RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 CLRN3Q8NCR9 226 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 ARRDC4Q8NCT1 418 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 JDP2Q8WYK2 163 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 ELF4Q99607 663 aaPredicted RBP6.59□□□□□ -1.35
CDH1-207ENST00000564745 SMOC1Q9H4F8 434 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 ASH2LQ9UBL3 628 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 YBX2Q9Y2T7 364 aaKnown RBP6.59□□□□□ -1.35
CDH1-207ENST00000564745 PCDHB4Q9Y5E5 795 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 B3GALT1Q9Y5Z6 326 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 ATP23Q9Y6H3 246 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 TCRBV5S2A0A599 114 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 SRGAP3O43295 1099 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 MARCH6O60337 910 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 PARNO95453 639 aaKnown RBP6.58□□□□□ -1.36
CDH1-207ENST00000564745 ARL4AP40617 200 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 KIF11P52732 1056 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 GP2P55259 537 aaKnown RBP6.58□□□□□ -1.36
CDH1-207ENST00000564745 ERVFRD-1P60508 538 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 ADGRF1Q5T601 910 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 BROXQ5VW32 411 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 IQSEC1Q6DN90 963 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 RPTNQ6XPR3 784 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.58□□□□□ -1.36
CDH1-207ENST00000564745 DCP2Q8IU60 420 aaKnown RBP6.58□□□□□ -1.36
CDH1-207ENST00000564745 CMIPQ8IY22 773 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 EFHBQ8N7U6 833 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 FLAD1Q8NFF5 587 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 SEC14L1Q92503 715 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 DLG3Q92796 817 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 SLC5A5Q92911 643 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 CEP89Q96ST8 783 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 METTL14Q9HCE5 456 aaKnown RBP6.58□□□□□ -1.36
CDH1-207ENST00000564745 TOMM22Q9NS69 142 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 TRHDEQ9UKU6 1024 aa6.58□□□□□ -1.36
CDH1-207ENST00000564745 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.57□□□□□ -1.36
CDH1-207ENST00000564745 ACOT7O00154 380 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 GABRDO14764 452 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 CLASP2O75122 1294 aaKnown RBP6.57□□□□□ -1.36
CDH1-207ENST00000564745 ALDH1L1O75891 902 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 CYBBP04839 570 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 PTPN1P18031 435 aaKnown RBP6.57□□□□□ -1.36
CDH1-207ENST00000564745 EPHA5P54756 1037 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 TMEM132BQ14DG7 1078 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 DDB1Q16531 1140 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 BTBD8Q5XKL5 378 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 ESRP1Q6NXG1 681 aaKnown RBP6.57□□□□□ -1.36
CDH1-207ENST00000564745 PAQR3Q6TCH7 311 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 EP400NLQ6ZTU2 488 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 C11orf74Q86VG3 221 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 KIRREL1Q96J84 757 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 PUS7LQ9H0K6 701 aaKnown RBP6.57□□□□□ -1.36
CDH1-207ENST00000564745 AP5M1Q9H0R1 490 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 RIC8BQ9NVN3 520 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 ZNF652Q9Y2D9 606 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 SPO11Q9Y5K1 396 aa6.57□□□□□ -1.36
CDH1-207ENST00000564745 OAS3Q9Y6K5 1087 aaKnown RBP6.57□□□□□ -1.36
CDH1-207ENST00000564745 RASSF10A6NK89 507 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 BUB1BO60566 1050 aaPredicted RBP6.56□□□□□ -1.36
CDH1-207ENST00000564745 HIP1RO75146 1068 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 C4BPAP04003 597 aaKnown RBP6.56□□□□□ -1.36
CDH1-207ENST00000564745 AFMP43652 599 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 SMAD3P84022 425 aaKnown RBP6.56□□□□□ -1.36
CDH1-207ENST00000564745 PRR5P85299 388 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 OCRLQ01968 901 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 RAB3GAP1Q15042 981 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 TTF1Q15361 905 aaPredicted RBP6.56□□□□□ -1.36
CDH1-207ENST00000564745 ZNF174Q15697 407 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 SMAD2Q15796 467 aaKnown RBP6.56□□□□□ -1.36
CDH1-207ENST00000564745 CHRNA2Q15822 529 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 ARTNQ5T4W7 220 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 NLGN4XQ8N0W4 816 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 INTS4Q96HW7 963 aaKnown RBP6.56□□□□□ -1.36
CDH1-207ENST00000564745 YIPF4Q9BSR8 244 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 PCIF1Q9H4Z3 704 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 ZMAT4Q9H898 229 aa6.56□□□□□ -1.36
CDH1-207ENST00000564745 TNKSO95271 1327 aa6.55□□□□□ -1.36
CDH1-207ENST00000564745 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.55□□□□□ -1.36
CDH1-207ENST00000564745 TMEM253P0C7T8 217 aa6.55□□□□□ -1.36
CDH1-207ENST00000564745 ERVK-21P61565 698 aa6.55□□□□□ -1.36
CDH1-207ENST00000564745 TERF2Q15554 542 aa6.55□□□□□ -1.36
CDH1-207ENST00000564745 CATSPEREQ5SY80 951 aa6.55□□□□□ -1.36
CDH1-207ENST00000564745 SYDE2Q5VT97 1194 aa6.55□□□□□ -1.36
CDH1-207ENST00000564745 CYP4F22Q6NT55 531 aa6.55□□□□□ -1.36
CDH1-207ENST00000564745 CBLL1Q75N03 491 aa6.55□□□□□ -1.36
CDH1-207ENST00000564745 CBARPQ8N350 705 aaPredicted RBP6.55□□□□□ -1.36
CDH1-207ENST00000564745 PEX11GQ96HA9 241 aa6.55□□□□□ -1.36
CDH1-207ENST00000564745 ZFP64Q9NPA5 681 aa6.55□□□□□ -1.36
CDH1-207ENST00000564745 KCNH7Q9NS40 1196 aa6.55□□□□□ -1.36
CDH1-207ENST00000564745 KLHL14Q9P2G3 628 aa6.55□□□□□ -1.36
CDH1-207ENST00000564745 DBR1Q9UK59 544 aaKnown RBP6.55□□□□□ -1.36
CDH1-207ENST00000564745 PRAMEF25A6NGN4 478 aa6.54□□□□□ -1.36
CDH1-207ENST00000564745 MAFKO60675 156 aa6.54□□□□□ -1.36
CDH1-207ENST00000564745 ULK1O75385 1050 aa6.54□□□□□ -1.36
CDH1-207ENST00000564745 MPOP05164 745 aa6.54□□□□□ -1.36
CDH1-207ENST00000564745 THBS2P35442 1172 aa6.54□□□□□ -1.36
CDH1-207ENST00000564745 IARSP41252 1262 aaKnown RBP6.54□□□□□ -1.36
CDH1-207ENST00000564745 MCL1Q07820 350 aa6.54□□□□□ -1.36
CDH1-207ENST00000564745 ABCB5Q2M3G0 1257 aa6.54□□□□□ -1.36
CDH1-207ENST00000564745 PLEKHN1Q494U1 663 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms