RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 TOMM70O94826 608 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 POLGP54098 1239 aaPredicted RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 ARL13BQ3SXY8 428 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 ZSCAN32Q9NX65 697 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 ADAM21Q9UKJ8 722 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 MROH5Q6ZUA9 1318 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 CFLARO15519 480 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 ABCE1P61221 599 aaKnown RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 BASP1P80723 227 aaKnown RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 KPNB1Q14974 876 aaKnown RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 BEND6Q5SZJ8 279 aaPredicted RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 CAPN12Q6ZSI9 719 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 RFWD2Q8NHY2 731 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 SCG3Q8WXD2 468 aaKnown RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 CCDC127Q96BQ5 260 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 ASCC2Q9H1I8 757 aaPredicted RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 KRT1P04264 644 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 IL10P22301 178 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 SEMA3FQ13275 785 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 NELFCDQ8IXH7 590 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 MCUQ8NE86 351 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 EPS8L2Q9H6S3 715 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 PSTPIP2Q9H939 334 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 DDX25Q9UHL0 483 aaKnown RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 ATP10DQ9P241 1426 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 MECOMQ03112 1051 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 YWHAHQ04917 246 aaPredicted RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 KLHL38Q2WGJ6 581 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 TPH2Q8IWU9 490 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 PBXIP1Q96AQ6 731 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 ANKRD36BP1Q96IX9 119 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 NSMCE4AQ9NXX6 385 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 SLC8A2Q9UPR5 921 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 ADGRL1O94910 1474 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 KDRP35968 1356 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 TARSL2A2RTX5 802 aaKnown RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 PIK3R2O00459 728 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 MYO1EQ12965 1108 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 DNAJC24Q6P3W2 148 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 TLK2Q86UE8 772 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 GDAP1Q8TB36 358 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 DEPTORQ8TB45 409 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 PITPNM3Q9BZ71 974 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 CCDC90BQ9GZT6 254 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 ZNF556Q9HAH1 456 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 NCOA5Q9HCD5 579 aaKnown RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 IL1RAPL1Q9NZN1 696 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 FBXO2Q9UK22 296 aaPredicted RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 GRID2IPA4D2P6 1211 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 hCG_1984214I3L0E3 225 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 K7ENM7 598 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 TBC1D4O60343 1298 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 PFKFB2O60825 505 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 ACBD5Q5T8D3 534 aaPredicted RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 TTC13Q8NBP0 860 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 ELAC2Q9BQ52 826 aaKnown RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 TAF1DQ9H5J8 278 aaPredicted RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 PA2G4Q9UQ80 394 aaKnown RBP5.46□□□□□ -1.54
SMG1-211ENST00000565324 UGGT2Q9NYU1 1516 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 ZNF263O14978 683 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 MAFGO15525 162 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 PLCH2O75038 1416 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 NDUFA10O95299 355 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 TP53BP2Q13625 1128 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 RSPH1Q8WYR4 309 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 BTBD6Q96KE9 485 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 PCDHB4Q9Y5E5 795 aa5.46□□□□□ -1.54
SMG1-211ENST00000565324 GMNCA6NCL1 334 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 PJA2O43164 708 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 HSPA1AP0DMV8 641 aaKnown RBP5.45□□□□□ -1.54
SMG1-211ENST00000565324 HSPA1BP0DMV9 641 aaKnown RBP5.45□□□□□ -1.54
SMG1-211ENST00000565324 RXRAP19793 462 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 ZBED6P86452 979 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 PTK2BQ14289 1009 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 MESDQ14696 234 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 CDR2LQ86X02 465 aaPredicted RBP5.45□□□□□ -1.54
SMG1-211ENST00000565324 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.45□□□□□ -1.541e-7■■■■■ 58.1
SMG1-211ENST00000565324 SNX19Q92543 992 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 SLC24A3Q9HC58 644 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 MBD2Q9UBB5 411 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 SFMBT1Q9UHJ3 866 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 ABCA5Q8WWZ7 1642 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 EYA2O00167 538 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 ORC4O43929 436 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 PLS3P13797 630 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 TBC1D1Q86TI0 1168 aaPredicted RBP5.45□□□□□ -1.54
SMG1-211ENST00000565324 TRIM69Q86WT6 500 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 NDUFAF2Q8N183 169 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 RBM17Q96I25 401 aaKnown RBP5.45□□□□□ -1.54
SMG1-211ENST00000565324 RBM41Q96IZ5 413 aaKnown RBP5.45□□□□□ -1.54
SMG1-211ENST00000565324 POLR3EQ9NVU0 708 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 ZNF839A8K0R7 811 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 PPP6R2O75170 966 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 MYCLP12524 364 aaPredicted RBP5.45□□□□□ -1.54
SMG1-211ENST00000565324 LRRC63Q05C16 580 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 CCDC85BQ15834 202 aaPredicted RBP5.45□□□□□ -1.54
SMG1-211ENST00000565324 IMPG1Q17R60 797 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 FAM26FQ5R3K3 315 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 FRA10AC1Q70Z53 315 aa5.45□□□□□ -1.54
SMG1-211ENST00000565324 PLD3Q8IV08 490 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms