RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SENP7Q9BQF6 1050 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 JPH1Q9HDC5 661 aaPredicted RBP12.98□□□□□ -0.33
KARS-207ENST00000566560 KCNMB3Q9NPA1 279 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 XPNPEP3Q9NQH7 507 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 GNEQ9Y223 722 aaKnown RBP12.98□□□□□ -0.33
KARS-207ENST00000566560 ZDHHC9Q9Y397 364 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 NFASCO94856 1347 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 DDX39AO00148 427 aaKnown RBP12.97□□□□□ -0.33
KARS-207ENST00000566560 MARCH6O60337 910 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 GAS7O60861 476 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 ATP9AO75110 1047 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 FARP2O94887 1054 aaPredicted RBP12.97□□□□□ -0.33
KARS-207ENST00000566560 OR52Z1P0C646 297 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 SP4Q02446 784 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 ARHGAP1Q07960 439 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 FOXD4L6Q3SYB3 417 aaPredicted RBP12.97□□□□□ -0.33
KARS-207ENST00000566560 ARSIQ5FYB1 569 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 CELF3Q5SZQ8 465 aaKnown RBP12.97□□□□□ -0.33
KARS-207ENST00000566560 LRCH2Q5VUJ6 765 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 METTL7BQ6UX53 244 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 FOXD4L3Q6VB84 417 aaPredicted RBP12.97□□□□□ -0.33
KARS-207ENST00000566560 CYFIP1Q7L576 1253 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 DHX37Q8IY37 1157 aaKnown RBP12.97□□□□□ -0.33
KARS-207ENST00000566560 SLC5A5Q92911 643 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 GJA10Q969M2 543 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 AP5M1Q9H0R1 490 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 MLXIPQ9HAP2 919 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 SPC25Q9HBM1 224 aa12.97□□□□□ -0.33
KARS-207ENST00000566560 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.97□□□□□ -0.33
KARS-207ENST00000566560 NOP56O00567 594 aaKnown RBP12.96□□□□□ -0.33
KARS-207ENST00000566560 TBX3O15119 743 aa12.96□□□□□ -0.33
KARS-207ENST00000566560 DYNC1LI2O43237 492 aaPredicted RBP12.96□□□□□ -0.33
KARS-207ENST00000566560 PGK1P00558 417 aa12.96□□□□□ -0.33
KARS-207ENST00000566560 GJB1P08034 283 aa12.96□□□□□ -0.33
KARS-207ENST00000566560 C6orf222P0C671 652 aaPredicted RBP12.96□□□□□ -0.33
KARS-207ENST00000566560 MLLT3P42568 568 aaPredicted RBP12.96□□□□□ -0.33
KARS-207ENST00000566560 SLFN12Q8IYM2 578 aa12.96□□□□□ -0.33
KARS-207ENST00000566560 U2AF1L4Q8WU68 220 aaKnown RBP12.96□□□□□ -0.33
KARS-207ENST00000566560 EMID1Q96A84 441 aaPredicted RBP12.96□□□□□ -0.33
KARS-207ENST00000566560 SPATA33Q96N06 139 aa12.96□□□□□ -0.33
KARS-207ENST00000566560 ZNF396Q96N95 335 aaPredicted RBP12.96□□□□□ -0.33
KARS-207ENST00000566560 TEKT3Q9BXF9 490 aa12.96□□□□□ -0.33
KARS-207ENST00000566560 FTOQ9C0B1 505 aaKnown RBP eCLIP12.96□□□□□ -0.33
KARS-207ENST00000566560 UPF3AQ9H1J1 476 aaKnown RBP12.96□□□□□ -0.33
KARS-207ENST00000566560 TMEM60Q9H2L4 133 aa12.96□□□□□ -0.33
KARS-207ENST00000566560 TBC1D22BQ9NU19 505 aa12.96□□□□□ -0.33
KARS-207ENST00000566560 Q9Y3F1 56 aa12.96□□□□□ -0.33
KARS-207ENST00000566560 ATP6V1DQ9Y5K8 247 aa12.96□□□□□ -0.33
KARS-207ENST00000566560 WDR81Q562E7 1941 aa12.96□□□□□ -0.34
KARS-207ENST00000566560 MYADML2A6NDP7 307 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 LAD1O00515 517 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 CHMP2AO43633 222 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 ADAMTS4O75173 837 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 BAG4O95429 457 aaKnown RBP12.95□□□□□ -0.34
KARS-207ENST00000566560 BMP15O95972 392 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 MMP3P08254 477 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 CPT1AP50416 773 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 GJA9P57773 515 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 KRT76Q01546 638 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 PTGDRQ13258 359 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 LAMC2Q13753 1193 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 SF3A1Q15459 793 aaKnown RBP12.95□□□□□ -0.34
KARS-207ENST00000566560 FSCN1Q16658 493 aaKnown RBP12.95□□□□□ -0.34
KARS-207ENST00000566560 TNS4Q8IZW8 715 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 PPTC7Q8NI37 304 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 AFG1LQ8WV93 481 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 HAS1Q92839 578 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 ABHD8Q96I13 439 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 FAM20AQ96MK3 541 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 USP28Q96RU2 1077 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 RIT2Q99578 217 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 CHMP5Q9NZZ3 219 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 SLC9A2Q9UBY0 812 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 CEP131Q9UPN4 1083 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 TCHHQ07283 1943 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 CENPFP49454 3210 aa12.95□□□□□ -0.34
KARS-207ENST00000566560 ELP1O95163 1332 aa12.94□□□□□ -0.34
KARS-207ENST00000566560 DHX15O43143 795 aaKnown RBP12.94□□□□□ -0.34
KARS-207ENST00000566560 PSMD10O75832 226 aa12.94□□□□□ -0.34
KARS-207ENST00000566560 CST5P28325 142 aaPredicted RBP12.94□□□□□ -0.34
KARS-207ENST00000566560 ATP2C1P98194 919 aaPredicted RBP12.94□□□□□ -0.34
KARS-207ENST00000566560 BEX3Q00994 111 aa12.94□□□□□ -0.34
KARS-207ENST00000566560 CEBPZQ03701 1054 aaKnown RBP12.94□□□□□ -0.34
KARS-207ENST00000566560 HSDL1Q3SXM5 330 aa12.94□□□□□ -0.34
KARS-207ENST00000566560 BRDTQ58F21 947 aaPredicted RBP12.94□□□□□ -0.34
KARS-207ENST00000566560 RNF180Q86T96 592 aa12.94□□□□□ -0.34
KARS-207ENST00000566560 MTMR9Q96QG7 549 aa12.94□□□□□ -0.34
KARS-207ENST00000566560 BCAS3Q9H6U6 928 aa12.94□□□□□ -0.34
KARS-207ENST00000566560 POLR3EQ9NVU0 708 aa12.94□□□□□ -0.34
KARS-207ENST00000566560 VAV3Q9UKW4 847 aa12.94□□□□□ -0.34
KARS-207ENST00000566560 OGDHLQ9ULD0 1010 aa12.94□□□□□ -0.34
KARS-207ENST00000566560 CLIC4Q9Y696 253 aa12.94□□□□□ -0.34
KARS-207ENST00000566560 MYH9P35579 1960 aaKnown RBP12.94□□□□□ -0.34
KARS-207ENST00000566560 WDR64B1ANS9 1081 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 CTAGE5O15320 804 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 SGPL1O95470 568 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 CCNE2O96020 404 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 NCLP19338 710 aaKnown RBP12.93□□□□□ -0.34
KARS-207ENST00000566560 TXKP42681 527 aa12.93□□□□□ -0.34
KARS-207ENST00000566560 GJA8P48165 433 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms