RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 KLRC3Q07444 240 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 GRB10Q13322 594 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 QRICH1Q2TAL8 776 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 CCDC93Q567U6 631 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 HYIQ5T013 277 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 TTI2Q6NXR4 508 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 TRIM65Q6PJ69 517 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 SYT10Q6XYQ8 523 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 UNC13DQ70J99 1090 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 IRF2BP1Q8IU81 584 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 TMTC1Q8IUR5 882 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 NME8Q8N427 588 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 PLPP7Q8NBV4 271 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 LRRC15Q8TF66 581 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 LARP4BQ92615 738 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 AMNQ9BXJ7 453 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 BLOC1S4Q9NUP1 217 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 TMOD2Q9NZR1 351 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 HDAC9Q9UKV0 1011 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 PCDHA12Q9UN75 941 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 PCDHA1Q9Y5I3 950 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 ZBBXA8MT70 800 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 SLC37A4O43826 429 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 TDP2O95551 362 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 FGFR1OPO95684 399 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 VIL1P09327 827 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 CCDC175P0C221 793 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 DNM2P50570 870 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 CACNB3P54284 484 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 ASIC1P78348 528 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 EZH2Q15910 746 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 CDC37Q16543 378 aaPredicted RBP8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 FKBP1CQ5VVH2 108 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 CENPPQ6IPU0 288 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 SLFN12Q8IYM2 578 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 TTLL6Q8N841 843 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 P2RX5Q93086 422 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 IQCDQ96DY2 449 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 PRMT6Q96LA8 375 aaPredicted RBP8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 TRIM47Q96LD4 638 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 MBOAT7Q96N66 472 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 PLIN2Q99541 437 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 VPS16Q9H269 839 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 TDRD3Q9H7E2 651 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 KDM3AQ9Y4C1 1321 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 PSME4Q14997 1843 aa8.08□□□□□ -1.12
HERPUD1-209ENST00000564678 MYH7BA7E2Y1 1941 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 YDJCA8MPS7 323 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 LGALS16A8MUM7 142 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 TBX3O15119 743 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 ABCB11O95342 1321 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 GYPCP04921 128 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 CASP14P31944 242 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 CCT6AP40227 531 aaKnown RBP8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 MMP14P50281 582 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 UBXN1Q04323 297 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 GOLGA8FQ08AF8 430 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 GOLGA8DPQ0D2H9 430 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 TMEM119Q4V9L6 283 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 GUF1Q8N442 669 aaKnown RBP8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 ZNF507Q8TCN5 953 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 SNX29Q8TEQ0 813 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 SLC16A10Q8TF71 515 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 FAM151AQ8WW52 585 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 JDP2Q8WYK2 163 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 RAD54LQ92698 747 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 HAS1Q92839 578 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 PNMA5Q96PV4 448 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 NUP58Q9BVL2 599 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 TMEM134Q9H6X4 195 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 BMP2KQ9NSY1 1161 aaPredicted RBP8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 PNMA2Q9UL42 364 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 MAPK8IP1Q9UQF2 711 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 PCDHAC2Q9Y5I4 1007 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 MEIS2O14770 477 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 BMP3P12645 472 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 DAB2P98082 770 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 NCBP1Q09161 790 aaKnown RBP8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 STK4Q13043 487 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 UBE2SQ16763 222 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 PTPN21Q16825 1174 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 FBXO11Q86XK2 927 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 CSGALNACT2Q8N6G5 542 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 MB21D1Q8N884 522 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 CRYGNQ8WXF5 182 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 CSRNP1Q96S65 589 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 KCNMB3Q9NPA1 279 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 DNAAF2Q9NVR5 837 aaKnown RBP8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 TAB2Q9NYJ8 693 aa8.07□□□□□ -1.12
HERPUD1-209ENST00000564678 TRIM49BA6NDI0 452 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 MYMKA6NI61 221 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 SFI1A8K8P3 1242 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 NDUFB10O96000 172 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 FXR1P51114 621 aaKnown RBP eCLIP8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 PMS1P54277 932 aaKnown RBP8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 LRRC63Q05C16 580 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 EHHADHQ08426 723 aa8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 NAA30Q147X3 362 aaPredicted RBP8.06□□□□□ -1.12
HERPUD1-209ENST00000564678 SYDE2Q5VT97 1194 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms