RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 H0Y858 1186 aa19.58■□□□□ 0.72
CDH3-205ENST00000566808 MYCLP12524 364 aaPredicted RBP19.58■□□□□ 0.72
CDH3-205ENST00000566808 ATF7P17544 494 aaPredicted RBP19.58■□□□□ 0.72
CDH3-205ENST00000566808 ASPRV1Q53RT3 343 aa19.58■□□□□ 0.72
CDH3-205ENST00000566808 ASCL5Q7RTU5 278 aa19.58■□□□□ 0.72
CDH3-205ENST00000566808 RPGRIP1Q96KN7 1286 aa19.58■□□□□ 0.72
CDH3-205ENST00000566808 DCTPP1Q9H773 170 aa19.58■□□□□ 0.72
CDH3-205ENST00000566808 TLR9Q9NR96 1032 aa19.58■□□□□ 0.72
CDH3-205ENST00000566808 BARX2Q9UMQ3 279 aaPredicted RBP19.58■□□□□ 0.72
CDH3-205ENST00000566808 EPG5Q9HCE0 2579 aa19.58■□□□□ 0.72
CDH3-205ENST00000566808 FSD2A1L4K1 749 aa19.57■□□□□ 0.72
CDH3-205ENST00000566808 NOP56O00567 594 aaKnown RBP19.57■□□□□ 0.72
CDH3-205ENST00000566808 GALR2O43603 387 aaPredicted RBP19.57■□□□□ 0.72
CDH3-205ENST00000566808 KDM4AO75164 1064 aa19.57■□□□□ 0.72
CDH3-205ENST00000566808 ITGB1P05556 798 aa19.57■□□□□ 0.72
CDH3-205ENST00000566808 GHRP10912 638 aa19.57■□□□□ 0.72
CDH3-205ENST00000566808 DNAJB1P25685 340 aa19.57■□□□□ 0.72
CDH3-205ENST00000566808 NRIP1P48552 1158 aa19.57■□□□□ 0.72
CDH3-205ENST00000566808 SP2Q02086 613 aa19.57■□□□□ 0.72
CDH3-205ENST00000566808 CMTR2Q8IYT2 770 aaKnown RBP19.57■□□□□ 0.72
CDH3-205ENST00000566808 USP26Q9BXU7 913 aa19.57■□□□□ 0.72
CDH3-205ENST00000566808 SETD4Q9NVD3 440 aa19.57■□□□□ 0.72
CDH3-205ENST00000566808 OPLAHO14841 1288 aa19.56■□□□□ 0.72
CDH3-205ENST00000566808 DGKIO75912 1065 aa19.56■□□□□ 0.72
CDH3-205ENST00000566808 FGAP02671 866 aa19.56■□□□□ 0.72
CDH3-205ENST00000566808 ADAM17P78536 824 aa19.56■□□□□ 0.72
CDH3-205ENST00000566808 PGM5Q15124 567 aa19.56■□□□□ 0.72
CDH3-205ENST00000566808 STOX1Q6ZVD7 989 aa19.56■□□□□ 0.72
CDH3-205ENST00000566808 VSIG10LQ86VR7 867 aa19.56■□□□□ 0.72
CDH3-205ENST00000566808 PNMA1Q8ND90 353 aa19.56■□□□□ 0.72
CDH3-205ENST00000566808 LMBR1Q8WVP7 490 aa19.56■□□□□ 0.72
CDH3-205ENST00000566808 EHMT1Q9H9B1 1298 aa19.56■□□□□ 0.72
CDH3-205ENST00000566808 MAP3K20Q9NYL2 800 aaKnown RBP19.56■□□□□ 0.72
CDH3-205ENST00000566808 ZNF215Q9UL58 517 aaPredicted RBP19.56■□□□□ 0.72
CDH3-205ENST00000566808 MRPL42Q9Y6G3 142 aaKnown RBP19.56■□□□□ 0.72
CDH3-205ENST00000566808 DHX16O60231 1041 aaKnown RBP19.55■□□□□ 0.72
CDH3-205ENST00000566808 CHRNA1P02708 482 aa19.55■□□□□ 0.72
CDH3-205ENST00000566808 CCND2P30279 289 aa19.55■□□□□ 0.72
CDH3-205ENST00000566808 NBL1P41271 181 aa19.55■□□□□ 0.72
CDH3-205ENST00000566808 ARHGAP4P98171 946 aa19.55■□□□□ 0.72
CDH3-205ENST00000566808 MFSD6Q6ZSS7 791 aa19.55■□□□□ 0.72
CDH3-205ENST00000566808 DGKHQ86XP1 1220 aa19.55■□□□□ 0.72
CDH3-205ENST00000566808 IL31RAQ8NI17 732 aa19.55■□□□□ 0.72
CDH3-205ENST00000566808 SPPL3Q8TCT6 385 aa19.55■□□□□ 0.72
CDH3-205ENST00000566808 SUSD6Q92537 303 aa19.55■□□□□ 0.72
CDH3-205ENST00000566808 EP300Q09472 2414 aaPredicted RBP19.54■□□□□ 0.72
CDH3-205ENST00000566808 HAND2P61296 217 aa19.54■□□□□ 0.72
CDH3-205ENST00000566808 LPIN1Q14693 890 aa19.54■□□□□ 0.72
CDH3-205ENST00000566808 TAF2Q6P1X5 1199 aa19.54■□□□□ 0.72
CDH3-205ENST00000566808 SAMD3Q8N6K7 520 aa19.54■□□□□ 0.72
CDH3-205ENST00000566808 KLHL23Q8NBE8 558 aa19.54■□□□□ 0.72
CDH3-205ENST00000566808 POF1BQ8WVV4 589 aa19.54■□□□□ 0.72
CDH3-205ENST00000566808 ESR2Q92731 530 aa19.54■□□□□ 0.72
CDH3-205ENST00000566808 AMNQ9BXJ7 453 aa19.54■□□□□ 0.72
CDH3-205ENST00000566808 RNF41Q9H4P4 317 aaPredicted RBP19.54■□□□□ 0.72
CDH3-205ENST00000566808 HELLSQ9NRZ9 838 aa19.54■□□□□ 0.72
CDH3-205ENST00000566808 LOXHD1Q8IVV2 1947 aa19.53■□□□□ 0.72
CDH3-205ENST00000566808 ENPP3O14638 875 aa19.53■□□□□ 0.72
CDH3-205ENST00000566808 NT5C2P49902 561 aa19.53■□□□□ 0.72
CDH3-205ENST00000566808 MGAT3Q09327 533 aa19.53■□□□□ 0.72
CDH3-205ENST00000566808 METTL7BQ6UX53 244 aa19.53■□□□□ 0.72
CDH3-205ENST00000566808 RBM23Q86U06 439 aaKnown RBP19.53■□□□□ 0.72
CDH3-205ENST00000566808 TRIM50Q86XT4 487 aa19.53■□□□□ 0.72
CDH3-205ENST00000566808 TBC1D10CQ8IV04 446 aa19.53■□□□□ 0.72
CDH3-205ENST00000566808 GPKOWQ92917 476 aaPredicted RBP eCLIP19.53■□□□□ 0.72
CDH3-205ENST00000566808 RIPOR3Q96MK2 946 aa19.53■□□□□ 0.72
CDH3-205ENST00000566808 JMJD4Q9H9V9 463 aa19.53■□□□□ 0.72
CDH3-205ENST00000566808 TRPC6Q9Y210 931 aa19.53■□□□□ 0.72
CDH3-205ENST00000566808 NCOR2Q9Y618 2525 aa19.53■□□□□ 0.72
CDH3-205ENST00000566808 NRCAMQ92823 1304 aa19.52■□□□□ 0.72
CDH3-205ENST00000566808 MX1P20591 662 aa19.52■□□□□ 0.72
CDH3-205ENST00000566808 GNPTABQ3T906 1256 aa19.52■□□□□ 0.72
CDH3-205ENST00000566808 CCDC178Q5BJE1 867 aa19.52■□□□□ 0.72
CDH3-205ENST00000566808 TSHZ1Q6ZSZ6 1077 aa19.52■□□□□ 0.72
CDH3-205ENST00000566808 ZBTB33Q86T24 672 aa19.52■□□□□ 0.72
CDH3-205ENST00000566808 RSPH3Q86UC2 560 aa19.52■□□□□ 0.72
CDH3-205ENST00000566808 OTUD7AQ8TE49 926 aaPredicted RBP19.52■□□□□ 0.72
CDH3-205ENST00000566808 GPR20Q99678 358 aa19.52■□□□□ 0.72
CDH3-205ENST00000566808 ZKSCAN3Q9BRR0 538 aa19.52■□□□□ 0.72
CDH3-205ENST00000566808 TLE6Q9H808 572 aa19.52■□□□□ 0.72
CDH3-205ENST00000566808 KAT14Q9H8E8 782 aa19.52■□□□□ 0.72
CDH3-205ENST00000566808 NEDD4P46934 1319 aa19.51■□□□□ 0.71
CDH3-205ENST00000566808 PDGFBP01127 241 aaPredicted RBP19.51■□□□□ 0.71
CDH3-205ENST00000566808 PARP1P09874 1014 aaKnown RBP19.51■□□□□ 0.71
CDH3-205ENST00000566808 ID4P47928 161 aa19.51■□□□□ 0.71
CDH3-205ENST00000566808 NEDD9Q14511 834 aa19.51■□□□□ 0.71
CDH3-205ENST00000566808 IQCA1Q86XH1 822 aa19.51■□□□□ 0.71
CDH3-205ENST00000566808 NPAS4Q8IUM7 802 aa19.51■□□□□ 0.71
CDH3-205ENST00000566808 ATP8B4Q8TF62 1192 aa19.51■□□□□ 0.71
CDH3-205ENST00000566808 CDCA3Q99618 268 aaPredicted RBP19.51■□□□□ 0.71
CDH3-205ENST00000566808 FNDC1Q4ZHG4 1894 aaPredicted RBP19.5■□□□□ 0.71
CDH3-205ENST00000566808 SRGAP2BP0DMP2 458 aa19.5■□□□□ 0.71
CDH3-205ENST00000566808 HOXA13P31271 388 aaPredicted RBP19.5■□□□□ 0.71
CDH3-205ENST00000566808 UBE3AQ05086 875 aa19.5■□□□□ 0.71
CDH3-205ENST00000566808 FBXO47Q5MNV8 452 aa19.5■□□□□ 0.71
CDH3-205ENST00000566808 MCTP2Q6DN12 878 aa19.5■□□□□ 0.71
CDH3-205ENST00000566808 CRIPAKQ8N1N5 446 aa19.5■□□□□ 0.71
CDH3-205ENST00000566808 LINC01599Q8WXQ3 324 aa19.5■□□□□ 0.71
CDH3-205ENST00000566808 NEK1Q96PY6 1258 aa19.5■□□□□ 0.71
CDH3-205ENST00000566808 FTHL17Q9BXU8 183 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms