RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 UBE2SQ16763 222 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 AAK1Q2M2I8 961 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 FAM26DQ5JW98 314 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 UTP14CQ5TAP6 766 aaKnown RBP17.17■□□□□ 0.34
SPG7-210ENST00000564409 WWC2Q6AWC2 1192 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 MCTP2Q6DN12 878 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 TAF2Q6P1X5 1199 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 RAB11FIP4Q86YS3 637 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 LMBR1Q8WVP7 490 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 APBB2Q92870 758 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 SETD4Q9NVD3 440 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 BARHL2Q9NY43 387 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 LMCD1Q9NZU5 365 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 BRPF3Q9ULD4 1205 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 INSL6Q9Y581 213 aa17.17■□□□□ 0.34
SPG7-210ENST00000564409 V9GY48 417 aaPredicted RBP17.17■□□□□ 0.34
SPG7-210ENST00000564409 SPTBN5Q9NRC6 3674 aaKnown RBP17.16■□□□□ 0.34
SPG7-210ENST00000564409 KLF18A0A0U1RQI7 1052 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 GOLGA8AA7E2F4 631 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 GOLGA8BA8MQT2 603 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 ATP9AO75110 1047 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 AP3B2Q13367 1082 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 MKRN4PQ13434 485 aaPredicted RBP17.16■□□□□ 0.34
SPG7-210ENST00000564409 ADCK5Q3MIX3 580 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 RSPH3Q86UC2 560 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 TRIM50Q86XT4 487 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 FBXL16Q8N461 479 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 DBF4BQ8NFT6 615 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 ARNTL2Q8WYA1 636 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 CCDC136Q96JN2 1154 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 ASB2Q96Q27 587 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 MXRA8Q9BRK3 442 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 MTCH2Q9Y6C9 303 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 TTC28Q96AY4 2481 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 NFASCO94856 1347 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 NCOR1O75376 2440 aa17.16■□□□□ 0.34
SPG7-210ENST00000564409 SIP14410 1827 aa17.15■□□□□ 0.34
SPG7-210ENST00000564409 GSTTP1A0A1W2PQM5 241 aa17.15■□□□□ 0.34
SPG7-210ENST00000564409 EPB41L2O43491 1005 aaKnown RBP17.15■□□□□ 0.34
SPG7-210ENST00000564409 REC8O95072 547 aa17.15■□□□□ 0.34
SPG7-210ENST00000564409 ARHGAP4P98171 946 aa17.15■□□□□ 0.34
SPG7-210ENST00000564409 SP4Q02446 784 aa17.15■□□□□ 0.34
SPG7-210ENST00000564409 GLG1Q92896 1179 aa17.15■□□□□ 0.34
SPG7-210ENST00000564409 TGS1Q96RS0 853 aaKnown RBP17.15■□□□□ 0.34
SPG7-210ENST00000564409 SDF4Q9BRK5 362 aa17.15■□□□□ 0.34
SPG7-210ENST00000564409 JPH1Q9HDC5 661 aaPredicted RBP17.15■□□□□ 0.34
SPG7-210ENST00000564409 KCNH7Q9NS40 1196 aa17.15■□□□□ 0.34
SPG7-210ENST00000564409 TRANK1O15050 2925 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 SMCO2A6NFE2 343 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 RRN3P2A6NIE6 340 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 STXBP3O00186 592 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 HSPA4P34932 840 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 ERVK-21P61565 698 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 PPFIA1Q13136 1202 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 TCTN1Q2MV58 587 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 CEP55Q53EZ4 464 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 NIPA1Q7RTP0 329 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 SKAP1Q86WV1 359 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 IL27Q8NEV9 243 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 CCDC12Q8WUD4 166 aaPredicted RBP17.14■□□□□ 0.33
SPG7-210ENST00000564409 TCEANC2Q96MN5 208 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 AZI2Q9H6S1 392 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 CERS4Q9HA82 394 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 PRDM6Q9NQX0 595 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 FAM217BQ9NTX9 383 aaPredicted RBP17.14■□□□□ 0.33
SPG7-210ENST00000564409 SLC9A2Q9UBY0 812 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 COG5Q9UP83 839 aa17.14■□□□□ 0.33
SPG7-210ENST00000564409 VCANP13611 3396 aa17.13■□□□□ 0.33
SPG7-210ENST00000564409 ESYT2A0FGR8 921 aa17.13■□□□□ 0.33
SPG7-210ENST00000564409 MBLAC1A4D2B0 266 aaPredicted RBP17.13■□□□□ 0.33
SPG7-210ENST00000564409 PSMA5P28066 241 aa17.13■□□□□ 0.33
SPG7-210ENST00000564409 SREBF1P36956 1147 aa17.13■□□□□ 0.33
SPG7-210ENST00000564409 SLC26A2P50443 739 aa17.13■□□□□ 0.33
SPG7-210ENST00000564409 METAP2P50579 478 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPG7-210ENST00000564409 HTRA4P83105 476 aaPredicted RBP17.13■□□□□ 0.33
SPG7-210ENST00000564409 PFKFB3Q16875 520 aaPredicted RBP17.13■□□□□ 0.33
SPG7-210ENST00000564409 BLOC1S2Q6QNY1 142 aa17.13■□□□□ 0.33
SPG7-210ENST00000564409 FAM43BQ6ZT52 329 aaPredicted RBP17.13■□□□□ 0.33
SPG7-210ENST00000564409 ANO3Q9BYT9 981 aa17.13■□□□□ 0.33
SPG7-210ENST00000564409 TUBE1Q9UJT0 475 aa17.13■□□□□ 0.33
SPG7-210ENST00000564409 NID2Q14112 1375 aa17.13■□□□□ 0.33
SPG7-210ENST00000564409 LCHNA4D1U4 455 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 LINC01553A4QN01 128 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 EPOPA6NHQ4 379 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 MEIS1O00470 390 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 ARHGEF15O94989 841 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 SCG2P13521 617 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 CDC27P30260 824 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 CLK2P49760 499 aaKnown RBP17.12■□□□□ 0.33
SPG7-210ENST00000564409 GRB10Q13322 594 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 GRIK4Q16099 956 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 TYW1BQ6NUM6 668 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 PLPPR4Q7Z2D5 763 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 MICALL1Q8N3F8 863 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 TOP1MTQ969P6 601 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 JAKMIP1Q96N16 626 aaKnown RBP17.12■□□□□ 0.33
SPG7-210ENST00000564409 SAMD11Q96NU1 681 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 IFIH1Q9BYX4 1025 aaKnown RBP17.12■□□□□ 0.33
SPG7-210ENST00000564409 TELO2Q9Y4R8 837 aa17.12■□□□□ 0.33
SPG7-210ENST00000564409 COL4A6Q14031 1691 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms