RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 PSEN2P49810 448 aa14.08□□□□□ -0.16
RNF40-211ENST00000567365 ACTR2P61160 394 aa14.08□□□□□ -0.16
RNF40-211ENST00000567365 PTPN11Q06124 597 aaPredicted RBP14.08□□□□□ -0.16
RNF40-211ENST00000567365 SH3RF1Q7Z6J0 888 aa14.08□□□□□ -0.16
RNF40-211ENST00000567365 SEPT1Q8WYJ6 367 aa14.08□□□□□ -0.16
RNF40-211ENST00000567365 RIT2Q99578 217 aa14.08□□□□□ -0.16
RNF40-211ENST00000567365 ZNF577Q9BSK1 485 aa14.08□□□□□ -0.16
RNF40-211ENST00000567365 TBC1D22BQ9NU19 505 aa14.08□□□□□ -0.16
RNF40-211ENST00000567365 KIF3AQ9Y496 699 aa14.08□□□□□ -0.16
RNF40-211ENST00000567365 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.08□□□□□ -0.16
RNF40-211ENST00000567365 EMSYQ7Z589 1322 aa14.08□□□□□ -0.16
RNF40-211ENST00000567365 TRIM43BA6NCK2 446 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 H3BRB1 525 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 NOP56O00567 594 aaKnown RBP14.07□□□□□ -0.16
RNF40-211ENST00000567365 B4GALT4O60513 344 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 PQBP1O60828 265 aaKnown RBP14.07□□□□□ -0.16
RNF40-211ENST00000567365 ITGB8P26012 769 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 TCF7P36402 384 aaPredicted RBP14.07□□□□□ -0.16
RNF40-211ENST00000567365 HIC1Q14526 733 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 MFSD10Q14728 455 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 LETM2Q2VYF4 491 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 ABHD15Q6UXT9 468 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 TRIM50Q86XT4 487 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 PPP1R13LQ8WUF5 828 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 HAS1Q92839 578 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 VTI1AQ96AJ9 217 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 TRIM43Q96BQ3 446 aaPredicted RBP14.07□□□□□ -0.16
RNF40-211ENST00000567365 SDF4Q9BRK5 362 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 KATNAL1Q9BW62 490 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 TUT1Q9H6E5 874 aaKnown RBP14.07□□□□□ -0.16
RNF40-211ENST00000567365 SMC3Q9UQE7 1217 aa14.07□□□□□ -0.16
RNF40-211ENST00000567365 TRIP12Q14669 1992 aaPredicted RBP14.07□□□□□ -0.16
RNF40-211ENST00000567365 SOX1O00570 391 aaPredicted RBP14.06□□□□□ -0.16
RNF40-211ENST00000567365 CLTBP09497 229 aa14.06□□□□□ -0.16
RNF40-211ENST00000567365 SP4Q02446 784 aa14.06□□□□□ -0.16
RNF40-211ENST00000567365 SAFBQ15424 915 aaKnown RBP eCLIP14.06□□□□□ -0.16
RNF40-211ENST00000567365 KIAA0753Q2KHM9 967 aa14.06□□□□□ -0.16
RNF40-211ENST00000567365 ZNF746Q6NUN9 644 aaPredicted RBP14.06□□□□□ -0.16
RNF40-211ENST00000567365 NOSTRINQ8IVI9 506 aa14.06□□□□□ -0.16
RNF40-211ENST00000567365 GJA10Q969M2 543 aa14.06□□□□□ -0.16
RNF40-211ENST00000567365 UIMC1Q96RL1 719 aa14.06□□□□□ -0.16
RNF40-211ENST00000567365 TRPV6Q9H1D0 765 aa14.06□□□□□ -0.16
RNF40-211ENST00000567365 DDX25Q9UHL0 483 aaKnown RBP14.06□□□□□ -0.16
RNF40-211ENST00000567365 GTF2IRD1Q9UHL9 959 aa14.06□□□□□ -0.16
RNF40-211ENST00000567365 ZMYND8Q9ULU4 1186 aaPredicted RBP14.06□□□□□ -0.16
RNF40-211ENST00000567365 DCDC2CA8MYV0 355 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 TBX3O15119 743 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 SUPT20HL2P0C7V6 817 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 TOB1P50616 345 aaPredicted RBP14.05□□□□□ -0.16
RNF40-211ENST00000567365 ADAM17P78536 824 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 KRT76Q01546 638 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 GDF6Q6KF10 455 aaPredicted RBP14.05□□□□□ -0.16
RNF40-211ENST00000567365 POTEDQ86YR6 584 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 AFAP1L1Q8TED9 768 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 FAM20AQ96MK3 541 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 NAP1L4Q99733 375 aaKnown RBP14.05□□□□□ -0.16
RNF40-211ENST00000567365 GDF15Q99988 308 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 RNPEPQ9H4A4 650 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 TRMT13Q9NUP7 481 aaKnown RBP14.05□□□□□ -0.16
RNF40-211ENST00000567365 HDAC6Q9UBN7 1215 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 VAV3Q9UKW4 847 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 SZT2Q5T011 3432 aa14.05□□□□□ -0.16
RNF40-211ENST00000567365 DDX39AO00148 427 aaKnown RBP14.04□□□□□ -0.16
RNF40-211ENST00000567365 CCNT1O60563 726 aaKnown RBP14.04□□□□□ -0.16
RNF40-211ENST00000567365 SYN1P17600 705 aa14.04□□□□□ -0.16
RNF40-211ENST00000567365 TRAPPC10P48553 1259 aa14.04□□□□□ -0.16
RNF40-211ENST00000567365 SPIRE1Q08AE8 756 aa14.04□□□□□ -0.16
RNF40-211ENST00000567365 UTP14CQ5TAP6 766 aaKnown RBP14.04□□□□□ -0.16
RNF40-211ENST00000567365 LRCH2Q5VUJ6 765 aa14.04□□□□□ -0.16
RNF40-211ENST00000567365 PLPPR4Q7Z2D5 763 aa14.04□□□□□ -0.16
RNF40-211ENST00000567365 CCDC60Q8IWA6 550 aaPredicted RBP14.04□□□□□ -0.16
RNF40-211ENST00000567365 SMAP1Q8IYB5 467 aaPredicted RBP14.04□□□□□ -0.16
RNF40-211ENST00000567365 MTMR9Q96QG7 549 aa14.04□□□□□ -0.16
RNF40-211ENST00000567365 UNC45AQ9H3U1 944 aa14.04□□□□□ -0.16
RNF40-211ENST00000567365 SMARCAD1Q9H4L7 1026 aa14.04□□□□□ -0.16
RNF40-211ENST00000567365 TRIOBPQ9H2D6 2365 aa14.04□□□□□ -0.16
RNF40-211ENST00000567365 MYH9P35579 1960 aaKnown RBP14.03□□□□□ -0.16
RNF40-211ENST00000567365 GAS7O60861 476 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 ATP4AP20648 1035 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 RBL2Q08999 1139 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 PPP2R5CQ13362 524 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 ORC2Q13416 577 aaPredicted RBP14.03□□□□□ -0.16
RNF40-211ENST00000567365 LARP1BQ659C4 914 aaKnown RBP14.03□□□□□ -0.16
RNF40-211ENST00000567365 C4orf32Q8N8J7 132 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 RDM1Q8NG50 284 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 VWCEQ96DN2 955 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 LRCH3Q96II8 777 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 NOC4LQ9BVI4 516 aaKnown RBP14.03□□□□□ -0.16
RNF40-211ENST00000567365 TMEM60Q9H2L4 133 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 TMEM39AQ9NV64 488 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 ERAP1Q9NZ08 941 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 ZNF215Q9UL58 517 aaPredicted RBP14.03□□□□□ -0.16
RNF40-211ENST00000567365 PCDHA10Q9Y5I2 948 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 MAFBQ9Y5Q3 323 aaPredicted RBP14.03□□□□□ -0.16
RNF40-211ENST00000567365 IGSF9BQ9UPX0 1349 aa14.03□□□□□ -0.16
RNF40-211ENST00000567365 TANC1Q9C0D5 1861 aa14.02□□□□□ -0.16
RNF40-211ENST00000567365 UMODL1Q5DID0 1318 aa14.02□□□□□ -0.17
RNF40-211ENST00000567365 WDR64B1ANS9 1081 aa14.02□□□□□ -0.17
RNF40-211ENST00000567365 TLR3O15455 904 aaKnown RBP14.02□□□□□ -0.17
RNF40-211ENST00000567365 TIMP1P01033 207 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms