RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 DDX41Q9UJV9 622 aaKnown RBP13.54□□□□□ -0.24
SCAMP2-207ENST00000566480 ZSCAN20P17040 1043 aaPredicted RBP13.54□□□□□ -0.24
SCAMP2-207ENST00000566480 MEA1Q16626 185 aa13.54□□□□□ -0.24
SCAMP2-207ENST00000566480 KIAA1328Q86T90 577 aa13.54□□□□□ -0.24
SCAMP2-207ENST00000566480 NUP58Q9BVL2 599 aa13.54□□□□□ -0.24
SCAMP2-207ENST00000566480 NLRC4Q9NPP4 1024 aa13.54□□□□□ -0.24
SCAMP2-207ENST00000566480 VAV3Q9UKW4 847 aa13.54□□□□□ -0.24
SCAMP2-207ENST00000566480 ZNRF3Q9ULT6 936 aa13.54□□□□□ -0.24
SCAMP2-207ENST00000566480 DNM3Q9UQ16 869 aa13.54□□□□□ -0.24
SCAMP2-207ENST00000566480 FOSP01100 380 aaPredicted RBP13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 RPA1P27694 616 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 MMP14P50281 582 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 FKBP3Q00688 224 aaKnown RBP13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 GIT2Q14161 759 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 DALRD3Q5D0E6 543 aaKnown RBP13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 MOXD1Q6UVY6 613 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 RRAGAQ7L523 313 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 SFR1Q86XK3 245 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 EIF2AK1Q9BQI3 630 aaKnown RBP13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 RUSC1Q9BVN2 902 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 IKZF4Q9H2S9 585 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 PKD2L1Q9P0L9 805 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 COL4A3BPQ9Y5P4 624 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 IGLV3-22A0A075B6J6 115 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 MACROD2A1Z1Q3 448 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 LRRC53A6NM62 1247 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 NFKBIEO00221 500 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 ZNF263O14978 683 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 CAP2P40123 477 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 PDE4CQ08493 712 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 KCNMA1Q12791 1236 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 TPH2Q8IWU9 490 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 ERMNQ8TAM6 284 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 AGBL1Q96MI9 1066 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 NAPGQ99747 312 aaPredicted RBP13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 GTPBP4Q9BZE4 634 aaKnown RBP13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 VCPKMTQ9H867 229 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 CDC23Q9UJX2 597 aa13.53□□□□□ -0.24
SCAMP2-207ENST00000566480 SRGAP2O75044 1071 aa13.52□□□□□ -0.24
SCAMP2-207ENST00000566480 PRPF6O94906 941 aaKnown RBP13.52□□□□□ -0.24
SCAMP2-207ENST00000566480 MYBP10242 640 aa13.52□□□□□ -0.24
SCAMP2-207ENST00000566480 KCNA1Q09470 495 aa13.52□□□□□ -0.24
SCAMP2-207ENST00000566480 RETREG2Q8NC44 543 aa13.52□□□□□ -0.24
SCAMP2-207ENST00000566480 FEZ1Q99689 392 aa13.52□□□□□ -0.24
SCAMP2-207ENST00000566480 KCTD10Q9H3F6 313 aa13.52□□□□□ -0.24
SCAMP2-207ENST00000566480 ARHGAP20Q9P2F6 1191 aa13.52□□□□□ -0.24
SCAMP2-207ENST00000566480 ASTN2O75129 1339 aaPredicted RBP13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 PSME4Q14997 1843 aa13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 GCOM1H8Y6P7 765 aaPredicted RBP13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 DDX39AO00148 427 aaKnown RBP13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 FGFR1OPO95684 399 aaKnown RBP13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 POLR2MP0CAP2 368 aa13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 INPP5BP32019 993 aa13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 CHMP4BP1P59074 171 aa13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 ADAM9Q13443 819 aa13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 ARHGAP27Q6ZUM4 889 aa13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 RSRC2Q7L4I2 434 aaKnown RBP13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 CPXCR1Q8N123 301 aa13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 JAKMIP2Q96AA8 810 aa13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 CCDC42Q96M95 316 aa13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 ZNF341Q9BYN7 854 aa13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 ST7Q9NRC1 585 aa13.52□□□□□ -0.25
SCAMP2-207ENST00000566480 CIITAP33076 1130 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 CYLC1P35663 651 aaPredicted RBP13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 RASA3Q14644 834 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 ENOX2Q16206 610 aaKnown RBP13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 TRMT1LQ7Z2T5 733 aaKnown RBP13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 LDHDQ86WU2 507 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 SYT2Q8N9I0 419 aaPredicted RBP13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 FAM20AQ96MK3 541 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 PARD6BQ9BYG5 372 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 RANBP17Q9H2T7 1088 aaKnown RBP13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 HOMER2Q9NSB8 354 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 OGFRQ9NZT2 677 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 ABCB11O95342 1321 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 PIK3CDO00329 1044 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 TBX3O15119 743 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 ATP1A1P05023 1023 aaKnown RBP13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 ARP10275 920 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 NR2F2P24468 414 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 HOXD13P35453 343 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 DMTNQ08495 405 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 LRCH2Q5VUJ6 765 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 OTOP1Q7RTM1 612 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 CACNA2D4Q7Z3S7 1137 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 SRGAP1Q7Z6B7 1085 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 KSR1Q8IVT5 923 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 GOLGA1Q92805 767 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 DYDC2Q96IM9 177 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 MYOZ2Q9NPC6 264 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 FZD1Q9UP38 647 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 PLAGL2Q9UPG8 496 aa13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 COL2A1P02458 1487 aaPredicted RBP13.51□□□□□ -0.25
SCAMP2-207ENST00000566480 IPO7O95373 1038 aaKnown RBP13.5□□□□□ -0.25
SCAMP2-207ENST00000566480 EIF4A3P38919 411 aaKnown RBP13.5□□□□□ -0.25
SCAMP2-207ENST00000566480 ARID5AQ03989 594 aa13.5□□□□□ -0.25
SCAMP2-207ENST00000566480 CHURC1Q8WUH1 139 aa13.5□□□□□ -0.25
SCAMP2-207ENST00000566480 DEF6Q9H4E7 631 aa13.5□□□□□ -0.25
SCAMP2-207ENST00000566480 HAUS4Q9H6D7 363 aa13.5□□□□□ -0.25
SCAMP2-207ENST00000566480 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms