RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 RLFQ13129 1914 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 BICDL2A1A5D9 508 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 TEX33O43247 280 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 SORBS3O60504 671 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 SKILP12757 684 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 SLC12A3P55017 1021 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 SP4Q02446 784 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 FAM26FQ5R3K3 315 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 CDKAL1Q5VV42 579 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 VSTM4Q8IW00 320 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 NELFCDQ8IXH7 590 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 NSUN6Q8TEA1 469 aaKnown RBP7.86□□□□□ -1.15
SMG1-215ENST00000568239 SLC10A4Q96EP9 437 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 CYP39A1Q9NYL5 469 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 OTOFQ9HC10 1997 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 SPDYE5A6NIY4 337 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 ERCC3P19447 782 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 CCNE1P24864 410 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 CCND2P30279 289 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 SPAG1Q07617 926 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 KRT31Q15323 416 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 TCP11X2Q5H9J9 407 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 SAMD3Q8N6K7 520 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 SYT2Q8N9I0 419 aaPredicted RBP7.86□□□□□ -1.15
SMG1-215ENST00000568239 ZNF526Q8TF50 670 aaPredicted RBP7.86□□□□□ -1.15
SMG1-215ENST00000568239 CPLX3Q8WVH0 158 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 RIT2Q99578 217 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 HSD17B14Q9BPX1 270 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 LXNQ9BS40 222 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 POLR3CQ9BUI4 534 aaPredicted RBP7.86□□□□□ -1.15
SMG1-215ENST00000568239 AGO4Q9HCK5 861 aaKnown RBP7.86□□□□□ -1.15
SMG1-215ENST00000568239 BTBD7Q9P203 1132 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 UBIAD1Q9Y5Z9 338 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 PTPRFP10586 1907 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 ZC3H4Q9UPT8 1303 aaKnown RBP7.85□□□□□ -1.15
SMG1-215ENST00000568239 A0A0G2JLL6 359 aaPredicted RBP7.85□□□□□ -1.15
SMG1-215ENST00000568239 SFI1A8K8P3 1242 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 CXCL11O14625 94 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 ZNF500O60304 480 aaPredicted RBP7.85□□□□□ -1.15
SMG1-215ENST00000568239 ATP9AO75110 1047 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 SEMA3FQ13275 785 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 ITGB3BPQ13352 177 aaPredicted RBP7.85□□□□□ -1.15
SMG1-215ENST00000568239 NOLC1Q14978 699 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMG1-215ENST00000568239 ARSHQ5FYA8 562 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 SPECC1LQ69YQ0 1117 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 LBX2Q6XYB7 198 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 MAEAQ7L5Y9 396 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 PRRT2Q7Z6L0 340 aaPredicted RBP7.85□□□□□ -1.15
SMG1-215ENST00000568239 PROCA1Q8NCQ7 364 aaPredicted RBP7.85□□□□□ -1.15
SMG1-215ENST00000568239 REEP2Q9BRK0 252 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 GTPBP4Q9BZE4 634 aaKnown RBP7.85□□□□□ -1.15
SMG1-215ENST00000568239 ASCC2Q9H1I8 757 aaPredicted RBP7.85□□□□□ -1.15
SMG1-215ENST00000568239 RRAGCQ9HB90 399 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 TUFT1Q9NNX1 390 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 MYPNQ86TC9 1320 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 A0A1B0GTH6 734 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 ATP2A1O14983 1001 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 NRDCO43847 1150 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 TBCAO75347 108 aaKnown RBP7.85□□□□□ -1.15
SMG1-215ENST00000568239 EYA4O95677 639 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 BCRP11274 1271 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 PPP1R2P41236 205 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 GHRHRQ02643 423 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 PSMD2Q13200 908 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 NR1I3Q14994 352 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 EPHA7Q15375 998 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 TTI2Q6NXR4 508 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 ARMCX5Q6P1M9 558 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 MYOCDQ8IZQ8 938 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 CCDC150Q8NCX0 1101 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 KIAA1524Q8TCG1 905 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 CCDC43Q96MW1 224 aaKnown RBP7.85□□□□□ -1.15
SMG1-215ENST00000568239 NACC1Q96RE7 527 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 SH2D3AQ9BRG2 576 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 RUSC1Q9BVN2 902 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 SEMA6BQ9H3T3 888 aa7.85□□□□□ -1.15
SMG1-215ENST00000568239 WRAP73Q9P2S5 460 aaPredicted RBP7.85□□□□□ -1.15
SMG1-215ENST00000568239 ADD3Q9UEY8 706 aaKnown RBP7.85□□□□□ -1.15
SMG1-215ENST00000568239 WDR90Q96KV7 1748 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 RSPH10B2B2RC85 870 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 SLC26A4O43511 780 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 RSPH10BP0C881 870 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 MTIF2P46199 727 aaKnown RBP7.84□□□□□ -1.15
SMG1-215ENST00000568239 COPB1P53618 953 aaKnown RBP7.84□□□□□ -1.15
SMG1-215ENST00000568239 HERVK_113P62684 666 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 CNTN2Q02246 1040 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 UBXN1Q04323 297 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 PPIL2Q13356 520 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 GIT2Q14161 759 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 NLRX1Q86UT6 975 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 VSIG10LQ86VR7 867 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 DUSP9Q99956 384 aaKnown RBP7.84□□□□□ -1.15
SMG1-215ENST00000568239 FGFBP2Q9BYJ0 223 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 SPATC1LQ9H0A9 340 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 TBC1D22BQ9NU19 505 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 AGTPBP1Q9UPW5 1226 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 SCN4AP35499 1836 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 PCNTO95613 3336 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 ARHGEF35A5YM69 484 aa7.84□□□□□ -1.15
SMG1-215ENST00000568239 DHX15O43143 795 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms