RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 A6NJR5 290 aa18.9■□□□□ 0.62
CLN6-208ENST00000567060 IPO5O00410 1097 aaKnown RBP18.9■□□□□ 0.62
CLN6-208ENST00000567060 LAD1O00515 517 aa18.9■□□□□ 0.62
CLN6-208ENST00000567060 ADCY6O43306 1168 aa18.9■□□□□ 0.62
CLN6-208ENST00000567060 GGPS1O95749 300 aa18.9■□□□□ 0.62
CLN6-208ENST00000567060 BMP15O95972 392 aa18.9■□□□□ 0.62
CLN6-208ENST00000567060 ARHGAP1Q07960 439 aa18.9■□□□□ 0.62
CLN6-208ENST00000567060 FAAP100Q0VG06 881 aa18.9■□□□□ 0.62
CLN6-208ENST00000567060 LY6KQ17RY6 165 aa18.9■□□□□ 0.62
CLN6-208ENST00000567060 KLHDC9Q8NEP7 349 aa18.9■□□□□ 0.62
CLN6-208ENST00000567060 CYP2W1Q8TAV3 490 aa18.9■□□□□ 0.62
CLN6-208ENST00000567060 SYMPKQ92797 1274 aaKnown RBP18.9■□□□□ 0.62
CLN6-208ENST00000567060 ZNF577Q9BSK1 485 aa18.9■□□□□ 0.62
CLN6-208ENST00000567060 A0A1W2PQ45 241 aaPredicted RBP18.89■□□□□ 0.61
CLN6-208ENST00000567060 A0A1W2PQY0 241 aa18.89■□□□□ 0.61
CLN6-208ENST00000567060 DYNC1LI2O43237 492 aaPredicted RBP18.89■□□□□ 0.61
CLN6-208ENST00000567060 PQBP1O60828 265 aaKnown RBP18.89■□□□□ 0.61
CLN6-208ENST00000567060 CABYRO75952 493 aa18.89■□□□□ 0.61
CLN6-208ENST00000567060 BAG4O95429 457 aaKnown RBP18.89■□□□□ 0.61
CLN6-208ENST00000567060 TDP2O95551 362 aa18.89■□□□□ 0.61
CLN6-208ENST00000567060 ARP10275 920 aa18.89■□□□□ 0.61
CLN6-208ENST00000567060 HOXD8P13378 290 aaPredicted RBP18.89■□□□□ 0.61
CLN6-208ENST00000567060 RAG1P15918 1043 aa18.89■□□□□ 0.61
CLN6-208ENST00000567060 FSCN1Q16658 493 aaKnown RBP18.89■□□□□ 0.61
CLN6-208ENST00000567060 TTC38Q5R3I4 469 aa18.89■□□□□ 0.61
CLN6-208ENST00000567060 SLC5A5Q92911 643 aa18.89■□□□□ 0.61
CLN6-208ENST00000567060 LENG1Q96BZ8 264 aaPredicted RBP18.89■□□□□ 0.61
CLN6-208ENST00000567060 SEZ6LQ9BYH1 1024 aa18.89■□□□□ 0.61
CLN6-208ENST00000567060 JPH1Q9HDC5 661 aaPredicted RBP18.89■□□□□ 0.61
CLN6-208ENST00000567060 KCNMB3Q9NPA1 279 aa18.89■□□□□ 0.61
CLN6-208ENST00000567060 POLR3EQ9NVU0 708 aa18.89■□□□□ 0.61
CLN6-208ENST00000567060 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.88■□□□□ 0.61
CLN6-208ENST00000567060 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.88■□□□□ 0.61
CLN6-208ENST00000567060 FAM205CA6NFA0 338 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 MSH4O15457 936 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 NEMFO60524 1076 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 PPFIA4O75335 1185 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 C6orf222P0C671 652 aaPredicted RBP18.88■□□□□ 0.61
CLN6-208ENST00000567060 ZSCAN22P10073 491 aaPredicted RBP18.88■□□□□ 0.61
CLN6-208ENST00000567060 DNAJB2P25686 324 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 KRT76Q01546 638 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 SP2Q02086 613 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 FPGSQ05932 587 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 ANKRD33Q7Z3H0 272 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 RDM1Q8NG50 284 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 ETNPPLQ8TBG4 499 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 ZFP91Q96JP5 570 aaPredicted RBP18.88■□□□□ 0.61
CLN6-208ENST00000567060 SPATA33Q96N06 139 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 TSHZ2Q9NRE2 1034 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 TMEM39AQ9NV64 488 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 SLC9A2Q9UBY0 812 aa18.88■□□□□ 0.61
CLN6-208ENST00000567060 RBM19Q9Y4C8 960 aaKnown RBP18.88■□□□□ 0.61
CLN6-208ENST00000567060 NOP56O00567 594 aaKnown RBP18.87■□□□□ 0.61
CLN6-208ENST00000567060 ATP9AO75110 1047 aa18.87■□□□□ 0.61
CLN6-208ENST00000567060 NUCB2P80303 420 aa18.87■□□□□ 0.61
CLN6-208ENST00000567060 RESTQ13127 1097 aa18.87■□□□□ 0.61
CLN6-208ENST00000567060 DGKDQ16760 1214 aa18.87■□□□□ 0.61
CLN6-208ENST00000567060 GNASQ5JWF2 1037 aa18.87■□□□□ 0.61
CLN6-208ENST00000567060 ATL3Q6DD88 541 aa18.87■□□□□ 0.61
CLN6-208ENST00000567060 ZNF746Q6NUN9 644 aaPredicted RBP18.87■□□□□ 0.61
CLN6-208ENST00000567060 SMAP1Q8IYB5 467 aaPredicted RBP18.87■□□□□ 0.61
CLN6-208ENST00000567060 SPRYD3Q8NCJ5 442 aa18.87■□□□□ 0.61
CLN6-208ENST00000567060 TOX2Q96NM4 488 aa18.87■□□□□ 0.61
CLN6-208ENST00000567060 TEKT3Q9BXF9 490 aa18.87■□□□□ 0.61
CLN6-208ENST00000567060 CEP131Q9UPN4 1083 aa18.87■□□□□ 0.61
CLN6-208ENST00000567060 ATP6V1DQ9Y5K8 247 aa18.87■□□□□ 0.61
CLN6-208ENST00000567060 XIRP2A4UGR9 3374 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 CTAGE5O15320 804 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 DHX15O43143 795 aaKnown RBP18.86■□□□□ 0.61
CLN6-208ENST00000567060 SLC37A4O43826 429 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 GAS7O60861 476 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 MMP3P08254 477 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 SFNP31947 248 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 TOB1P50616 345 aaPredicted RBP18.86■□□□□ 0.61
CLN6-208ENST00000567060 CALCRLQ16602 461 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 TJAP1Q5JTD0 557 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 LRCH2Q5VUJ6 765 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 CCSAPQ6IQ19 270 aaPredicted RBP18.86■□□□□ 0.61
CLN6-208ENST00000567060 C16orf59Q7L2K0 433 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 CYFIP1Q7L576 1253 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 SEPT1Q8WYJ6 367 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 COPS5Q92905 334 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 ZNF576Q9H609 170 aa18.86■□□□□ 0.61
CLN6-208ENST00000567060 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.86■□□□□ 0.61
CLN6-208ENST00000567060 CIZ1Q9ULV3 898 aaPredicted RBP18.86■□□□□ 0.61
CLN6-208ENST00000567060 MORC2Q9Y6X9 1032 aaPredicted RBP18.86■□□□□ 0.61
CLN6-208ENST00000567060 MARCH6O60337 910 aa18.85■□□□□ 0.61
CLN6-208ENST00000567060 PSMD10O75832 226 aa18.85■□□□□ 0.61
CLN6-208ENST00000567060 BRD1O95696 1058 aa18.85■□□□□ 0.61
CLN6-208ENST00000567060 F13A1P00488 732 aa18.85■□□□□ 0.61
CLN6-208ENST00000567060 MCM7P33993 719 aa18.85■□□□□ 0.61
CLN6-208ENST00000567060 PRPHP41219 470 aa18.85■□□□□ 0.61
CLN6-208ENST00000567060 JAK3P52333 1124 aa18.85■□□□□ 0.61
CLN6-208ENST00000567060 ACLYP53396 1101 aa18.85■□□□□ 0.61
CLN6-208ENST00000567060 ITGB3BPQ13352 177 aaPredicted RBP18.85■□□□□ 0.61
CLN6-208ENST00000567060 AFG1LQ8WV93 481 aa18.85■□□□□ 0.61
CLN6-208ENST00000567060 MTMR9Q96QG7 549 aa18.85■□□□□ 0.61
CLN6-208ENST00000567060 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLN6-208ENST00000567060 KATNAL1Q9BW62 490 aa18.85■□□□□ 0.61
CLN6-208ENST00000567060 CHD7Q9P2D1 2997 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms