RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 KCNJ2P63252 427 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 ARID5AQ03989 594 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 ALX1Q15699 326 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 CCDC178Q5BJE1 867 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 MREGQ8N565 214 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 SRBD1Q8N5C6 995 aaKnown RBP17.85■□□□□ 0.45
LINC00554-201ENST00000564841 MAB21L3Q8N8X9 362 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 CEP120Q8N960 986 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 AGAP1Q9UPQ3 857 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 KIF3CO14782 793 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 USP17L8P0C7I0 530 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 TDRD12Q587J7 1177 aaKnown RBP17.85■□□□□ 0.45
LINC00554-201ENST00000564841 CDCA2Q69YH5 1023 aaPredicted RBP17.85■□□□□ 0.45
LINC00554-201ENST00000564841 UIMC1Q96RL1 719 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 SAP30BPQ9UHR5 308 aaKnown RBP17.85■□□□□ 0.45
LINC00554-201ENST00000564841 C15orf41Q9Y2V0 281 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 SEC23AQ15436 765 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 CATIPQ7Z7H3 387 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 CCDC63Q8NA47 563 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 TNFRSF25Q93038 417 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 NOX5Q96PH1 765 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 PACSIN1Q9BY11 444 aa17.85■□□□□ 0.45
LINC00554-201ENST00000564841 TAF1DQ9H5J8 278 aaPredicted RBP17.85■□□□□ 0.45
LINC00554-201ENST00000564841 SPATS2LQ9NUQ6 558 aaKnown RBP17.85■□□□□ 0.45
LINC00554-201ENST00000564841 ONECUT3O60422 494 aaPredicted RBP17.84■□□□□ 0.45
LINC00554-201ENST00000564841 LACTB2Q53H82 288 aaPredicted RBP17.84■□□□□ 0.45
LINC00554-201ENST00000564841 CAPRIN2Q6IMN6 1127 aaKnown RBP17.84■□□□□ 0.45
LINC00554-201ENST00000564841 ARFGAP2Q8N6H7 521 aa17.84■□□□□ 0.45
LINC00554-201ENST00000564841 RUBCNQ92622 972 aa17.84■□□□□ 0.45
LINC00554-201ENST00000564841 PLCB1Q9NQ66 1216 aa17.84■□□□□ 0.45
LINC00554-201ENST00000564841 ATRNO75882 1429 aa17.84■□□□□ 0.45
LINC00554-201ENST00000564841 SMIM23A6NLE4 172 aa17.84■□□□□ 0.45
LINC00554-201ENST00000564841 KLRC1P26715 233 aa17.84■□□□□ 0.45
LINC00554-201ENST00000564841 KIF2BQ8N4N8 673 aa17.84■□□□□ 0.45
LINC00554-201ENST00000564841 SPAG5Q96R06 1193 aa17.84■□□□□ 0.45
LINC00554-201ENST00000564841 EBF2Q9HAK2 575 aa17.84■□□□□ 0.45
LINC00554-201ENST00000564841 PNPLA7Q6ZV29 1317 aa17.83■□□□□ 0.45
LINC00554-201ENST00000564841 CCT8L1PA6NM43 557 aa17.83■□□□□ 0.45
LINC00554-201ENST00000564841 CTNND1O60716 968 aaKnown RBP17.83■□□□□ 0.45
LINC00554-201ENST00000564841 LDHBP07195 334 aaKnown RBP17.83■□□□□ 0.45
LINC00554-201ENST00000564841 SLC8A3P57103 927 aa17.83■□□□□ 0.45
LINC00554-201ENST00000564841 WHAMMQ8TF30 809 aa17.83■□□□□ 0.45
LINC00554-201ENST00000564841 KANSL2Q9H9L4 492 aa17.83■□□□□ 0.45
LINC00554-201ENST00000564841 PNMA2Q9UL42 364 aa17.83■□□□□ 0.45
LINC00554-201ENST00000564841 BAZ2AQ9UIF9 1905 aaKnown RBP17.83■□□□□ 0.44
LINC00554-201ENST00000564841 DNAJC8O75937 253 aaPredicted RBP17.83■□□□□ 0.44
LINC00554-201ENST00000564841 FUT2Q10981 343 aa17.83■□□□□ 0.44
LINC00554-201ENST00000564841 KRT71Q3SY84 523 aa17.83■□□□□ 0.44
LINC00554-201ENST00000564841 RCSD1Q6JBY9 416 aa17.83■□□□□ 0.44
LINC00554-201ENST00000564841 KCNV2Q8TDN2 545 aa17.83■□□□□ 0.44
LINC00554-201ENST00000564841 HOOK2Q96ED9 719 aa17.83■□□□□ 0.44
LINC00554-201ENST00000564841 DYNLL2Q96FJ2 89 aa17.83■□□□□ 0.44
LINC00554-201ENST00000564841 TRIM31Q9BZY9 425 aa17.83■□□□□ 0.44
LINC00554-201ENST00000564841 DDX47Q9H0S4 455 aaKnown RBP17.83■□□□□ 0.44
LINC00554-201ENST00000564841 ARHGEF10LQ9HCE6 1279 aa17.83■□□□□ 0.44
LINC00554-201ENST00000564841 LRP5O75197 1615 aa17.83■□□□□ 0.44
LINC00554-201ENST00000564841 XBP1P17861 261 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 AP1ARQ63HQ0 302 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 SAAL1Q96ER3 474 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 RNF26Q9BY78 433 aaPredicted RBP17.82■□□□□ 0.44
LINC00554-201ENST00000564841 MYH6P13533 1939 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 C5orf60A6NFR6 353 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 KIF4AO95239 1232 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 DISC1Q9NRI5 854 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 ABCF3Q9NUQ8 709 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 DAPK3O43293 454 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 GOLGA8HP0CJ92 632 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 PDE4DQ08499 809 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 IFFO1Q0D2I5 559 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 MAPKAPK5Q8IW41 473 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 GIMAP8Q8ND71 665 aaPredicted RBP17.82■□□□□ 0.44
LINC00554-201ENST00000564841 TGFBRAP1Q8WUH2 860 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 P2RX5Q93086 422 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 INPP4AQ96PE3 977 aaPredicted RBP17.82■□□□□ 0.44
LINC00554-201ENST00000564841 ELAC2Q9BQ52 826 aaKnown RBP17.82■□□□□ 0.44
LINC00554-201ENST00000564841 CRNKL1Q9BZJ0 848 aaKnown RBP17.82■□□□□ 0.44
LINC00554-201ENST00000564841 TMEM60Q9H2L4 133 aa17.82■□□□□ 0.44
LINC00554-201ENST00000564841 RNF41Q9H4P4 317 aaPredicted RBP17.82■□□□□ 0.44
LINC00554-201ENST00000564841 KLHL33A6NCF5 533 aa17.81■□□□□ 0.44
LINC00554-201ENST00000564841 CALRP27797 417 aaKnown RBP17.81■□□□□ 0.44
LINC00554-201ENST00000564841 NBPF9Q3BBW0 867 aa17.81■□□□□ 0.44
LINC00554-201ENST00000564841 MIS18BP1Q6P0N0 1132 aa17.81■□□□□ 0.44
LINC00554-201ENST00000564841 STAG2Q8N3U4 1231 aa17.81■□□□□ 0.44
LINC00554-201ENST00000564841 RETREG2Q8NC44 543 aa17.81■□□□□ 0.44
LINC00554-201ENST00000564841 SH3RF3Q8TEJ3 882 aaPredicted RBP17.81■□□□□ 0.44
LINC00554-201ENST00000564841 DCP1AQ9NPI6 582 aaPredicted RBP17.81■□□□□ 0.44
LINC00554-201ENST00000564841 KCNK3O14649 394 aa17.81■□□□□ 0.44
LINC00554-201ENST00000564841 ORC4O43929 436 aa17.81■□□□□ 0.44
LINC00554-201ENST00000564841 SLC44A5Q8NCS7 719 aa17.81■□□□□ 0.44
LINC00554-201ENST00000564841 ZCWPW1Q9H0M4 648 aa17.81■□□□□ 0.44
LINC00554-201ENST00000564841 DPH5Q9H2P9 285 aa17.81■□□□□ 0.44
LINC00554-201ENST00000564841 KDM4CQ9H3R0 1056 aa17.81■□□□□ 0.44
LINC00554-201ENST00000564841 SIK3Q9Y2K2 1263 aa17.81■□□□□ 0.44
LINC00554-201ENST00000564841 ERICH1Q86X53 443 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 CELF4Q9BZC1 486 aaKnown RBP17.8■□□□□ 0.44
LINC00554-201ENST00000564841 NDST4Q9H3R1 872 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 STK38LQ9Y2H1 464 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 CD2APQ9Y5K6 639 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 MAP3K13O43283 966 aa17.8■□□□□ 0.44
LINC00554-201ENST00000564841 SMNDC1O75940 238 aaKnown RBP eCLIP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms