RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 CRYGNQ8WXF5 182 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 UIMC1Q96RL1 719 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 C16orf70Q9BSU1 422 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 PHF20Q9BVI0 1012 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 TUT1Q9H6E5 874 aaKnown RBP11.3□□□□□ -0.6
CDH1-206ENST00000564676 SH2B1Q9NRF2 756 aaPredicted RBP11.3□□□□□ -0.6
CDH1-206ENST00000564676 GJB4Q9NTQ9 266 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 SLC9A2Q9UBY0 812 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 GTF2IRD1Q9UHL9 959 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 ZNF215Q9UL58 517 aaPredicted RBP11.3□□□□□ -0.6
CDH1-206ENST00000564676 CCDC194A0A1B0GVG4 234 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 GSTTP1A0A1W2PQM5 241 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 DDX39AO00148 427 aaKnown RBP11.29□□□□□ -0.6
CDH1-206ENST00000564676 CIITAP33076 1130 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 TCF7P36402 384 aaPredicted RBP11.29□□□□□ -0.6
CDH1-206ENST00000564676 USP11P51784 963 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 SETQ01105 290 aaPredicted RBP11.29□□□□□ -0.6
CDH1-206ENST00000564676 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 PPIGQ13427 754 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDH1-206ENST00000564676 TRIM29Q14134 588 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 NONOQ15233 471 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDH1-206ENST00000564676 NPY5RQ15761 445 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 GDF6Q6KF10 455 aaPredicted RBP11.29□□□□□ -0.6
CDH1-206ENST00000564676 KRT25Q7Z3Z0 450 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 TRIM50Q86XT4 487 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 RETREG2Q8NC44 543 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 GLG1Q92896 1179 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 TBC1D32Q96NH3 1257 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 ZNF577Q9BSK1 485 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 NOC4LQ9BVI4 516 aaKnown RBP11.29□□□□□ -0.6
CDH1-206ENST00000564676 BRMS1Q9HCU9 246 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 KAT6AQ92794 2004 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 NFASCO94856 1347 aa11.29□□□□□ -0.6
CDH1-206ENST00000564676 LTBP2Q14767 1821 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 IGLV3-22A0A075B6J6 115 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 M0R2N6 131 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 IPO5O00410 1097 aaKnown RBP11.28□□□□□ -0.6
CDH1-206ENST00000564676 CSF2RAP15509 400 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 KRT2P35908 639 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 CCL23P55773 120 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 ACTR2P61160 394 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 ITGB3BPQ13352 177 aaPredicted RBP11.28□□□□□ -0.6
CDH1-206ENST00000564676 BFSP2Q13515 415 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 INF2Q27J81 1249 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 IL27Q8NEV9 243 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 LLPHQ9BRT6 129 aaKnown RBP11.28□□□□□ -0.6
CDH1-206ENST00000564676 BACH2Q9BYV9 841 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 SMARCAD1Q9H4L7 1026 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 AZI2Q9H6S1 392 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 TCEAL9Q9UHQ7 104 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 TRIP12Q14669 1992 aaPredicted RBP11.28□□□□□ -0.6
CDH1-206ENST00000564676 UMODL1Q5DID0 1318 aa11.28□□□□□ -0.6
CDH1-206ENST00000564676 C17orf102A2RUQ5 167 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 SMIM10L2AP0DMW4 78 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 SMIM10L2BP0DMW5 78 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 ACRP10323 421 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 GNAT1P11488 350 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 MARK3P27448 753 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 EPHB4P54760 987 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 ZNF200P98182 395 aaPredicted RBP11.27□□□□□ -0.61
CDH1-206ENST00000564676 SHHQ15465 462 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 C9orf50Q5SZB4 431 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 PIK3AP1Q6ZUJ8 805 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 CCDC155Q8N6L0 562 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 FAM184AQ8NB25 1140 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 OXER1Q8TDS5 423 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 ATP6V0A1Q93050 837 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 TBC1D22BQ9NU19 505 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 ERAP1Q9NZ08 941 aa11.27□□□□□ -0.61
CDH1-206ENST00000564676 BACH1O14867 736 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 EDIL3O43854 480 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 TDP2O95551 362 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 MCM2P49736 904 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 STAT5BP51692 787 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 HMGN5P82970 282 aaKnown RBP11.26□□□□□ -0.61
CDH1-206ENST00000564676 SAFBQ15424 915 aaKnown RBP eCLIP11.26□□□□□ -0.61
CDH1-206ENST00000564676 LETM2Q2VYF4 491 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 KRT40Q6A162 431 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 MIS18BP1Q6P0N0 1132 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 NEK8Q86SG6 692 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 RPUSD2Q8IZ73 545 aaKnown RBP11.26□□□□□ -0.61
CDH1-206ENST00000564676 CAGE1Q8TC20 777 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 SCLYQ96I15 445 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 C8orf76Q96K31 380 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 RNPC3Q96LT9 517 aaKnown RBP11.26□□□□□ -0.61
CDH1-206ENST00000564676 WNT8AQ9H1J5 351 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 RNPEPQ9H4A4 650 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 IL23AQ9NPF7 189 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 SETD4Q9NVD3 440 aa11.26□□□□□ -0.61
CDH1-206ENST00000564676 CYP3A7-CYP3A51PA0A087WV96 503 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 MSH4O15457 936 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 DHX15O43143 795 aaKnown RBP11.25□□□□□ -0.61
CDH1-206ENST00000564676 GAS7O60861 476 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 LGR5O75473 907 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 CCNE2O96020 404 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 MMP1P03956 469 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 IQCF3P0C7M6 154 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 CYP3A7P24462 503 aa11.25□□□□□ -0.61
CDH1-206ENST00000564676 FXR1P51114 621 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDH1-206ENST00000564676 KRT76Q01546 638 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms