RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 SKOR2Q2VWA4 1001 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 ZSCAN23Q3MJ62 389 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 KRT40Q6A162 431 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 RBBP6Q7Z6E9 1792 aaKnown RBP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 IQCA1Q86XH1 822 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 CRACR2BQ8N4Y2 399 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 SRBD1Q8N5C6 995 aaKnown RBP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 BEND7Q8N7W2 519 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 SUPT20HQ8NEM7 779 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 FBXO18Q8NFZ0 1043 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 NLGN2Q8NFZ4 835 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 LEO1Q8WVC0 666 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-210ENST00000567654 PLIN4Q96Q06 1357 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 GMLQ99445 158 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 PAPPA2Q9BXP8 1791 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 DNAJC25Q9H1X3 360 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 MKNK2Q9HBH9 465 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 KCNJ14Q9UNX9 436 aa6.63□□□□□ -1.35
SF3B3-210ENST00000567654 WDR81Q562E7 1941 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 CNTNAP1P78357 1384 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 ELP1O95163 1332 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 IGKV6D-41A0A0C4DH26 115 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 DHX16O60231 1041 aaKnown RBP6.62□□□□□ -1.35
SF3B3-210ENST00000567654 DDAH1O94760 285 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 MBD3O95983 291 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 SLC3A2P08195 630 aaKnown RBP6.62□□□□□ -1.35
SF3B3-210ENST00000567654 TSPY3P0CV98 308 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 TSPY8P0CW00 308 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 LIG1P18858 919 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 EPHA1P21709 976 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 NOVP48745 357 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 RCAN1P53805 252 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 TGFB2P61812 414 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 SSRP1Q08945 709 aaKnown RBP6.62□□□□□ -1.35
SF3B3-210ENST00000567654 TCP10Q12799 353 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 SPRED3Q2MJR0 410 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 CFAP100Q494V2 611 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.62□□□□□ -1.35
SF3B3-210ENST00000567654 SYNE3Q6ZMZ3 975 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 TMTC3Q6ZXV5 915 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 CERS3Q8IU89 383 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 WFDC8Q8IUA0 241 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 RTKN2Q8IZC4 609 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 ANKS1AQ92625 1134 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 NXPE3Q969Y0 559 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 CEP95Q96GE4 821 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 SCARF2Q96GP6 870 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-210ENST00000567654 PRMT6Q96LA8 375 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-210ENST00000567654 TMEM47Q9BQJ4 181 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 EHD4Q9H223 541 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 CPVLQ9H3G5 476 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 ZSCAN16Q9H4T2 348 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-210ENST00000567654 TDRD3Q9H7E2 651 aaKnown RBP6.62□□□□□ -1.35
SF3B3-210ENST00000567654 LIN7BQ9HAP6 207 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 PRDM6Q9NQX0 595 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 TCP11L1Q9NUJ3 509 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 PIM2Q9P1W9 311 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 PPP1R1BQ9UD71 204 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-210ENST00000567654 CLIC4Q9Y696 253 aa6.62□□□□□ -1.35
SF3B3-210ENST00000567654 COL2A1P02458 1487 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-210ENST00000567654 RLFQ13129 1914 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 SYCE3A1L190 88 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 LINC01387J3KSC0 135 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 CYTH3O43739 400 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 CDKL5O76039 1030 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 DEXIO95424 95 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 VIL1P09327 827 aaKnown RBP6.61□□□□□ -1.35
SF3B3-210ENST00000567654 POLD1P28340 1107 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 GRIA4P48058 902 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 RBM5P52756 815 aaKnown RBP eCLIP6.61□□□□□ -1.35
SF3B3-210ENST00000567654 ZNF445P59923 1031 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 UBE2HP62256 183 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 JAG1P78504 1218 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 HDLBPQ00341 1268 aaKnown RBP6.61□□□□□ -1.35
SF3B3-210ENST00000567654 CXCL9Q07325 125 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 RRP1BQ14684 758 aaKnown RBP6.61□□□□□ -1.35
SF3B3-210ENST00000567654 GRM4Q14833 912 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 NPY5RQ15761 445 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 DALRD3Q5D0E6 543 aaKnown RBP6.61□□□□□ -1.35
SF3B3-210ENST00000567654 EARS2Q5JPH6 523 aaKnown RBP6.61□□□□□ -1.35
SF3B3-210ENST00000567654 HGSNATQ68CP4 663 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 CATIPQ7Z7H3 387 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 AMOTL1Q8IY63 956 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 ZNF444Q8N0Y2 327 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-210ENST00000567654 TMTC2Q8N394 836 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 PIBF1Q8WXW3 757 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 TTC9Q92623 222 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 SPATA32Q96LK8 384 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 TCF12Q99081 682 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 MRIQ9BWK5 157 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 IDI2Q9BXS1 227 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 RNF26Q9BY78 433 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-210ENST00000567654 PANK2Q9BZ23 570 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 MUC3BQ9H195 1237 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 GOLPH3LQ9H4A5 285 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 VPS54Q9P1Q0 977 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 MAD2L2Q9UI95 211 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 ATP6V1DQ9Y5K8 247 aa6.61□□□□□ -1.35
SF3B3-210ENST00000567654 ATRNL1Q5VV63 1379 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 CLRN2A0PK11 232 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms