RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 ATP6V0A1Q93050 837 aa16.87■□□□□ 0.29
USB1-210ENST00000565151 COL25A1Q9BXS0 654 aaPredicted RBP16.87■□□□□ 0.29
USB1-210ENST00000565151 USP26Q9BXU7 913 aa16.87■□□□□ 0.29
USB1-210ENST00000565151 SLC28A3Q9HAS3 691 aa16.87■□□□□ 0.29
USB1-210ENST00000565151 BARHL2Q9NY43 387 aa16.87■□□□□ 0.29
USB1-210ENST00000565151 TCF20Q9UGU0 1960 aaKnown RBP16.86■□□□□ 0.29
USB1-210ENST00000565151 NOP56O00567 594 aaKnown RBP16.86■□□□□ 0.29
USB1-210ENST00000565151 EDIL3O43854 480 aa16.86■□□□□ 0.29
USB1-210ENST00000565151 HMGB1P09429 215 aaKnown RBP16.86■□□□□ 0.29
USB1-210ENST00000565151 NAPAP54920 295 aa16.86■□□□□ 0.29
USB1-210ENST00000565151 CNKSR3Q6P9H4 555 aa16.86■□□□□ 0.29
USB1-210ENST00000565151 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.86■□□□□ 0.29
USB1-210ENST00000565151 NLRX1Q86UT6 975 aa16.86■□□□□ 0.29
USB1-210ENST00000565151 CCDC155Q8N6L0 562 aa16.86■□□□□ 0.29
USB1-210ENST00000565151 LMBR1Q8WVP7 490 aa16.86■□□□□ 0.29
USB1-210ENST00000565151 CRYGNQ8WXF5 182 aa16.86■□□□□ 0.29
USB1-210ENST00000565151 ZBTB10Q96DT7 871 aa16.86■□□□□ 0.29
USB1-210ENST00000565151 CERS4Q9HA82 394 aa16.86■□□□□ 0.29
USB1-210ENST00000565151 C17orf102A2RUQ5 167 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 SMCO2A6NFE2 343 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 SPDYE3A6NKU9 549 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 ACTN1P12814 892 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 TCF7P36402 384 aaPredicted RBP16.85■□□□□ 0.29
USB1-210ENST00000565151 THPOP40225 353 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 RCAN1P53805 252 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 TAP1Q03518 808 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 ITGB3BPQ13352 177 aaPredicted RBP16.85■□□□□ 0.29
USB1-210ENST00000565151 MTMR1Q13613 665 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 TOB2Q14106 344 aaPredicted RBP16.85■□□□□ 0.29
USB1-210ENST00000565151 PFKFB3Q16875 520 aaPredicted RBP16.85■□□□□ 0.29
USB1-210ENST00000565151 PPP2R2DQ66LE6 453 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 BLOC1S2Q6QNY1 142 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 RUFY4Q6ZNE9 571 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 PHOSPHO2Q8TCD6 241 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 PHKBQ93100 1093 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 SLC9A7Q96T83 725 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 MXRA8Q9BRK3 442 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 ANO3Q9BYT9 981 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 KCNH7Q9NS40 1196 aa16.85■□□□□ 0.29
USB1-210ENST00000565151 BAIAP3O94812 1187 aa16.84■□□□□ 0.29
USB1-210ENST00000565151 METAP2P50579 478 aaKnown RBP eCLIP16.84■□□□□ 0.29
USB1-210ENST00000565151 ADCY7P51828 1080 aa16.84■□□□□ 0.29
USB1-210ENST00000565151 EVCP57679 992 aa16.84■□□□□ 0.29
USB1-210ENST00000565151 MARCH8Q5T0T0 291 aa16.84■□□□□ 0.29
USB1-210ENST00000565151 KRT40Q6A162 431 aa16.84■□□□□ 0.29
USB1-210ENST00000565151 PPP1R18Q6NYC8 613 aa16.84■□□□□ 0.29
USB1-210ENST00000565151 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
USB1-210ENST00000565151 DBF4BQ8NFT6 615 aa16.84■□□□□ 0.29
USB1-210ENST00000565151 UIMC1Q96RL1 719 aa16.84■□□□□ 0.29
USB1-210ENST00000565151 LARP6Q9BRS8 491 aaKnown RBP16.84■□□□□ 0.29
USB1-210ENST00000565151 NCOA5Q9HCD5 579 aaKnown RBP16.84■□□□□ 0.29
USB1-210ENST00000565151 NAP1L2Q9ULW6 460 aaPredicted RBP16.84■□□□□ 0.29
USB1-210ENST00000565151 RSPH10B2B2RC85 870 aa16.83■□□□□ 0.28
USB1-210ENST00000565151 MEIS1O00470 390 aa16.83■□□□□ 0.28
USB1-210ENST00000565151 LGR5O75473 907 aa16.83■□□□□ 0.28
USB1-210ENST00000565151 RSPH10BP0C881 870 aa16.83■□□□□ 0.28
USB1-210ENST00000565151 SCG2P13521 617 aa16.83■□□□□ 0.28
USB1-210ENST00000565151 MARK3P27448 753 aa16.83■□□□□ 0.28
USB1-210ENST00000565151 PDIA3P30101 505 aaKnown RBP16.83■□□□□ 0.28
USB1-210ENST00000565151 SREBF1P36956 1147 aa16.83■□□□□ 0.28
USB1-210ENST00000565151 PLEKHG4Q58EX7 1191 aa16.83■□□□□ 0.28
USB1-210ENST00000565151 JAKMIP3Q5VZ66 844 aa16.83■□□□□ 0.28
USB1-210ENST00000565151 PPM1EQ8WY54 764 aa16.83■□□□□ 0.28
USB1-210ENST00000565151 SEPT1Q8WYJ6 367 aa16.83■□□□□ 0.28
USB1-210ENST00000565151 ZSWIM6Q9HCJ5 1215 aa16.83■□□□□ 0.28
USB1-210ENST00000565151 AGO4Q9HCK5 861 aaKnown RBP16.83■□□□□ 0.28
USB1-210ENST00000565151 COL4A6Q14031 1691 aa16.82■□□□□ 0.28
USB1-210ENST00000565151 IGLV3-22A0A075B6J6 115 aa16.82■□□□□ 0.28
USB1-210ENST00000565151 FAM86B1E9PN63 330 aa16.82■□□□□ 0.28
USB1-210ENST00000565151 PRPF3O43395 683 aaKnown RBP16.82■□□□□ 0.28
USB1-210ENST00000565151 PARNO95453 639 aaKnown RBP16.82■□□□□ 0.28
USB1-210ENST00000565151 CCNE2O96020 404 aa16.82■□□□□ 0.28
USB1-210ENST00000565151 CHRNA1P02708 482 aa16.82■□□□□ 0.28
USB1-210ENST00000565151 CTSHP09668 335 aa16.82■□□□□ 0.28
USB1-210ENST00000565151 FAM86B2P0C5J1 330 aa16.82■□□□□ 0.28
USB1-210ENST00000565151 ARHGAP4P98171 946 aa16.82■□□□□ 0.28
USB1-210ENST00000565151 CCDC85BQ15834 202 aaPredicted RBP16.82■□□□□ 0.28
USB1-210ENST00000565151 FAM26DQ5JW98 314 aa16.82■□□□□ 0.28
USB1-210ENST00000565151 GIMAP8Q8ND71 665 aaPredicted RBP16.82■□□□□ 0.28
USB1-210ENST00000565151 CDHR1Q96JP9 859 aa16.82■□□□□ 0.28
USB1-210ENST00000565151 TTC3P53804 2025 aa16.82■□□□□ 0.28
USB1-210ENST00000565151 KIAA1671Q9BY89 1806 aa16.82■□□□□ 0.28
USB1-210ENST00000565151 NFASCO94856 1347 aa16.81■□□□□ 0.28
USB1-210ENST00000565151 ABHD14A-ACY1A0A1B0GW23 586 aa16.81■□□□□ 0.28
USB1-210ENST00000565151 DHX15O43143 795 aaKnown RBP16.81■□□□□ 0.28
USB1-210ENST00000565151 LPXNO60711 386 aa16.81■□□□□ 0.28
USB1-210ENST00000565151 DTNBO60941 627 aa16.81■□□□□ 0.28
USB1-210ENST00000565151 REC8O95072 547 aa16.81■□□□□ 0.28
USB1-210ENST00000565151 IGFBP4P22692 258 aa16.81■□□□□ 0.28
USB1-210ENST00000565151 CCT2P78371 535 aaKnown RBP16.81■□□□□ 0.28
USB1-210ENST00000565151 MGAT3Q09327 533 aa16.81■□□□□ 0.28
USB1-210ENST00000565151 CEP55Q53EZ4 464 aa16.81■□□□□ 0.28
USB1-210ENST00000565151 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
USB1-210ENST00000565151 RASGRP4Q8TDF6 673 aa16.81■□□□□ 0.28
USB1-210ENST00000565151 GAS2L1Q99501 681 aaPredicted RBP16.81■□□□□ 0.28
USB1-210ENST00000565151 ZMYND12Q9H0C1 365 aa16.81■□□□□ 0.28
USB1-210ENST00000565151 BRWD1Q9NSI6 2320 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 EMSYQ7Z589 1322 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.8■□□□□ 0.28
USB1-210ENST00000565151 ESYT2A0FGR8 921 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms