RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 HMMRO75330 724 aa16.15■□□□□ 0.18
SMG1-213ENST00000567737 EIF3JO75822 258 aaKnown RBP16.15■□□□□ 0.18
SMG1-213ENST00000567737 SP100P23497 879 aaPredicted RBP16.15■□□□□ 0.18
SMG1-213ENST00000567737 ARHGEF16Q5VV41 709 aa16.15■□□□□ 0.18
SMG1-213ENST00000567737 EFCAB3Q8N7B9 438 aa16.15■□□□□ 0.18
SMG1-213ENST00000567737 KBTBD3Q8NAB2 608 aa16.15■□□□□ 0.18
SMG1-213ENST00000567737 KLHL23Q8NBE8 558 aa16.15■□□□□ 0.18
SMG1-213ENST00000567737 KCNG4Q8TDN1 519 aa16.15■□□□□ 0.18
SMG1-213ENST00000567737 SYTL5Q8TDW5 730 aaPredicted RBP16.15■□□□□ 0.18
SMG1-213ENST00000567737 MICAL1Q8TDZ2 1067 aa16.15■□□□□ 0.18
SMG1-213ENST00000567737 RMDN3Q96TC7 470 aa16.15■□□□□ 0.18
SMG1-213ENST00000567737 MAF1Q9H063 256 aa16.15■□□□□ 0.18
SMG1-213ENST00000567737 PCDHGC5Q9Y5F6 944 aa16.15■□□□□ 0.18
SMG1-213ENST00000567737 MRPL42Q9Y6G3 142 aaKnown RBP16.15■□□□□ 0.18
SMG1-213ENST00000567737 GVINP1Q7Z2Y8 2422 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 ATMINO43313 823 aaPredicted RBP16.14■□□□□ 0.17
SMG1-213ENST00000567737 RANBP6O60518 1105 aaKnown RBP16.14■□□□□ 0.17
SMG1-213ENST00000567737 DGKIO75912 1065 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 ZFYP08048 801 aaPredicted RBP16.14■□□□□ 0.17
SMG1-213ENST00000567737 SRGAP2BP0DMP2 458 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 SMIM10L2AP0DMW4 78 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 SMIM10L2BP0DMW5 78 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 GNAT1P11488 350 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 RLBP1P12271 317 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 HOXC8P31273 242 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 NOVP48745 357 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 HSDL1Q3SXM5 330 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 ATP8B4Q8TF62 1192 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 C16orf70Q9BSU1 422 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 RYDENQ9NUL5 291 aaKnown RBP16.14■□□□□ 0.17
SMG1-213ENST00000567737 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.14■□□□□ 0.17
SMG1-213ENST00000567737 NR2E1Q9Y466 385 aa16.14■□□□□ 0.17
SMG1-213ENST00000567737 H3BRB1 525 aa16.13■□□□□ 0.17
SMG1-213ENST00000567737 PER2O15055 1255 aa16.13■□□□□ 0.17
SMG1-213ENST00000567737 SORBS3O60504 671 aa16.13■□□□□ 0.17
SMG1-213ENST00000567737 BRD1O95696 1058 aa16.13■□□□□ 0.17
SMG1-213ENST00000567737 CLCN5P51795 746 aa16.13■□□□□ 0.17
SMG1-213ENST00000567737 FAM26DQ5JW98 314 aa16.13■□□□□ 0.17
SMG1-213ENST00000567737 MYSM1Q5VVJ2 828 aa16.13■□□□□ 0.17
SMG1-213ENST00000567737 KIAA2013Q8IYS2 634 aa16.13■□□□□ 0.17
SMG1-213ENST00000567737 CMTR2Q8IYT2 770 aaKnown RBP16.13■□□□□ 0.17
SMG1-213ENST00000567737 CDCA3Q99618 268 aaPredicted RBP16.13■□□□□ 0.17
SMG1-213ENST00000567737 RNPEPQ9H4A4 650 aa16.13■□□□□ 0.17
SMG1-213ENST00000567737 TUT1Q9H6E5 874 aaKnown RBP16.13■□□□□ 0.17
SMG1-213ENST00000567737 TSHZ2Q9NRE2 1034 aa16.13■□□□□ 0.17
SMG1-213ENST00000567737 COL20A1Q9P218 1284 aa16.13■□□□□ 0.17
SMG1-213ENST00000567737 DMDP11532 3685 aa16.12■□□□□ 0.17
SMG1-213ENST00000567737 KIAA1217Q5T5P2 1943 aa16.12■□□□□ 0.17
SMG1-213ENST00000567737 ENPP3O14638 875 aa16.12■□□□□ 0.17
SMG1-213ENST00000567737 GGPS1O95749 300 aa16.12■□□□□ 0.17
SMG1-213ENST00000567737 GHRP10912 638 aa16.12■□□□□ 0.17
SMG1-213ENST00000567737 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
SMG1-213ENST00000567737 EIF2AK2P19525 551 aaKnown RBP16.12■□□□□ 0.17
SMG1-213ENST00000567737 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
SMG1-213ENST00000567737 CELF3Q5SZQ8 465 aaKnown RBP16.12■□□□□ 0.17
SMG1-213ENST00000567737 KCNV1Q6PIU1 500 aa16.12■□□□□ 0.17
SMG1-213ENST00000567737 MCF2L2Q86YR7 1114 aa16.12■□□□□ 0.17
SMG1-213ENST00000567737 TBC1D5Q92609 795 aa16.12■□□□□ 0.17
SMG1-213ENST00000567737 DCBLD2Q96PD2 775 aa16.12■□□□□ 0.17
SMG1-213ENST00000567737 LMNAP02545 664 aaKnown RBP16.11■□□□□ 0.17
SMG1-213ENST00000567737 NR3C2P08235 984 aa16.11■□□□□ 0.17
SMG1-213ENST00000567737 PDHBP11177 359 aa16.11■□□□□ 0.17
SMG1-213ENST00000567737 CTDSPL2Q05D32 466 aa16.11■□□□□ 0.17
SMG1-213ENST00000567737 DUSP6Q16828 381 aa16.11■□□□□ 0.17
SMG1-213ENST00000567737 TMEM47Q9BQJ4 181 aa16.11■□□□□ 0.17
SMG1-213ENST00000567737 SEMA4AQ9H3S1 761 aa16.11■□□□□ 0.17
SMG1-213ENST00000567737 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
SMG1-213ENST00000567737 ABCB11O95342 1321 aa16.11■□□□□ 0.17
SMG1-213ENST00000567737 CCDC171Q6TFL3 1326 aa16.11■□□□□ 0.17
SMG1-213ENST00000567737 PPFIA3O75145 1194 aa16.1■□□□□ 0.17
SMG1-213ENST00000567737 TECP42680 631 aa16.1■□□□□ 0.17
SMG1-213ENST00000567737 ZNF543Q08ER8 600 aa16.1■□□□□ 0.17
SMG1-213ENST00000567737 ANGPT1Q15389 498 aa16.1■□□□□ 0.17
SMG1-213ENST00000567737 ANKRD54Q6NXT1 300 aa16.1■□□□□ 0.17
SMG1-213ENST00000567737 VN1R2Q8NFZ6 395 aa16.1■□□□□ 0.17
SMG1-213ENST00000567737 APOL5Q9BWW9 433 aa16.1■□□□□ 0.17
SMG1-213ENST00000567737 S1PR5Q9H228 398 aa16.1■□□□□ 0.17
SMG1-213ENST00000567737 SETD4Q9NVD3 440 aa16.1■□□□□ 0.17
SMG1-213ENST00000567737 DMXL1Q9Y485 3027 aa16.1■□□□□ 0.17
SMG1-213ENST00000567737 CHRNA1P02708 482 aa16.09■□□□□ 0.17
SMG1-213ENST00000567737 LGALS2P05162 132 aa16.09■□□□□ 0.17
SMG1-213ENST00000567737 UBE3AQ05086 875 aa16.09■□□□□ 0.17
SMG1-213ENST00000567737 PAN2Q504Q3 1202 aaKnown RBP16.09■□□□□ 0.17
SMG1-213ENST00000567737 FLCNQ8NFG4 579 aa16.09■□□□□ 0.17
SMG1-213ENST00000567737 HINFPQ9BQA5 517 aa16.09■□□□□ 0.17
SMG1-213ENST00000567737 EHMT1Q9H9B1 1298 aa16.09■□□□□ 0.17
SMG1-213ENST00000567737 PXMP2Q9NR77 195 aa16.09■□□□□ 0.17
SMG1-213ENST00000567737 ECHDC1Q9NTX5 307 aa16.09■□□□□ 0.17
SMG1-213ENST00000567737 EPG5Q9HCE0 2579 aa16.08■□□□□ 0.17
SMG1-213ENST00000567737 KMT2BQ9UMN6 2715 aaPredicted RBP16.08■□□□□ 0.16
SMG1-213ENST00000567737 NOP56O00567 594 aaKnown RBP16.08■□□□□ 0.16
SMG1-213ENST00000567737 ARHGAP4P98171 946 aa16.08■□□□□ 0.16
SMG1-213ENST00000567737 LPIN1Q14693 890 aa16.08■□□□□ 0.16
SMG1-213ENST00000567737 TMEM184AQ6ZMB5 413 aa16.08■□□□□ 0.16
SMG1-213ENST00000567737 NPAS4Q8IUM7 802 aa16.08■□□□□ 0.16
SMG1-213ENST00000567737 CCDC105Q8IYK2 499 aa16.08■□□□□ 0.16
SMG1-213ENST00000567737 MFRPQ9BY79 579 aa16.08■□□□□ 0.16
SMG1-213ENST00000567737 SMOC2Q9H3U7 446 aa16.08■□□□□ 0.16
SMG1-213ENST00000567737 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
SMG1-213ENST00000567737 DLL3Q9NYJ7 618 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms