RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 IL17AQ16552 155 aa17.2■□□□□ 0.34
KNOP1-203ENST00000565844 CSPP1Q1MSJ5 1256 aa17.2■□□□□ 0.34
KNOP1-203ENST00000565844 DUSP28Q4G0W2 176 aa17.2■□□□□ 0.34
KNOP1-203ENST00000565844 GJC2Q5T442 439 aaPredicted RBP17.2■□□□□ 0.34
KNOP1-203ENST00000565844 CYFIP1Q7L576 1253 aa17.2■□□□□ 0.34
KNOP1-203ENST00000565844 COPS5Q92905 334 aa17.2■□□□□ 0.34
KNOP1-203ENST00000565844 LENG1Q96BZ8 264 aaPredicted RBP17.2■□□□□ 0.34
KNOP1-203ENST00000565844 BCAS3Q9H6U6 928 aa17.2■□□□□ 0.34
KNOP1-203ENST00000565844 JPH1Q9HDC5 661 aaPredicted RBP17.2■□□□□ 0.34
KNOP1-203ENST00000565844 VAV3Q9UKW4 847 aa17.2■□□□□ 0.34
KNOP1-203ENST00000565844 SZT2Q5T011 3432 aa17.2■□□□□ 0.34
KNOP1-203ENST00000565844 NKRFO15226 690 aaKnown RBP eCLIP17.19■□□□□ 0.34
KNOP1-203ENST00000565844 CHMP2AO43633 222 aa17.19■□□□□ 0.34
KNOP1-203ENST00000565844 GH1P01241 217 aa17.19■□□□□ 0.34
KNOP1-203ENST00000565844 MYCNP04198 464 aaPredicted RBP17.19■□□□□ 0.34
KNOP1-203ENST00000565844 PTGS1P23219 599 aa17.19■□□□□ 0.34
KNOP1-203ENST00000565844 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■■■■■ 27.8
KNOP1-203ENST00000565844 SP4Q02446 784 aa17.19■□□□□ 0.34
KNOP1-203ENST00000565844 CELF3Q5SZQ8 465 aaKnown RBP17.19■□□□□ 0.34
KNOP1-203ENST00000565844 DHX37Q8IY37 1157 aaKnown RBP17.19■□□□□ 0.34
KNOP1-203ENST00000565844 RAB34Q9BZG1 259 aa17.19■□□□□ 0.34
KNOP1-203ENST00000565844 MLXIPQ9HAP2 919 aa17.19■□□□□ 0.34
KNOP1-203ENST00000565844 SLC9A2Q9UBY0 812 aa17.19■□□□□ 0.34
KNOP1-203ENST00000565844 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
KNOP1-203ENST00000565844 WDR81Q562E7 1941 aa17.19■□□□□ 0.34
KNOP1-203ENST00000565844 ELP1O95163 1332 aa17.19■□□□□ 0.34
KNOP1-203ENST00000565844 POTEMA6NI47 508 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 SEPT4O43236 478 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 KRT76Q01546 638 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 GRIN1Q05586 938 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 ARHGAP1Q07960 439 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 SPIRE1Q08AE8 756 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 PPP2R5CQ13362 524 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 NCAPH2Q6IBW4 605 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 METTL7BQ6UX53 244 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 CLIC6Q96NY7 704 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 CSRNP2Q9H175 543 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 UNC45AQ9H3U1 944 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 DDX20Q9UHI6 824 aaKnown RBP17.18■□□□□ 0.34
KNOP1-203ENST00000565844 PCDHA7Q9UN72 937 aa17.18■□□□□ 0.34
KNOP1-203ENST00000565844 CUTAO60888 179 aa17.17■□□□□ 0.34
KNOP1-203ENST00000565844 CCNE2O96020 404 aa17.17■□□□□ 0.34
KNOP1-203ENST00000565844 LONP1P36776 959 aaKnown RBP17.17■□□□□ 0.34
KNOP1-203ENST00000565844 ZNF746Q6NUN9 644 aaPredicted RBP17.17■□□□□ 0.34
KNOP1-203ENST00000565844 TLK2Q86UE8 772 aa17.17■□□□□ 0.34
KNOP1-203ENST00000565844 IGSF22Q8N9C0 903 aa17.17■□□□□ 0.34
KNOP1-203ENST00000565844 OR6J1Q8NGC5 347 aa17.17■□□□□ 0.34
KNOP1-203ENST00000565844 SPATA33Q96N06 139 aa17.17■□□□□ 0.34
KNOP1-203ENST00000565844 LRWD1Q9UFC0 647 aa17.17■□□□□ 0.34
KNOP1-203ENST00000565844 GNEQ9Y223 722 aaKnown RBP17.17■□□□□ 0.34
KNOP1-203ENST00000565844 SAMM50Q9Y512 469 aa17.17■□□□□ 0.34
KNOP1-203ENST00000565844 NOP56O00567 594 aaKnown RBP17.16■□□□□ 0.34
KNOP1-203ENST00000565844 RARBP10826 455 aa17.16■□□□□ 0.34
KNOP1-203ENST00000565844 JAK3P52333 1124 aa17.16■□□□□ 0.34
KNOP1-203ENST00000565844 ACTR2P61160 394 aa17.16■□□□□ 0.34
KNOP1-203ENST00000565844 LAMC2Q13753 1193 aa17.16■□□□□ 0.34
KNOP1-203ENST00000565844 PDIA5Q14554 519 aa17.16■□□□□ 0.34
KNOP1-203ENST00000565844 LRRC26Q2I0M4 334 aa17.16■□□□□ 0.34
KNOP1-203ENST00000565844 TPRNQ4KMQ1 711 aa17.16■□□□□ 0.34
KNOP1-203ENST00000565844 MIER3Q7Z3K6 550 aa17.16■□□□□ 0.34
KNOP1-203ENST00000565844 TMEM87AQ8NBN3 555 aa17.16■□□□□ 0.34
KNOP1-203ENST00000565844 EMID1Q96A84 441 aaPredicted RBP17.16■□□□□ 0.34
KNOP1-203ENST00000565844 TELO2Q9Y4R8 837 aa17.16■□□□□ 0.34
KNOP1-203ENST00000565844 GOLGA6L4A6NEF3 574 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 PP2D1A8MPX8 630 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 WDR64B1ANS9 1081 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 EML1O00423 815 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 DUSP11O75319 330 aaKnown RBP17.15■□□□□ 0.34
KNOP1-203ENST00000565844 CAPN2P17655 700 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 SFNP31947 248 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 ATN1P54259 1190 aaPredicted RBP17.15■□□□□ 0.34
KNOP1-203ENST00000565844 HSDL1Q3SXM5 330 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 SPECC1Q5M775 1068 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 AXDND1Q5T1B0 1012 aaPredicted RBP17.15■□□□□ 0.34
KNOP1-203ENST00000565844 B3GNT9Q6UX72 402 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 SMAP1Q8IYB5 467 aaPredicted RBP17.15■□□□□ 0.34
KNOP1-203ENST00000565844 ZNF579Q8NAF0 562 aaKnown RBP17.15■□□□□ 0.34
KNOP1-203ENST00000565844 PPTC7Q8NI37 304 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 AK8Q96MA6 479 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 SENP6Q9GZR1 1112 aaPredicted RBP17.15■□□□□ 0.34
KNOP1-203ENST00000565844 AP5M1Q9H0R1 490 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 PRO3102Q9H379 93 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 Q9Y3F1 56 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 GOLGA6L22H0YM25 854 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 DYNC1LI2O43237 492 aaPredicted RBP17.15■□□□□ 0.34
KNOP1-203ENST00000565844 COL6A1P12109 1028 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 CDC25AP30304 524 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 ERMNQ8TAM6 284 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 AFG1LQ8WV93 481 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 GPR20Q99678 358 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 XPNPEP3Q9NQH7 507 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 DISC1Q9NRI5 854 aa17.15■□□□□ 0.34
KNOP1-203ENST00000565844 MYH9P35579 1960 aaKnown RBP17.14■□□□□ 0.34
KNOP1-203ENST00000565844 SYNRGQ9UMZ2 1314 aa17.14■□□□□ 0.33
KNOP1-203ENST00000565844 MSCO60682 206 aa17.14■□□□□ 0.33
KNOP1-203ENST00000565844 PRPF40AO75400 957 aaKnown RBP17.14■□□□□ 0.33
KNOP1-203ENST00000565844 PSAPP07602 524 aa17.14■□□□□ 0.33
KNOP1-203ENST00000565844 ADALQ6DHV7 355 aa17.14■□□□□ 0.33
KNOP1-203ENST00000565844 MIS18BP1Q6P0N0 1132 aa17.14■□□□□ 0.33
KNOP1-203ENST00000565844 SHC4Q6S5L8 630 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms