 hCG_1984214I3L0E3 225 aa21.66■■□□□ 1.06
SPSB3-210ENST00000568416 STXBP3O00186 592 aa21.66■■□□□ 1.06
SPSB3-210ENST00000568416 CDC27P30260 824 aa21.66■■□□□ 1.06
SPSB3-210ENST00000568416 ARHGAP4P98171 946 aa21.66■■□□□ 1.06
SPSB3-210ENST00000568416 MICALL1Q8N3F8 863 aa21.66■■□□□ 1.06
SPSB3-210ENST00000568416 ZNF713Q8N859 430 aaPredicted RBP21.66■■□□□ 1.06
SPSB3-210ENST00000568416 OSBPL7Q9BZF2 842 aa21.66■■□□□ 1.06
SPSB3-210ENST00000568416 GTPBP6O43824 516 aaPredicted RBP21.65■■□□□ 1.06
SPSB3-210ENST00000568416 CTSHP09668 335 aa21.65■■□□□ 1.06
SPSB3-210ENST00000568416 FAM26DQ5JW98 314 aa21.65■■□□□ 1.06
SPSB3-210ENST00000568416 ASB2Q96Q27 587 aa21.65■■□□□ 1.06
SPSB3-210ENST00000568416 MXRA8Q9BRK3 442 aa21.65■■□□□ 1.06
SPSB3-210ENST00000568416 BARHL2Q9NY43 387 aa21.65■■□□□ 1.06
SPSB3-210ENST00000568416 PKD2L1Q9P0L9 805 aa21.65■■□□□ 1.06
SPSB3-210ENST00000568416 DOCK5Q9H7D0 1870 aa21.64■■□□□ 1.06
SPSB3-210ENST00000568416 FOSP01100 380 aaPredicted RBP21.64■■□□□ 1.05
SPSB3-210ENST00000568416 CPA1P15085 419 aa21.64■■□□□ 1.05
SPSB3-210ENST00000568416 HSPA4P34932 840 aa21.64■■□□□ 1.05
SPSB3-210ENST00000568416 ADCY7P51828 1080 aa21.64■■□□□ 1.05
SPSB3-210ENST00000568416 MRPS5P82675 430 aaKnown RBP21.64■■□□□ 1.05
SPSB3-210ENST00000568416 GRB10Q13322 594 aa21.64■■□□□ 1.05
SPSB3-210ENST00000568416 SEPT8Q92599 483 aa21.64■■□□□ 1.05
SPSB3-210ENST00000568416 PGBD1Q96JS3 809 aa21.64■■□□□ 1.05
SPSB3-210ENST00000568416 ERAP1Q9NZ08 941 aa21.64■■□□□ 1.05
SPSB3-210ENST00000568416 A0A0C4DFX4 3053 aa21.64■■□□□ 1.05
SPSB3-210ENST00000568416 SMCO2A6NFE2 343 aa21.63■■□□□ 1.05
SPSB3-210ENST00000568416 LPXNO60711 386 aa21.63■■□□□ 1.05
SPSB3-210ENST00000568416 AMHP03971 560 aa21.63■■□□□ 1.05
SPSB3-210ENST00000568416 CLK2P49760 499 aaKnown RBP21.63■■□□□ 1.05
SPSB3-210ENST00000568416 KRT40Q6A162 431 aa21.63■■□□□ 1.05
SPSB3-210ENST00000568416 FAM117BQ6P1L5 589 aa21.63■■□□□ 1.05
SPSB3-210ENST00000568416 RPAINQ86UA6 219 aa21.63■■□□□ 1.05
SPSB3-210ENST00000568416 CYP2W1Q8TAV3 490 aa21.63■■□□□ 1.05
SPSB3-210ENST00000568416 ANO3Q9BYT9 981 aa21.63■■□□□ 1.05
SPSB3-210ENST00000568416 TSPYL2Q9H2G4 693 aaPredicted RBP21.63■■□□□ 1.05
SPSB3-210ENST00000568416 KCNH7Q9NS40 1196 aa21.63■■□□□ 1.05
SPSB3-210ENST00000568416 SNX14Q9Y5W7 946 aa21.63■■□□□ 1.05
SPSB3-210ENST00000568416 LINC01553A4QN01 128 aa21.62■■□□□ 1.05
SPSB3-210ENST00000568416 ADD1P35611 737 aaKnown RBP21.62■■□□□ 1.05
SPSB3-210ENST00000568416 ERVK-21P61565 698 aa21.62■■□□□ 1.05
SPSB3-210ENST00000568416 HTRA4P83105 476 aaPredicted RBP21.62■■□□□ 1.05
SPSB3-210ENST00000568416 PPFIA1Q13136 1202 aa21.62■■□□□ 1.05
SPSB3-210ENST00000568416 AP3B2Q13367 1082 aa21.62■■□□□ 1.05
SPSB3-210ENST00000568416 RUFY4Q6ZNE9 571 aa21.62■■□□□ 1.05
SPSB3-210ENST00000568416 GLG1Q92896 1179 aa21.62■■□□□ 1.05
SPSB3-210ENST00000568416 CCDC136Q96JN2 1154 aa21.62■■□□□ 1.05
SPSB3-210ENST00000568416 JAKMIP1Q96N16 626 aaKnown RBP21.62■■□□□ 1.05
SPSB3-210ENST00000568416 PCYT2Q99447 389 aa21.62■■□□□ 1.05
SPSB3-210ENST00000568416 SMARCAD1Q9H4L7 1026 aa21.62■■□□□ 1.05
SPSB3-210ENST00000568416 JPH1Q9HDC5 661 aaPredicted RBP21.62■■□□□ 1.05
SPSB3-210ENST00000568416 TMEM260Q9NX78 707 aa21.62■■□□□ 1.05
SPSB3-210ENST00000568416 INSL6Q9Y581 213 aa21.62■■□□□ 1.05
SPSB3-210ENST00000568416 NFASCO94856 1347 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 ARP10275 920 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 MARK3P27448 753 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 SREBF1P36956 1147 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 METAP2P50579 478 aaKnown RBP eCLIP21.61■■□□□ 1.05
SPSB3-210ENST00000568416 APOBRQ0VD83 1088 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 GRIK4Q16099 956 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 PFKFB3Q16875 520 aaPredicted RBP21.61■■□□□ 1.05
SPSB3-210ENST00000568416 CEP55Q53EZ4 464 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 TAF2Q6P1X5 1199 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 Q6ZUG5 572 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 MYOCDQ8IZQ8 938 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 TGS1Q96RS0 853 aaKnown RBP21.61■■□□□ 1.05
SPSB3-210ENST00000568416 GLT8D2Q9H1C3 349 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 SLC9A2Q9UBY0 812 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 CHD7Q9P2D1 2997 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 NID2Q14112 1375 aa21.61■■□□□ 1.05
SPSB3-210ENST00000568416 PRUNE2Q8WUY3 3088 aa21.6■■□□□ 1.05
SPSB3-210ENST00000568416 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.6■■□□□ 1.05
SPSB3-210ENST00000568416 MBLAC1A4D2B0 266 aaPredicted RBP21.6■■□□□ 1.05
SPSB3-210ENST00000568416 CHRNA1P02708 482 aa21.6■■□□□ 1.05
SPSB3-210ENST00000568416 FGD1P98174 961 aa21.6■■□□□ 1.05
SPSB3-210ENST00000568416 MGAT3Q09327 533 aa21.6■■□□□ 1.05
SPSB3-210ENST00000568416 MARCH8Q5T0T0 291 aa21.6■■□□□ 1.05
SPSB3-210ENST00000568416 BLOC1S2Q6QNY1 142 aa21.6■■□□□ 1.05
SPSB3-210ENST00000568416 FBXL16Q8N461 479 aa21.6■■□□□ 1.05
SPSB3-210ENST00000568416 SP7Q8TDD2 431 aaPredicted RBP21.6■■□□□ 1.05
SPSB3-210ENST00000568416 GDPD5Q8WTR4 605 aa21.6■■□□□ 1.05
SPSB3-210ENST00000568416 APBB2Q92870 758 aa21.6■■□□□ 1.05
SPSB3-210ENST00000568416 BRF1Q92994 677 aa21.6■■□□□ 1.05
SPSB3-210ENST00000568416 TOP1MTQ969P6 601 aa21.6■■□□□ 1.05
SPSB3-210ENST00000568416 AGO4Q9HCK5 861 aaKnown RBP21.6■■□□□ 1.05
SPSB3-210ENST00000568416 LMCD1Q9NZU5 365 aa21.6■■□□□ 1.05
SPSB3-210ENST00000568416 NAP1L2Q9ULW6 460 aaPredicted RBP21.6■■□□□ 1.05
SPSB3-210ENST00000568416 CCDC196A0A1B0GTZ2 297 aa21.59■■□□□ 1.05
SPSB3-210ENST00000568416 MEIS1O00470 390 aa21.59■■□□□ 1.05
SPSB3-210ENST00000568416 ITGB3BPQ13352 177 aaPredicted RBP21.59■■□□□ 1.05
SPSB3-210ENST00000568416 SDF4Q9BRK5 362 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms