RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 TCEAL9Q9UHQ7 104 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 H3BQV1 296 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 H3BRB1 525 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 DHX15O43143 795 aaKnown RBP14.41□□□□□ -0.1
GINS3-209ENST00000567909 SLC37A4O43826 429 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 FAAP100Q0VG06 881 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 Q4G0T1 1027 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 MCTP1Q6DN14 999 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 NFRKBQ6P4R8 1299 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 MOXD1Q6UVY6 613 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 HSCBQ8IWL3 235 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 C7orf31Q8N865 590 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 GLG1Q92896 1179 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 SEZ6LQ9BYH1 1024 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 TUT1Q9H6E5 874 aaKnown RBP14.41□□□□□ -0.1
GINS3-209ENST00000567909 TBC1D22BQ9NU19 505 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 ZNF215Q9UL58 517 aaPredicted RBP14.41□□□□□ -0.1
GINS3-209ENST00000567909 LTBP2Q14767 1821 aa14.41□□□□□ -0.1
GINS3-209ENST00000567909 HAS3O00219 553 aa14.4□□□□□ -0.1
GINS3-209ENST00000567909 B4GALT4O60513 344 aa14.4□□□□□ -0.1
GINS3-209ENST00000567909 GAS7O60861 476 aa14.4□□□□□ -0.1
GINS3-209ENST00000567909 CCNE2O96020 404 aa14.4□□□□□ -0.1
GINS3-209ENST00000567909 GCFC2P16383 781 aaKnown RBP14.4□□□□□ -0.1
GINS3-209ENST00000567909 MARK3P27448 753 aa14.4□□□□□ -0.1
GINS3-209ENST00000567909 PRPF38BQ5VTL8 546 aaKnown RBP14.4□□□□□ -0.1
GINS3-209ENST00000567909 LRCH2Q5VUJ6 765 aa14.4□□□□□ -0.1
GINS3-209ENST00000567909 LARP1BQ659C4 914 aaKnown RBP14.4□□□□□ -0.1
GINS3-209ENST00000567909 PPP4R3AQ6IN85 833 aa14.4□□□□□ -0.1
GINS3-209ENST00000567909 SNX21Q969T3 373 aa14.4□□□□□ -0.1
GINS3-209ENST00000567909 MBOAT7Q96N66 472 aa14.4□□□□□ -0.1
GINS3-209ENST00000567909 NAP1L4Q99733 375 aaKnown RBP14.4□□□□□ -0.1
GINS3-209ENST00000567909 FOXP1Q9H334 677 aaPredicted RBP14.4□□□□□ -0.1
GINS3-209ENST00000567909 TRMT13Q9NUP7 481 aaKnown RBP14.4□□□□□ -0.1
GINS3-209ENST00000567909 HDAC6Q9UBN7 1215 aa14.4□□□□□ -0.1
GINS3-209ENST00000567909 TRIM43BA6NCK2 446 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 KIF28PB7ZC32 967 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 CHMP2AO43633 222 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 MARCH6O60337 910 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 CD4P01730 458 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 KRT76Q01546 638 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 PTPN11Q06124 597 aaPredicted RBP14.39□□□□□ -0.11
GINS3-209ENST00000567909 NOSTRINQ8IVI9 506 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 ETNPPLQ8TBG4 499 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 SLC5A5Q92911 643 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 TRIM43Q96BQ3 446 aaPredicted RBP14.39□□□□□ -0.11
GINS3-209ENST00000567909 TEKT3Q9BXF9 490 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 SMARCAD1Q9H4L7 1026 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 AZI2Q9H6S1 392 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 NOD1Q9Y239 953 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 SAMM50Q9Y512 469 aa14.39□□□□□ -0.11
GINS3-209ENST00000567909 WNT7AO00755 349 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 BACH1O14867 736 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 KIAA0355O15063 1070 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 SUPT20HL2P0C7V6 817 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 SMIM10L2AP0DMW4 78 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 SMIM10L2BP0DMW5 78 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 CYP2C9P11712 490 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 RAG1P15918 1043 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 MDM2Q00987 491 aaPredicted RBP14.38□□□□□ -0.11
GINS3-209ENST00000567909 GDF6Q6KF10 455 aaPredicted RBP14.38□□□□□ -0.11
GINS3-209ENST00000567909 ZNF746Q6NUN9 644 aaPredicted RBP14.38□□□□□ -0.11
GINS3-209ENST00000567909 MIS18BP1Q6P0N0 1132 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 POTEDQ86YR6 584 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 PCYT2Q99447 389 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 RIT2Q99578 217 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 LBHD1Q9BQE6 289 aaPredicted RBP14.38□□□□□ -0.11
GINS3-209ENST00000567909 PPP1R12CQ9BZL4 782 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 ERAP1Q9NZ08 941 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 TBX21Q9UL17 535 aa14.38□□□□□ -0.11
GINS3-209ENST00000567909 WDR64B1ANS9 1081 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 LGR5O75473 907 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 PSMD10O75832 226 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 HSP90AA1P07900 732 aaKnown RBP14.37□□□□□ -0.11
GINS3-209ENST00000567909 MCM7P33993 719 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 MAGEA10P43363 369 aaPredicted RBP14.37□□□□□ -0.11
GINS3-209ENST00000567909 STAT5BP51692 787 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 ZNF200P98182 395 aaPredicted RBP14.37□□□□□ -0.11
GINS3-209ENST00000567909 PTGISQ16647 500 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 FAM160B1Q5W0V3 765 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 ABHD15Q6UXT9 468 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 SESTD1Q86VW0 696 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 SMAP1Q8IYB5 467 aaPredicted RBP14.37□□□□□ -0.11
GINS3-209ENST00000567909 BADQ92934 168 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 INTS4Q96HW7 963 aaKnown RBP14.37□□□□□ -0.11
GINS3-209ENST00000567909 UNC45AQ9H3U1 944 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 HIPK3Q9H422 1215 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 RNPEPQ9H4A4 650 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 GTF2IRD1Q9UHL9 959 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 NOL7Q9UMY1 257 aaKnown RBP14.37□□□□□ -0.11
GINS3-209ENST00000567909 EMSYQ7Z589 1322 aa14.37□□□□□ -0.11
GINS3-209ENST00000567909 C17orf102A2RUQ5 167 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 VPS37CA5D8V6 355 aaPredicted RBP14.36□□□□□ -0.11
GINS3-209ENST00000567909 NEMFO60524 1076 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 ATG7O95352 703 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 BAG4O95429 457 aaKnown RBP14.36□□□□□ -0.11
GINS3-209ENST00000567909 PSAPP07602 524 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 ITGB8P26012 769 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 U2AF2P26368 475 aaKnown RBP eCLIP14.36□□□□□ -0.11
GINS3-209ENST00000567909 ZNF174Q15697 407 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 CALCRLQ16602 461 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms