RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 SMIM10L2BP0DMW5 78 aa19.08■□□□□ 0.64
USB1-211ENST00000565662 GALNT17Q6IS24 598 aa19.08■□□□□ 0.64
USB1-211ENST00000565662 CDX2Q99626 313 aaPredicted RBP19.08■□□□□ 0.64
USB1-211ENST00000565662 KCNH7Q9NS40 1196 aa19.08■□□□□ 0.64
USB1-211ENST00000565662 SCN5AQ14524 2016 aa19.08■□□□□ 0.64
USB1-211ENST00000565662 RRN3P2A6NIE6 340 aa19.07■□□□□ 0.64
USB1-211ENST00000565662 DEXIO95424 95 aa19.07■□□□□ 0.64
USB1-211ENST00000565662 CYP3A4P08684 503 aa19.07■□□□□ 0.64
USB1-211ENST00000565662 FOSL2P15408 326 aa19.07■□□□□ 0.64
USB1-211ENST00000565662 XBP1P17861 261 aa19.07■□□□□ 0.64
USB1-211ENST00000565662 PDIA3P30101 505 aaKnown RBP19.07■□□□□ 0.64
USB1-211ENST00000565662 ARHGAP4P98171 946 aa19.07■□□□□ 0.64
USB1-211ENST00000565662 RPAINQ86UA6 219 aa19.07■□□□□ 0.64
USB1-211ENST00000565662 APBB2Q92870 758 aa19.07■□□□□ 0.64
USB1-211ENST00000565662 CTAGE1Q96RT6 745 aa19.07■□□□□ 0.64
USB1-211ENST00000565662 TTYH1Q9H313 450 aaPredicted RBP19.07■□□□□ 0.64
USB1-211ENST00000565662 IKBKEQ14164 716 aa19.06■□□□□ 0.64
USB1-211ENST00000565662 TYW1BQ6NUM6 668 aa19.06■□□□□ 0.64
USB1-211ENST00000565662 GLG1Q92896 1179 aa19.06■□□□□ 0.64
USB1-211ENST00000565662 FAM161BQ96MY7 647 aa19.06■□□□□ 0.64
USB1-211ENST00000565662 TBC1D22BQ9NU19 505 aa19.06■□□□□ 0.64
USB1-211ENST00000565662 CXXC1Q9P0U4 656 aaPredicted RBP19.06■□□□□ 0.64
USB1-211ENST00000565662 GBF1Q92538 1859 aa19.05■□□□□ 0.64
USB1-211ENST00000565662 RSPH10B2B2RC85 870 aa19.05■□□□□ 0.64
USB1-211ENST00000565662 MEIS1O00470 390 aa19.05■□□□□ 0.64
USB1-211ENST00000565662 RSPH10BP0C881 870 aa19.05■□□□□ 0.64
USB1-211ENST00000565662 CPA1P15085 419 aa19.05■□□□□ 0.64
USB1-211ENST00000565662 SSRP1Q08945 709 aaKnown RBP19.05■□□□□ 0.64
USB1-211ENST00000565662 NTRK3Q16288 839 aa19.05■□□□□ 0.64
USB1-211ENST00000565662 FAM160B1Q5W0V3 765 aa19.05■□□□□ 0.64
USB1-211ENST00000565662 PLPPR4Q7Z2D5 763 aa19.05■□□□□ 0.64
USB1-211ENST00000565662 SLC17A8Q8NDX2 589 aa19.05■□□□□ 0.64
USB1-211ENST00000565662 DHX38Q92620 1227 aaKnown RBP19.05■□□□□ 0.64
USB1-211ENST00000565662 SLC26A6Q9BXS9 759 aa19.05■□□□□ 0.64
USB1-211ENST00000565662 RNPEPQ9H4A4 650 aa19.05■□□□□ 0.64
USB1-211ENST00000565662 PDRG1Q9NUG6 133 aa19.05■□□□□ 0.64
USB1-211ENST00000565662 LAMA2P24043 3122 aaKnown RBP19.04■□□□□ 0.64
USB1-211ENST00000565662 SORBS3O60504 671 aa19.04■□□□□ 0.64
USB1-211ENST00000565662 LGR5O75473 907 aa19.04■□□□□ 0.64
USB1-211ENST00000565662 THPOP40225 353 aa19.04■□□□□ 0.64
USB1-211ENST00000565662 SP4Q02446 784 aa19.04■□□□□ 0.64
USB1-211ENST00000565662 PPFIA1Q13136 1202 aa19.04■□□□□ 0.64
USB1-211ENST00000565662 TRIM71Q2Q1W2 868 aaKnown RBP19.04■□□□□ 0.64
USB1-211ENST00000565662 UTP14CQ5TAP6 766 aaKnown RBP19.04■□□□□ 0.64
USB1-211ENST00000565662 PPP2R2DQ66LE6 453 aa19.04■□□□□ 0.64
USB1-211ENST00000565662 SMAP1Q8IYB5 467 aaPredicted RBP19.04■□□□□ 0.64
USB1-211ENST00000565662 ZFP91Q96JP5 570 aaPredicted RBP19.04■□□□□ 0.64
USB1-211ENST00000565662 ATP9AO75110 1047 aa19.03■□□□□ 0.64
USB1-211ENST00000565662 TOB2Q14106 344 aaPredicted RBP19.03■□□□□ 0.64
USB1-211ENST00000565662 PKN1Q16512 942 aa19.03■□□□□ 0.64
USB1-211ENST00000565662 ZNF618Q5T7W0 954 aa19.03■□□□□ 0.64
USB1-211ENST00000565662 MAFAQ8NHW3 353 aaPredicted RBP19.03■□□□□ 0.64
USB1-211ENST00000565662 LMBR1Q8WVP7 490 aa19.03■□□□□ 0.64
USB1-211ENST00000565662 AGO4Q9HCK5 861 aaKnown RBP19.03■□□□□ 0.64
USB1-211ENST00000565662 TUBE1Q9UJT0 475 aa19.03■□□□□ 0.64
USB1-211ENST00000565662 STK36Q9NRP7 1315 aa19.02■□□□□ 0.64
USB1-211ENST00000565662 USP11P51784 963 aa19.02■□□□□ 0.64
USB1-211ENST00000565662 ADAM17P78536 824 aa19.02■□□□□ 0.64
USB1-211ENST00000565662 KRT76Q01546 638 aa19.02■□□□□ 0.64
USB1-211ENST00000565662 PLA2G4DQ86XP0 818 aa19.02■□□□□ 0.64
USB1-211ENST00000565662 HERC6Q8IVU3 1022 aa19.02■□□□□ 0.64
USB1-211ENST00000565662 CRYGNQ8WXF5 182 aa19.02■□□□□ 0.64
USB1-211ENST00000565662 WASF1Q92558 559 aa19.02■□□□□ 0.64
USB1-211ENST00000565662 SEPT8Q92599 483 aa19.02■□□□□ 0.64
USB1-211ENST00000565662 PHKBQ93100 1093 aa19.02■□□□□ 0.64
USB1-211ENST00000565662 IL17RAQ96F46 866 aa19.02■□□□□ 0.64
USB1-211ENST00000565662 COL1A2P08123 1366 aa19.02■□□□□ 0.64
USB1-211ENST00000565662 GSTTP1A0A1W2PQM5 241 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 MBLAC1A4D2B0 266 aaPredicted RBP19.01■□□□□ 0.63
USB1-211ENST00000565662 M0QZ92 97 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 IPO5O00410 1097 aaKnown RBP19.01■□□□□ 0.63
USB1-211ENST00000565662 TREHO43280 583 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 AMHP03971 560 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 CIITAP33076 1130 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 NLRP5P59047 1200 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 ACTR2P61160 394 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 WDR5P61964 334 aaKnown RBP19.01■□□□□ 0.63
USB1-211ENST00000565662 FAM26DQ5JW98 314 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 JAKMIP3Q5VZ66 844 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 ZNF746Q6NUN9 644 aaPredicted RBP19.01■□□□□ 0.63
USB1-211ENST00000565662 MIS18BP1Q6P0N0 1132 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 TRIM50Q86XT4 487 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 USP38Q8NB14 1042 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 DAGLBQ8NCG7 672 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 MYLIPQ8WY64 445 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 VWCEQ96DN2 955 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 SETD4Q9NVD3 440 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 SQORQ9Y6N5 450 aa19.01■□□□□ 0.63
USB1-211ENST00000565662 TLL1O43897 1013 aa19■□□□□ 0.63
USB1-211ENST00000565662 NBNO60934 754 aa19■□□□□ 0.63
USB1-211ENST00000565662 ATG7O95352 703 aa19■□□□□ 0.63
USB1-211ENST00000565662 STAT5BP51692 787 aa19■□□□□ 0.63
USB1-211ENST00000565662 CCT2P78371 535 aaKnown RBP19■□□□□ 0.63
USB1-211ENST00000565662 GRIK4Q16099 956 aa19■□□□□ 0.63
USB1-211ENST00000565662 PLEKHG4Q58EX7 1191 aa19■□□□□ 0.63
USB1-211ENST00000565662 ZNF710Q8N1W2 664 aa19■□□□□ 0.63
USB1-211ENST00000565662 IL27Q8NEV9 243 aa19■□□□□ 0.63
USB1-211ENST00000565662 NAP1L4Q99733 375 aaKnown RBP19■□□□□ 0.63
USB1-211ENST00000565662 ZNF577Q9BSK1 485 aa19■□□□□ 0.63
USB1-211ENST00000565662 ZBED2Q9BTP6 218 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms