RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 Q6ZPA2 131 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 STPG3Q8N7X2 389 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 PHOSPHO1Q8TCT1 267 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 FAM89AQ96GI7 184 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 SMOC1Q9H4F8 434 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 KCND1Q9NSA2 647 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 ASH2LQ9UBL3 628 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 NOP56O00567 594 aaKnown RBP6.72□□□□□ -1.33
CHD9-214ENST00000565119 KRT4P19013 534 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 CANXP27824 592 aaKnown RBP6.72□□□□□ -1.33
CHD9-214ENST00000565119 GIPRP48546 466 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 EIF6P56537 245 aaKnown RBP6.72□□□□□ -1.33
CHD9-214ENST00000565119 COL10A1Q03692 680 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 DUSP8Q13202 625 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 CSRP2Q16527 193 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 SKIDA1Q1XH10 827 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 RNF151Q2KHN1 245 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 ZNF394Q53GI3 561 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 ZNF808Q8N4W9 903 aaPredicted RBP6.72□□□□□ -1.33
CHD9-214ENST00000565119 APBA2Q99767 749 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 DPYSL5Q9BPU6 564 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 POLR3GLQ9BT43 218 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 GINM1Q9NU53 330 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 PCDHGB7Q9Y5F8 929 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 PCDHA2Q9Y5H9 948 aa6.72□□□□□ -1.33
CHD9-214ENST00000565119 DGKIO75912 1065 aa6.71□□□□□ -1.34
CHD9-214ENST00000565119 LCP1P13796 627 aa6.71□□□□□ -1.34
CHD9-214ENST00000565119 GRIN1Q05586 938 aa6.71□□□□□ -1.34
CHD9-214ENST00000565119 LSAMPQ13449 338 aa6.71□□□□□ -1.34
CHD9-214ENST00000565119 KREMEN2Q8NCW0 462 aa6.71□□□□□ -1.34
CHD9-214ENST00000565119 TTLL11Q8NHH1 800 aa6.71□□□□□ -1.34
CHD9-214ENST00000565119 OR14A2Q96R54 314 aa6.71□□□□□ -1.34
CHD9-214ENST00000565119 CLDND1Q9NY35 253 aa6.71□□□□□ -1.34
CHD9-214ENST00000565119 MEFVO15553 781 aaPredicted RBP6.7□□□□□ -1.34
CHD9-214ENST00000565119 RAMP2O60895 175 aa6.7□□□□□ -1.34
CHD9-214ENST00000565119 NOLC1Q14978 699 aaKnown RBP eCLIP6.7□□□□□ -1.34
CHD9-214ENST00000565119 ZNF568Q3ZCX4 644 aa6.7□□□□□ -1.34
CHD9-214ENST00000565119 VHLLQ6RSH7 139 aa6.7□□□□□ -1.34
CHD9-214ENST00000565119 BTN2A2Q8WVV5 523 aa6.7□□□□□ -1.34
CHD9-214ENST00000565119 CLEC4DQ8WXI8 215 aa6.7□□□□□ -1.34
CHD9-214ENST00000565119 CLIP3Q96DZ5 547 aa6.7□□□□□ -1.34
CHD9-214ENST00000565119 CHAMP1Q96JM3 812 aa6.7□□□□□ -1.34
CHD9-214ENST00000565119 EPB41L1Q9H4G0 881 aa6.7□□□□□ -1.34
CHD9-214ENST00000565119 MATN2O00339 956 aa6.69□□□□□ -1.34
CHD9-214ENST00000565119 TESK1Q15569 626 aa6.69□□□□□ -1.34
CHD9-214ENST00000565119 TAF7LQ5H9L4 462 aa6.69□□□□□ -1.34
CHD9-214ENST00000565119 PLA2G12BQ9BX93 195 aa6.69□□□□□ -1.34
CHD9-214ENST00000565119 CARD11Q9BXL7 1154 aa6.69□□□□□ -1.34
CHD9-214ENST00000565119 ZNF703Q9H7S9 590 aaPredicted RBP6.69□□□□□ -1.34
CHD9-214ENST00000565119 ARHGAP20Q9P2F6 1191 aa6.69□□□□□ -1.34
CHD9-214ENST00000565119 H0Y858 1186 aa6.68□□□□□ -1.34
CHD9-214ENST00000565119 TBX1O43435 398 aa6.68□□□□□ -1.34
CHD9-214ENST00000565119 CDC14BO60729 498 aa6.68□□□□□ -1.34
CHD9-214ENST00000565119 IL18BPO95998 194 aa6.68□□□□□ -1.34
CHD9-214ENST00000565119 ECI1P42126 302 aa6.68□□□□□ -1.34
CHD9-214ENST00000565119 PPP2R5EQ16537 467 aa6.68□□□□□ -1.34
CHD9-214ENST00000565119 TMEM87AQ8NBN3 555 aa6.68□□□□□ -1.34
CHD9-214ENST00000565119 PPP1R14AQ96A00 147 aa6.68□□□□□ -1.34
CHD9-214ENST00000565119 PRRX2Q99811 253 aa6.68□□□□□ -1.34
CHD9-214ENST00000565119 CDIP1Q9H305 208 aa6.68□□□□□ -1.34
CHD9-214ENST00000565119 CEP72Q9P209 647 aa6.68□□□□□ -1.34
CHD9-214ENST00000565119 SLC27A2O14975 620 aa6.67□□□□□ -1.34
CHD9-214ENST00000565119 BMP5P22003 454 aa6.67□□□□□ -1.34
CHD9-214ENST00000565119 LTBRP36941 435 aa6.67□□□□□ -1.34
CHD9-214ENST00000565119 COL9A2Q14055 689 aaPredicted RBP6.67□□□□□ -1.34
CHD9-214ENST00000565119 CCDC142Q17RM4 750 aa6.67□□□□□ -1.34
CHD9-214ENST00000565119 PRSS53Q2L4Q9 553 aa6.67□□□□□ -1.34
CHD9-214ENST00000565119 ACBD5Q5T8D3 534 aaPredicted RBP6.67□□□□□ -1.34
CHD9-214ENST00000565119 CYP4F22Q6NT55 531 aa6.67□□□□□ -1.34
CHD9-214ENST00000565119 TRIM48Q8IWZ4 208 aa6.67□□□□□ -1.34
CHD9-214ENST00000565119 RBM12BQ8IXT5 1001 aaKnown RBP6.67□□□□□ -1.34
CHD9-214ENST00000565119 ULK2Q8IYT8 1036 aa6.67□□□□□ -1.34
CHD9-214ENST00000565119 OR6P1Q8NGX9 317 aa6.67□□□□□ -1.34
CHD9-214ENST00000565119 TTPALQ9BTX7 342 aa6.67□□□□□ -1.34
CHD9-214ENST00000565119 IGSF5Q9NSI5 407 aa6.67□□□□□ -1.34
CHD9-214ENST00000565119 MAFKO60675 156 aa6.66□□□□□ -1.34
CHD9-214ENST00000565119 SCG5P05408 212 aa6.66□□□□□ -1.34
CHD9-214ENST00000565119 ERCC3P19447 782 aa6.66□□□□□ -1.34
CHD9-214ENST00000565119 FBLP22087 321 aaKnown RBP6.66□□□□□ -1.34
CHD9-214ENST00000565119 HIBADHP31937 336 aaKnown RBP6.66□□□□□ -1.34
CHD9-214ENST00000565119 ZNF76P36508 570 aa6.66□□□□□ -1.34
CHD9-214ENST00000565119 SOX9P48436 509 aa6.66□□□□□ -1.34
CHD9-214ENST00000565119 PFKPQ01813 784 aa6.66□□□□□ -1.34
CHD9-214ENST00000565119 FOXL1Q12952 345 aa6.66□□□□□ -1.34
CHD9-214ENST00000565119 DENND5AQ6IQ26 1287 aa6.66□□□□□ -1.34
CHD9-214ENST00000565119 PIP4K2CQ8TBX8 421 aa6.66□□□□□ -1.34
CHD9-214ENST00000565119 SLC2A4RGQ9NR83 387 aa6.66□□□□□ -1.34
CHD9-214ENST00000565119 TLR9Q9NR96 1032 aa6.66□□□□□ -1.34
CHD9-214ENST00000565119 EFR3BQ9Y2G0 817 aa6.66□□□□□ -1.34
CHD9-214ENST00000565119 REXO2Q9Y3B8 237 aaKnown RBP6.66□□□□□ -1.34
CHD9-214ENST00000565119 SNRPB2P08579 225 aaKnown RBP6.65□□□□□ -1.34
CHD9-214ENST00000565119 FAHP16930 419 aa6.65□□□□□ -1.34
CHD9-214ENST00000565119 HOXC12P31275 282 aa6.65□□□□□ -1.34
CHD9-214ENST00000565119 DNAJA1P31689 397 aaKnown RBP6.65□□□□□ -1.34
CHD9-214ENST00000565119 ZNF143P52747 638 aaPredicted RBP6.65□□□□□ -1.34
CHD9-214ENST00000565119 RACK1P63244 317 aaKnown RBP6.65□□□□□ -1.34
CHD9-214ENST00000565119 SF1Q15637 639 aaKnown RBP6.65□□□□□ -1.34
CHD9-214ENST00000565119 PPIL6Q8IXY8 311 aa6.65□□□□□ -1.34
CHD9-214ENST00000565119 TACO1Q9BSH4 297 aaKnown RBP6.65□□□□□ -1.34
CHD9-214ENST00000565119 SLC6A20Q9NP91 592 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms