RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 INTS4Q96HW7 963 aaKnown RBP19.51■□□□□ 0.71
COMMD4-220ENST00000567720 EMSYQ7Z589 1322 aa19.51■□□□□ 0.71
COMMD4-220ENST00000567720 CCNT1O60563 726 aaKnown RBP19.5■□□□□ 0.71
COMMD4-220ENST00000567720 NOSTRINQ8IVI9 506 aa19.5■□□□□ 0.71
COMMD4-220ENST00000567720 KATNAL1Q9BW62 490 aa19.5■□□□□ 0.71
COMMD4-220ENST00000567720 KCNMB3Q9NPA1 279 aa19.5■□□□□ 0.71
COMMD4-220ENST00000567720 FOXD4L1Q9NU39 408 aa19.5■□□□□ 0.71
COMMD4-220ENST00000567720 ZMYND8Q9ULU4 1186 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-220ENST00000567720 SCN5AQ14524 2016 aa19.5■□□□□ 0.71
COMMD4-220ENST00000567720 B4GALT4O60513 344 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 CD4P01730 458 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 CLTBP09497 229 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 SYN1P17600 705 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 U2AF2P26368 475 aaKnown RBP eCLIP19.49■□□□□ 0.71
COMMD4-220ENST00000567720 CHMP4BP1P59074 171 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 FAAP100Q0VG06 881 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 KIAA0753Q2KHM9 967 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 FAM47CQ5HY64 1035 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 UTP14CQ5TAP6 766 aaKnown RBP19.49■□□□□ 0.71
COMMD4-220ENST00000567720 NFRKBQ6P4R8 1299 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 SH3RF1Q7Z6J0 888 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 SEPT1Q8WYJ6 367 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 TOX2Q96NM4 488 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 PCYT2Q99447 389 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 TBC1D22BQ9NU19 505 aa19.49■□□□□ 0.71
COMMD4-220ENST00000567720 H0YGN5 161 aa19.48■□□□□ 0.71
COMMD4-220ENST00000567720 H3BRB1 525 aa19.48■□□□□ 0.71
COMMD4-220ENST00000567720 LGR5O75473 907 aa19.48■□□□□ 0.71
COMMD4-220ENST00000567720 PSMD10O75832 226 aa19.48■□□□□ 0.71
COMMD4-220ENST00000567720 GNL2Q13823 731 aaKnown RBP19.48■□□□□ 0.71
COMMD4-220ENST00000567720 LRCH2Q5VUJ6 765 aa19.48■□□□□ 0.71
COMMD4-220ENST00000567720 SESTD1Q86VW0 696 aa19.48■□□□□ 0.71
COMMD4-220ENST00000567720 NAP1L4Q99733 375 aaKnown RBP19.48■□□□□ 0.71
COMMD4-220ENST00000567720 TUT1Q9H6E5 874 aaKnown RBP19.48■□□□□ 0.71
COMMD4-220ENST00000567720 PRDM5Q9NQX1 630 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-220ENST00000567720 TRMT13Q9NUP7 481 aaKnown RBP19.48■□□□□ 0.71
COMMD4-220ENST00000567720 TBX21Q9UL17 535 aa19.48■□□□□ 0.71
COMMD4-220ENST00000567720 NR2E3Q9Y5X4 410 aa19.48■□□□□ 0.71
COMMD4-220ENST00000567720 H3BQV1 296 aa19.47■□□□□ 0.71
COMMD4-220ENST00000567720 GAS7O60861 476 aa19.47■□□□□ 0.71
COMMD4-220ENST00000567720 ATG7O95352 703 aa19.47■□□□□ 0.71
COMMD4-220ENST00000567720 KRT76Q01546 638 aa19.47■□□□□ 0.71
COMMD4-220ENST00000567720 LARP1BQ659C4 914 aaKnown RBP19.47■□□□□ 0.71
COMMD4-220ENST00000567720 ZNF746Q6NUN9 644 aaPredicted RBP19.47■□□□□ 0.71
COMMD4-220ENST00000567720 CCDC60Q8IWA6 550 aaPredicted RBP19.47■□□□□ 0.71
COMMD4-220ENST00000567720 RIT2Q99578 217 aa19.47■□□□□ 0.71
COMMD4-220ENST00000567720 SEZ6LQ9BYH1 1024 aa19.47■□□□□ 0.71
COMMD4-220ENST00000567720 TRPV6Q9H1D0 765 aa19.47■□□□□ 0.71
COMMD4-220ENST00000567720 UNC45AQ9H3U1 944 aa19.47■□□□□ 0.71
COMMD4-220ENST00000567720 GTF2IRD1Q9UHL9 959 aa19.47■□□□□ 0.71
COMMD4-220ENST00000567720 ZNF215Q9UL58 517 aaPredicted RBP19.47■□□□□ 0.71
COMMD4-220ENST00000567720 IGKV6D-21A0A0A0MT36 114 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 TRIM43BA6NCK2 446 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 DCDC2CA8MYV0 355 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 CHMP2AO43633 222 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 SUPT20HL2P0C7V6 817 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 MARK3P27448 753 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 PTPN11Q06124 597 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-220ENST00000567720 HIC1Q14526 733 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 NBR1Q14596 966 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 GDF6Q6KF10 455 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-220ENST00000567720 B3GNT9Q6UX72 402 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 ABHD15Q6UXT9 468 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 HAS1Q92839 578 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 TRIM43Q96BQ3 446 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-220ENST00000567720 CTAGE1Q96RT6 745 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 TEKT3Q9BXF9 490 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 HDAC6Q9UBN7 1215 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 VAV3Q9UKW4 847 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 IGSF9BQ9UPX0 1349 aa19.46■□□□□ 0.71
COMMD4-220ENST00000567720 TLR3O15455 904 aaKnown RBP19.45■□□□□ 0.7
COMMD4-220ENST00000567720 NEMFO60524 1076 aa19.45■□□□□ 0.7
COMMD4-220ENST00000567720 SMIM10L2AP0DMW4 78 aa19.45■□□□□ 0.7
COMMD4-220ENST00000567720 SMIM10L2BP0DMW5 78 aa19.45■□□□□ 0.7
COMMD4-220ENST00000567720 ATP2B1P20020 1258 aa19.45■□□□□ 0.7
COMMD4-220ENST00000567720 HOXC8P31273 242 aa19.45■□□□□ 0.7
COMMD4-220ENST00000567720 MCTP1Q6DN14 999 aa19.45■□□□□ 0.7
COMMD4-220ENST00000567720 SMAP1Q8IYB5 467 aaPredicted RBP19.45■□□□□ 0.7
COMMD4-220ENST00000567720 TCEAL9Q9UHQ7 104 aa19.45■□□□□ 0.7
COMMD4-220ENST00000567720 EVPLQ92817 2033 aa19.45■□□□□ 0.7
COMMD4-220ENST00000567720 LOXHD1Q8IVV2 1947 aa19.45■□□□□ 0.7
COMMD4-220ENST00000567720 VPS37CA5D8V6 355 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-220ENST00000567720 WDR64B1ANS9 1081 aa19.44■□□□□ 0.7
COMMD4-220ENST00000567720 KIAA0355O15063 1070 aa19.44■□□□□ 0.7
COMMD4-220ENST00000567720 TBX3O15119 743 aa19.44■□□□□ 0.7
COMMD4-220ENST00000567720 ITGB8P26012 769 aa19.44■□□□□ 0.7
COMMD4-220ENST00000567720 TOB1P50616 345 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-220ENST00000567720 TTC38Q5R3I4 469 aa19.44■□□□□ 0.7
COMMD4-220ENST00000567720 PRPF38BQ5VTL8 546 aaKnown RBP19.44■□□□□ 0.7
COMMD4-220ENST00000567720 C7orf31Q8N865 590 aa19.44■□□□□ 0.7
COMMD4-220ENST00000567720 GLG1Q92896 1179 aa19.44■□□□□ 0.7
COMMD4-220ENST00000567720 FAM20AQ96MK3 541 aa19.44■□□□□ 0.7
COMMD4-220ENST00000567720 TMEM60Q9H2L4 133 aa19.44■□□□□ 0.7
COMMD4-220ENST00000567720 RNPEPQ9H4A4 650 aa19.44■□□□□ 0.7
COMMD4-220ENST00000567720 SMARCAD1Q9H4L7 1026 aa19.44■□□□□ 0.7
COMMD4-220ENST00000567720 ERAP1Q9NZ08 941 aa19.44■□□□□ 0.7
COMMD4-220ENST00000567720 SYT1P21579 422 aa19.43■□□□□ 0.7
COMMD4-220ENST00000567720 MCM7P33993 719 aa19.43■□□□□ 0.7
COMMD4-220ENST00000567720 TRAPPC10P48553 1259 aa19.43■□□□□ 0.7
COMMD4-220ENST00000567720 SPIRE1Q08AE8 756 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms