RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 UBAC1Q9BSL1 405 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 DBNDD1Q9H9R9 158 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 MKNK2Q9HBH9 465 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 ZNF287Q9HBT7 754 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 KCNQ5Q9NR82 932 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 USP40Q9NVE5 1235 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 ARPP21Q9UBL0 812 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-218ENST00000568153 SLC12A7Q9Y666 1083 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 TACC3Q9Y6A5 838 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 COL1A1P02452 1464 aaPredicted RBP7.15□□□□□ -1.27
CAPN3-218ENST00000568153 CYP2D7A0A087X1C5 515 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 CPLX1O14810 134 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 GAKO14976 1311 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 ZBTB43O43298 467 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 PPIP5K2O43314 1243 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 ORC4O43929 436 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 BMP6P22004 513 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 NME2P22392 152 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 NEDD4P46934 1319 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 ST13P50502 369 aaKnown RBP7.14□□□□□ -1.27
CAPN3-218ENST00000568153 ST3GAL1Q11201 340 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 WTAPQ15007 396 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 CCDC85BQ15834 202 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-218ENST00000568153 AOC3Q16853 763 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 LDLRAD1Q5T700 205 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 RASIP1Q5U651 963 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 MCTP1Q6DN14 999 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 SV2BQ7L1I2 683 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 SGMS1Q86VZ5 419 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 IQCA1Q86XH1 822 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 MAPKAPK5Q8IW41 473 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 CERS5Q8N5B7 392 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 SMARCC2Q8TAQ2 1214 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 TEKT1Q969V4 418 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 DDX11Q96FC9 970 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 RUSC1Q9BVN2 902 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 MXD3Q9BW11 206 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 TMPRSS13Q9BYE2 586 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 LY9Q9HBG7 655 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 PPP1R1BQ9UD71 204 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-218ENST00000568153 DAGLAQ9Y4D2 1042 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 CD2APQ9Y5K6 639 aa7.14□□□□□ -1.27
CAPN3-218ENST00000568153 AKAP11Q9UKA4 1901 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 TNRC6CQ9HCJ0 1690 aaKnown RBP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 CCDC196A0A1B0GTZ2 297 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 VPS37CA5D8V6 355 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 MEGF11A6BM72 1044 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 GOLGA8BA8MQT2 603 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 H3BQV1 296 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 CDKL5O76039 1030 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 CTDNEP1O95476 244 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 GSTP1P09211 210 aaKnown RBP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 CYP2D6P10635 497 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 GLB1P16278 677 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 NCLP19338 710 aaKnown RBP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 METAP2P50579 478 aaKnown RBP eCLIP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 RBM5P52756 815 aaKnown RBP eCLIP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 RHBDL3P58872 404 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 TFAP4Q01664 338 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 PPP2R5BQ15173 497 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 PRSS36Q5K4E3 855 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 EXOSC6Q5RKV6 272 aaKnown RBP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 DACT2Q5SW24 774 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 TTC6Q86TZ1 520 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 NSUN7Q8NE18 718 aaKnown RBP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 MRRFQ96E11 262 aaKnown RBP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 ZDHHC15Q96MV8 337 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 UBL7Q96S82 380 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 RNF208Q9H0X6 261 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 NCOA5Q9HCD5 579 aaKnown RBP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 KIAA1522Q9P206 1035 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 SAP30BPQ9UHR5 308 aaKnown RBP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 MTMR6Q9Y217 621 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.13□□□□□ -1.27
CAPN3-218ENST00000568153 AK9Q5TCS8 1911 aa7.13□□□□□ -1.27
CAPN3-218ENST00000568153 PTPDC1A2A3K4 754 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 TSPY2A6NKD2 308 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 GOLGA8AA7E2F4 631 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 JAK2O60674 1132 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 PRDM1O75626 825 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 F13A1P00488 732 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 VIL1P09327 827 aaKnown RBP7.12□□□□□ -1.27
CAPN3-218ENST00000568153 CALM1P0DP23 149 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 CALM2P0DP24 149 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 CALM3P0DP25 149 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 ARNTP27540 789 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 CRKP46108 304 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 CDK8P49336 464 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 PLCD1P51178 756 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 RCAN1P53805 252 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 SSRP1Q08945 709 aaKnown RBP7.12□□□□□ -1.27
CAPN3-218ENST00000568153 ZNF252P-AS1Q0IIN9 211 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 FAM47AQ5JRC9 791 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 IFIT1BQ5T764 474 aaKnown RBP7.12□□□□□ -1.27
CAPN3-218ENST00000568153 PCNX4Q63HM2 1172 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 APOBEC3HQ6NTF7 200 aaKnown RBP7.12□□□□□ -1.27
CAPN3-218ENST00000568153 CDC42EP5Q6NZY7 148 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 APOA5Q6Q788 366 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 PRR23CQ6ZRP0 262 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 CATIPQ7Z7H3 387 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms